RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 DOPEY1Q5JWR5 2465 aa12.93□□□□□ -0.34
RTCA-203ENST00000370128 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
RTCA-203ENST00000370128 LINC00643Q86TS7 51 aa12.92□□□□□ -0.34
RTCA-203ENST00000370128 DSCR8Q96T75 97 aa12.92□□□□□ -0.34
RTCA-203ENST00000370128 PHLDA3Q9Y5J5 127 aa12.92□□□□□ -0.34
RTCA-203ENST00000370128 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.92□□□□□ -0.343e-9■■■■■ 27.6
RTCA-203ENST00000370128 GNRH2O43555 120 aa12.92□□□□□ -0.34
RTCA-203ENST00000370128 SEC61GP60059 68 aa12.92□□□□□ -0.34
RTCA-203ENST00000370128 Q1RN00 199 aa12.92□□□□□ -0.34
RTCA-203ENST00000370128 C14orf178Q8N769 122 aaPredicted RBP12.92□□□□□ -0.34
RTCA-203ENST00000370128 PYGO1Q9Y3Y4 419 aa12.92□□□□□ -0.34
RTCA-203ENST00000370128 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
RTCA-203ENST00000370128 RNASE3P12724 160 aaKnown RBP12.91□□□□□ -0.34
RTCA-203ENST00000370128 DPH3P1Q9H4G8 78 aa12.91□□□□□ -0.34
RTCA-203ENST00000370128 CSMD2Q7Z408 3487 aa12.91□□□□□ -0.34
RTCA-203ENST00000370128 USP9XQ93008 2570 aaPredicted RBP12.91□□□□□ -0.34
RTCA-203ENST00000370128 MED14OSP0DP75 135 aa12.91□□□□□ -0.34
RTCA-203ENST00000370128 CRYBG3Q68DQ2 2970 aa12.9□□□□□ -0.34
RTCA-203ENST00000370128 CXCL5P42830 114 aa12.9□□□□□ -0.34
RTCA-203ENST00000370128 SUMO2P61956 95 aaKnown RBP12.9□□□□□ -0.34
RTCA-203ENST00000370128 C5orf38Q86SI9 138 aa12.9□□□□□ -0.34
RTCA-203ENST00000370128 C1orf43Q9BWL3 253 aa12.9□□□□□ -0.34
RTCA-203ENST00000370128 K7EMT4 169 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 ATOX1O00244 68 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 SMCR5Q8TEV8 140 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 TOMM6Q96B49 74 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 RPL39LQ96EH5 51 aaKnown RBP12.89□□□□□ -0.35
RTCA-203ENST00000370128 BEX4Q9NWD9 120 aaPredicted RBP12.89□□□□□ -0.35
RTCA-203ENST00000370128 CSPG4Q6UVK1 2322 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 CACNA1AO00555 2505 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 TRIAP1O43715 76 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 PSMB8P28062 276 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 DCANP1Q8TF63 244 aa12.89□□□□□ -0.35
RTCA-203ENST00000370128 IGSF10Q6WRI0 2623 aa12.88□□□□□ -0.35
RTCA-203ENST00000370128 IGHV4-59P01825 116 aa12.88□□□□□ -0.35
RTCA-203ENST00000370128 ZNF580Q9UK33 172 aa12.88□□□□□ -0.35
RTCA-203ENST00000370128 KLLNB2CW77 178 aa12.88□□□□□ -0.35
RTCA-203ENST00000370128 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
RTCA-203ENST00000370128 HIST1H4AP62805 103 aaKnown RBP12.88□□□□□ -0.35
RTCA-203ENST00000370128 ORMDL2Q53FV1 153 aa12.87□□□□□ -0.35
RTCA-203ENST00000370128 MGPP08493 103 aa12.87□□□□□ -0.35
RTCA-203ENST00000370128 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
RTCA-203ENST00000370128 C10orf99Q6UWK7 81 aa12.87□□□□□ -0.35
RTCA-203ENST00000370128 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
RTCA-203ENST00000370128 UTP20O75691 2785 aaKnown RBP12.86□□□□□ -0.35
RTCA-203ENST00000370128 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.86□□□□□ -0.35
RTCA-203ENST00000370128 NXPH4O95158 308 aa12.86□□□□□ -0.35
RTCA-203ENST00000370128 MUC4Q99102 2169 aa12.86□□□□□ -0.35
RTCA-203ENST00000370128 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
RTCA-203ENST00000370128 DSCR9P59020 149 aa12.85□□□□□ -0.35
RTCA-203ENST00000370128 TSPEAR-AS2P59090 65 aa12.85□□□□□ -0.35
RTCA-203ENST00000370128 RS1O15537 224 aa12.85□□□□□ -0.35
RTCA-203ENST00000370128 RNF152Q8N8N0 203 aa12.85□□□□□ -0.35
RTCA-203ENST00000370128 AMELXQ99217 191 aa12.84□□□□□ -0.35
RTCA-203ENST00000370128 KIF25-AS1Q9Y6Z4 181 aa12.84□□□□□ -0.35
RTCA-203ENST00000370128 LINC00315P59091 139 aa12.84□□□□□ -0.35
RTCA-203ENST00000370128 SDIM1Q6ZPB5 146 aa12.84□□□□□ -0.35
RTCA-203ENST00000370128 LINC00336Q6ZUF6 198 aa12.84□□□□□ -0.35
RTCA-203ENST00000370128 TMEM223A0PJW6 202 aa12.83□□□□□ -0.36
RTCA-203ENST00000370128 C11orf86A6NJI1 115 aa12.83□□□□□ -0.36
RTCA-203ENST00000370128 LINC01356Q8N9X3 169 aa12.83□□□□□ -0.36
RTCA-203ENST00000370128 A0A096LNT2 108 aa12.82□□□□□ -0.36
RTCA-203ENST00000370128 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
RTCA-203ENST00000370128 UPK3BQ9BT76 320 aa12.82□□□□□ -0.36
RTCA-203ENST00000370128 PFN2P35080 140 aa12.82□□□□□ -0.36
RTCA-203ENST00000370128 C2orf66Q6UXQ4 117 aa12.82□□□□□ -0.36
RTCA-203ENST00000370128 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
RTCA-203ENST00000370128 PPP1R17O96001 155 aa12.81□□□□□ -0.36
RTCA-203ENST00000370128 MUSTN1Q8IVN3 82 aa12.81□□□□□ -0.36
RTCA-203ENST00000370128 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
RTCA-203ENST00000370128 IGLV4-69A0A075B6H9 119 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 IGHV4OR15-8A0A075B7B6 117 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 A0A087WW49 117 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 TMEM89A2RUT3 159 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 J3QQQ9 107 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 MAPK1IP1LQ8NDC0 245 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 ICOSQ9Y6W8 199 aa12.8□□□□□ -0.36
RTCA-203ENST00000370128 MYO18BQ8IUG5 2567 aa12.79□□□□□ -0.36
RTCA-203ENST00000370128 LST1O00453 97 aa12.79□□□□□ -0.36
RTCA-203ENST00000370128 V9GYY9 64 aa12.79□□□□□ -0.36
RTCA-203ENST00000370128 FBN2P35556 2912 aa12.78□□□□□ -0.36
RTCA-203ENST00000370128 COX6CP09669 75 aa12.78□□□□□ -0.36
RTCA-203ENST00000370128 ZNF415Q09FC8 603 aa12.78□□□□□ -0.36
RTCA-203ENST00000370128 USP9YO00507 2555 aaPredicted RBP12.78□□□□□ -0.36
RTCA-203ENST00000370128 ZANQ9Y493 2812 aa12.78□□□□□ -0.36
RTCA-203ENST00000370128 A0A0J9YX75 114 aa12.78□□□□□ -0.36
RTCA-203ENST00000370128 SERP2Q8N6R1 65 aa12.78□□□□□ -0.36
RTCA-203ENST00000370128 RPL18AQ02543 176 aaKnown RBP12.77□□□□□ -0.37
RTCA-203ENST00000370128 SUMO4Q6EEV6 95 aa12.77□□□□□ -0.37
RTCA-203ENST00000370128 A0A087WWL8 130 aa12.77□□□□□ -0.37
RTCA-203ENST00000370128 K7EQG2 157 aa12.77□□□□□ -0.37
RTCA-203ENST00000370128 LGALS3P17931 250 aaKnown RBP12.77□□□□□ -0.37
RTCA-203ENST00000370128 CLEC2BQ92478 149 aa12.77□□□□□ -0.37
RTCA-203ENST00000370128 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
RTCA-203ENST00000370128 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
RTCA-203ENST00000370128 POLR2KP53803 58 aaKnown RBP12.76□□□□□ -0.37
RTCA-203ENST00000370128 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
RTCA-203ENST00000370128 SNRPD3P62318 126 aaKnown RBP12.76□□□□□ -0.37
RTCA-203ENST00000370128 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms