RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 SPANXA1Q9NS26 97 aa15.78■□□□□ 0.12
LIMS2-202ENST00000355119 CHCHD7Q9BUK0 85 aa15.78■□□□□ 0.12
LIMS2-202ENST00000355119 TEX15Q9BXT5 2789 aa15.78■□□□□ 0.12
LIMS2-202ENST00000355119 C1orf158Q8N1D5 194 aa15.77■□□□□ 0.12
LIMS2-202ENST00000355119 ABCA12Q86UK0 2595 aa15.77■□□□□ 0.11
LIMS2-202ENST00000355119 SAP30O75446 220 aa15.77■□□□□ 0.11
LIMS2-202ENST00000355119 LINC01006Q8NI28 216 aa15.77■□□□□ 0.11
LIMS2-202ENST00000355119 VPS25Q9BRG1 176 aa15.77■□□□□ 0.11
LIMS2-202ENST00000355119 AZU1P20160 251 aa15.76■□□□□ 0.11
LIMS2-202ENST00000355119 IL17DQ8TAD2 202 aa15.76■□□□□ 0.11
LIMS2-202ENST00000355119 FAM104AQ969W3 186 aa15.76■□□□□ 0.11
LIMS2-202ENST00000355119 IGHV3-30P01768 117 aa15.75■□□□□ 0.11
LIMS2-202ENST00000355119 IGHV3-30-5P0DP03 117 aa15.75■□□□□ 0.11
LIMS2-202ENST00000355119 MRPS36P82909 103 aaKnown RBP15.75■□□□□ 0.11
LIMS2-202ENST00000355119 PGPEP1Q9NXJ5 209 aa15.75■□□□□ 0.11
LIMS2-202ENST00000355119 Q9UF83 564 aa15.75■□□□□ 0.11
LIMS2-202ENST00000355119 CENPEQ02224 2701 aa15.75■□□□□ 0.11
LIMS2-202ENST00000355119 NACAE9PAV3 2078 aa15.75■□□□□ 0.11
LIMS2-202ENST00000355119 COTL1Q14019 142 aa15.74■□□□□ 0.11
LIMS2-202ENST00000355119 UBE2D4Q9Y2X8 147 aa15.74■□□□□ 0.11
LIMS2-202ENST00000355119 F8W1H4 67 aa15.73■□□□□ 0.11
LIMS2-202ENST00000355119 IGHV3OR16-12A0A075B7B8 117 aa15.73■□□□□ 0.11
LIMS2-202ENST00000355119 CEMP1Q6PRD7 247 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-202ENST00000355119 G3V4G9 280 aa15.72■□□□□ 0.11
LIMS2-202ENST00000355119 APCP25054 2843 aa15.71■□□□□ 0.11
LIMS2-202ENST00000355119 PLA2G2AP14555 144 aa15.71■□□□□ 0.11
LIMS2-202ENST00000355119 IGHV3-64A0A075B6Q5 118 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.7■□□□□ 0.1
LIMS2-202ENST00000355119 TRGV1A0A0A0MS02 117 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 TINCRA0A1B0GVN0 87 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 IGKV2-29A2NJV5 120 aaPredicted RBP15.7■□□□□ 0.1
LIMS2-202ENST00000355119 J3QKU1 62 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 APOMO95445 188 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 NDUFA11Q86Y39 141 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 TIMM21Q9BVV7 248 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 IGHV3-38A0A0C4DH36 116 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 TSPAN13O95857 204 aa15.7■□□□□ 0.1
LIMS2-202ENST00000355119 TMEM263Q8WUH6 116 aaKnown RBP15.7■□□□□ 0.1
LIMS2-202ENST00000355119 H3BMG7 143 aa15.69■□□□□ 0.1
LIMS2-202ENST00000355119 ZNF418Q8TF45 676 aaPredicted RBP15.68■□□□□ 0.1
LIMS2-202ENST00000355119 IGHV3-30-3P0DP02 117 aa15.68■□□□□ 0.1
LIMS2-202ENST00000355119 LYRM7Q5U5X0 104 aa15.68■□□□□ 0.1
LIMS2-202ENST00000355119 FAM110AQ9BQ89 295 aa15.68■□□□□ 0.1
LIMS2-202ENST00000355119 TMEM238C9JI98 176 aa15.67■□□□□ 0.1
LIMS2-202ENST00000355119 PCP4P48539 62 aa15.67■□□□□ 0.1
LIMS2-202ENST00000355119 RPL24P83731 157 aaKnown RBP15.67■□□□□ 0.1
LIMS2-202ENST00000355119 GAGE13Q4V321 117 aa15.67■□□□□ 0.1
LIMS2-202ENST00000355119 RNASE13Q5GAN3 156 aaKnown RBP15.67■□□□□ 0.1
LIMS2-202ENST00000355119 Q6ZUT4 128 aa15.67■□□□□ 0.1
LIMS2-202ENST00000355119 ITPR3Q14573 2671 aa15.67■□□□□ 0.1
LIMS2-202ENST00000355119 CFC1BP0CG36 223 aa15.67■□□□□ 0.1
LIMS2-202ENST00000355119 CFC1P0CG37 223 aa15.67■□□□□ 0.1
LIMS2-202ENST00000355119 IGHV1-58A0A0C4DH39 117 aa15.66■□□□□ 0.1
LIMS2-202ENST00000355119 TRBV10-1A0A0K0K1A3 114 aa15.66■□□□□ 0.1
LIMS2-202ENST00000355119 TRAV4A0A0B4J268 109 aa15.65■□□□□ 0.1
LIMS2-202ENST00000355119 IGLV1-51P01701 117 aa15.65■□□□□ 0.1
LIMS2-202ENST00000355119 WFDC2Q14508 124 aa15.65■□□□□ 0.1
LIMS2-202ENST00000355119 NDUFA7O95182 113 aa15.65■□□□□ 0.1
LIMS2-202ENST00000355119 HILS1P60008 231 aa15.65■□□□□ 0.1
LIMS2-202ENST00000355119 C10orf126Q8N4M7 172 aa15.65■□□□□ 0.1
LIMS2-202ENST00000355119 A0A0J9YXY3 114 aa15.64■□□□□ 0.09
LIMS2-202ENST00000355119 RPL36AP83881 106 aaKnown RBP15.64■□□□□ 0.09
LIMS2-202ENST00000355119 RPL36ALQ969Q0 106 aaKnown RBP15.64■□□□□ 0.09
LIMS2-202ENST00000355119 PRO0461Q9UI25 63 aa15.64■□□□□ 0.09
LIMS2-202ENST00000355119 K7EQD1 137 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 UBE2D3P61077 147 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 UBE2D2P62837 147 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 Q6ZTI0 123 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 PRO1854Q9UHT4 67 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 LOC107984156A0A0G2JMH3 177 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 TEX48A0A1B0GUV7 120 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 DAZ2Q13117 558 aaKnown RBP15.63■□□□□ 0.09
LIMS2-202ENST00000355119 DGAT2L7PQ6IED9 249 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 ARL17AQ8IVW1 177 aa15.63■□□□□ 0.09
LIMS2-202ENST00000355119 GEMIN7Q9H840 131 aaKnown RBP15.63■□□□□ 0.09
LIMS2-202ENST00000355119 VSIG2Q96IQ7 327 aa15.62■□□□□ 0.09
LIMS2-202ENST00000355119 TRAV8-3A0A0A6YYJ7 113 aa15.61■□□□□ 0.09
LIMS2-202ENST00000355119 A4D1N5 150 aa15.61■□□□□ 0.09
LIMS2-202ENST00000355119 ADARB2-AS1A8MUL3 147 aa15.61■□□□□ 0.09
LIMS2-202ENST00000355119 GIG44P09565 113 aaPredicted RBP15.61■□□□□ 0.09
LIMS2-202ENST00000355119 TIRAPP58753 221 aa15.61■□□□□ 0.09
LIMS2-202ENST00000355119 C16orf74Q96GX8 76 aa15.61■□□□□ 0.09
LIMS2-202ENST00000355119 DAZ4Q86SG3 579 aaKnown RBP15.61■□□□□ 0.09
LIMS2-202ENST00000355119 MUSTN1Q8IVN3 82 aa15.61■□□□□ 0.09
LIMS2-202ENST00000355119 C1QTNF4Q9BXJ3 329 aa15.61■□□□□ 0.09
LIMS2-202ENST00000355119 DAZ3Q9NR90 486 aaKnown RBP15.61■□□□□ 0.09
LIMS2-202ENST00000355119 C19orf73Q9NVV2 129 aa15.6■□□□□ 0.09
LIMS2-202ENST00000355119 MYO9AB2RTY4 2548 aa15.6■□□□□ 0.09
LIMS2-202ENST00000355119 A0A0B4J2C4 111 aa15.6■□□□□ 0.09
LIMS2-202ENST00000355119 NDUFA12Q9UI09 145 aa15.6■□□□□ 0.09
LIMS2-202ENST00000355119 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.59■□□□□ 0.09
LIMS2-202ENST00000355119 SPINK8P0C7L1 97 aa15.59■□□□□ 0.09
LIMS2-202ENST00000355119 PSMB2P49721 201 aa15.59■□□□□ 0.09
LIMS2-202ENST00000355119 NOP10Q9NPE3 64 aaKnown RBP15.59■□□□□ 0.09
LIMS2-202ENST00000355119 IGLV5-45A0A087WSX0 123 aa15.58■□□□□ 0.09
LIMS2-202ENST00000355119 RPL35AP18077 110 aaKnown RBP15.58■□□□□ 0.09
LIMS2-202ENST00000355119 SMAGPQ0VAQ4 97 aa15.58■□□□□ 0.08
LIMS2-202ENST00000355119 TRBV20-1A0A075B6N2 111 aa15.57■□□□□ 0.08
LIMS2-202ENST00000355119 WFDC10AQ9H1F0 79 aa15.57■□□□□ 0.08
LIMS2-202ENST00000355119 J3QR89 54 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms