RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 COX7CP15954 63 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 ZNF706Q9Y5V0 76 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-203ENST00000360280 REG3AQ06141 175 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 C5orf56Q8N8D9 126 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 FAM167A-AS1Q96KT0 104 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 K7EMT4 169 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 C3orf84H3BNL1 204 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 IGKV1-17P01599 117 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 DEFB135Q30KP9 77 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 ADAMTS20P59510 1910 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 IGKV2-24A0A0C4DH68 120 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 SPRY2O43597 315 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
VPS13A-203ENST00000360280 TRIAP1O43715 76 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 ZNF503-AS2A6NEH8 195 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 INSL3P51460 131 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 LINC00269Q8N2A0 174 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 Q8N9W7 124 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 A0A0J9YWU9 116 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 LOXL1Q08397 574 aaPredicted RBP7.1□□□□□ -1.27
VPS13A-203ENST00000360280 FAM208BQ5VWN6 2430 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 DHRS4-AS1Q9P1J3 65 aa7.1□□□□□ -1.27
VPS13A-203ENST00000360280 SCXQ7RTU7 201 aa7.09□□□□□ -1.27
VPS13A-203ENST00000360280 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.27
VPS13A-203ENST00000360280 NEXN-AS1Q8NBZ9 246 aa7.09□□□□□ -1.27
VPS13A-203ENST00000360280 UBE2D2P62837 147 aa7.09□□□□□ -1.27
VPS13A-203ENST00000360280 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
VPS13A-203ENST00000360280 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
VPS13A-203ENST00000360280 C7orf33Q8WU49 177 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 FAM222AQ5U5X8 452 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 FAM19A1Q7Z5A9 133 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 ESM1Q9NQ30 184 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 A0A087WZ39 114 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 NAV3Q8IVL0 2385 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 IGKV1D-37A0A075B6S9 117 aa7.08□□□□□ -1.28
VPS13A-203ENST00000360280 PRSS33Q8NF86 280 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 TMEM223A0PJW6 202 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 A0A0J9YX75 114 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 MIFP14174 115 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 CTSZQ9UBR2 303 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 C19orf71A6NCJ1 209 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 COX17Q14061 63 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 CHCHD10Q8WYQ3 142 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-203ENST00000360280 SMAD5-AS1Q9Y6J3 95 aa7.07□□□□□ -1.28
VPS13A-203ENST00000360280 SLX1AQ9BQ83 275 aa7.06□□□□□ -1.28
VPS13A-203ENST00000360280 WFDC10AQ9H1F0 79 aa7.06□□□□□ -1.28
VPS13A-203ENST00000360280 CRYGDP07320 174 aa7.06□□□□□ -1.28
VPS13A-203ENST00000360280 PRAC2D3DTV9 90 aa7.06□□□□□ -1.28
VPS13A-203ENST00000360280 A0A1B0GXF2 115 aa7.06□□□□□ -1.28
VPS13A-203ENST00000360280 TRBV6-5A0A0K0K1A5 114 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 DEFB113Q30KQ7 82 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 PATE2Q6UY27 113 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 LRCOL1A6NCL2 159 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 LINC00694P0DN24 101 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 RSPO1Q2MKA7 263 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-203ENST00000360280 LINC00467Q9BRT7 94 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 FAM215AQ9Y5M1 114 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 PRYO14603 147 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 SIRPDQ9H106 197 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 TECTAO75443 2155 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 PTPN13Q12923 2485 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 SMIM9A6NGZ8 99 aa7.05□□□□□ -1.28
VPS13A-203ENST00000360280 C11orf45Q8TAV5 145 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 LST1O00453 97 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 IGHV4-38-2P0DP08 117 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 RITA1Q96K30 269 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 ZFAND3Q9H8U3 227 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 IGHV4-30-2A0A087WSY4 118 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 C11orf53Q8IXP5 236 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 A0A096LNI7 61 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 UBE2D1P51668 147 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 PROK2Q9HC23 129 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 CCDC179H3BU77 68 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 COL4A6Q14031 1691 aa7.04□□□□□ -1.28
VPS13A-203ENST00000360280 CEMP1Q6PRD7 247 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-203ENST00000360280 Q6Q795 121 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 SLPIP03973 132 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 J3QKU1 62 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 MRPS12O15235 138 aaKnown RBP7.03□□□□□ -1.28
VPS13A-203ENST00000360280 MAP6D1Q9H9H5 199 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 UBE2D4Q9Y2X8 147 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 FAM19A5Q7Z5A7 132 aaPredicted RBP7.03□□□□□ -1.28
VPS13A-203ENST00000360280 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 VPREB1P12018 145 aa7.03□□□□□ -1.28
VPS13A-203ENST00000360280 NRACQ8N912 160 aa7.02□□□□□ -1.28
VPS13A-203ENST00000360280 MUC7Q8TAX7 377 aa7.02□□□□□ -1.28
VPS13A-203ENST00000360280 PTPRQQ9UMZ3 2332 aa7.02□□□□□ -1.29
VPS13A-203ENST00000360280 Q6ZVQ6 151 aa7.02□□□□□ -1.29
VPS13A-203ENST00000360280 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
VPS13A-203ENST00000360280 ANKHD1Q8IWZ3 2542 aaKnown RBP7.02□□□□□ -1.29
VPS13A-203ENST00000360280 IGKV2-28A0A075B6P5 120 aa7.02□□□□□ -1.29
VPS13A-203ENST00000360280 IGKV2D-28P01615 120 aa7.02□□□□□ -1.29
VPS13A-203ENST00000360280 UBE2D3P61077 147 aa7.02□□□□□ -1.29
VPS13A-203ENST00000360280 PCSK5Q92824 1860 aa7.02□□□□□ -1.29
VPS13A-203ENST00000360280 Q6JHZ5 121 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms