RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 PRSS2P07478 247 aa11.04□□□□□ -0.64
TRAF3-202ENST00000351691 DCANP1Q8TF63 244 aa11.04□□□□□ -0.64
TRAF3-202ENST00000351691 C19orf84I3L1E1 186 aa11.04□□□□□ -0.64
TRAF3-202ENST00000351691 ADAMTSL4-AS1Q5T5F5 129 aa11.04□□□□□ -0.64
TRAF3-202ENST00000351691 ZNF462Q96JM2 2506 aa11.04□□□□□ -0.64
TRAF3-202ENST00000351691 USP9XQ93008 2570 aaPredicted RBP11.03□□□□□ -0.64
TRAF3-202ENST00000351691 UTP20O75691 2785 aaKnown RBP11.03□□□□□ -0.64
TRAF3-202ENST00000351691 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
TRAF3-202ENST00000351691 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
TRAF3-202ENST00000351691 MYO18BQ8IUG5 2567 aa11.03□□□□□ -0.64
TRAF3-202ENST00000351691 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
TRAF3-202ENST00000351691 PIMREGQ9BSJ6 248 aa11.03□□□□□ -0.64
TRAF3-202ENST00000351691 C5orf47Q569G3 176 aa11.02□□□□□ -0.65
TRAF3-202ENST00000351691 C5orf38Q86SI9 138 aa11.01□□□□□ -0.65
TRAF3-202ENST00000351691 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
TRAF3-202ENST00000351691 USMG5Q96IX5 58 aa11.01□□□□□ -0.65
TRAF3-202ENST00000351691 ZNF580Q9UK33 172 aa11.01□□□□□ -0.65
TRAF3-202ENST00000351691 RPS28P62857 69 aaKnown RBP11.01□□□□□ -0.65
TRAF3-202ENST00000351691 VSIG2Q96IQ7 327 aa11.01□□□□□ -0.65
TRAF3-202ENST00000351691 SPXQ9BT56 116 aa11.01□□□□□ -0.65
TRAF3-202ENST00000351691 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
TRAF3-202ENST00000351691 IGHV3-16A0A0C4DH30 117 aa11□□□□□ -0.65
TRAF3-202ENST00000351691 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
TRAF3-202ENST00000351691 J3KT08 172 aa11□□□□□ -0.65
TRAF3-202ENST00000351691 DEFB1P60022 68 aa11□□□□□ -0.65
TRAF3-202ENST00000351691 PEMTQ9UBM1 199 aa11□□□□□ -0.65
TRAF3-202ENST00000351691 F6UB75 175 aa11□□□□□ -0.65
TRAF3-202ENST00000351691 TMEM219Q86XT9 240 aa11□□□□□ -0.65
TRAF3-202ENST00000351691 TRAV8-3A0A0A6YYJ7 113 aa10.99□□□□□ -0.65
TRAF3-202ENST00000351691 RPL11P62913 178 aaKnown RBP10.99□□□□□ -0.65
TRAF3-202ENST00000351691 HERVK_113P63121 156 aa10.99□□□□□ -0.65
TRAF3-202ENST00000351691 UNQ9165/PRO28630Q6UXU0 137 aa10.99□□□□□ -0.65
TRAF3-202ENST00000351691 ADARB2-AS1A8MUL3 147 aa10.99□□□□□ -0.65
TRAF3-202ENST00000351691 ID1P41134 155 aa10.99□□□□□ -0.65
TRAF3-202ENST00000351691 C3orf56Q8N813 242 aa10.99□□□□□ -0.65
TRAF3-202ENST00000351691 C10orf105Q8TEF2 133 aa10.99□□□□□ -0.65
TRAF3-202ENST00000351691 COX7A2LO14548 114 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 IGHG2P01859 326 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 CD28P10747 220 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 COX7CP15954 63 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 FAM74A4Q5TZK3 123 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 CEMP1Q6PRD7 247 aaPredicted RBP10.98□□□□□ -0.65
TRAF3-202ENST00000351691 DAND5Q8N907 189 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 FAM104AQ969W3 186 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 CRYBG3Q68DQ2 2970 aa10.98□□□□□ -0.65
TRAF3-202ENST00000351691 A6NDX4 124 aa10.97□□□□□ -0.65
TRAF3-202ENST00000351691 CRYGAP11844 174 aa10.97□□□□□ -0.65
TRAF3-202ENST00000351691 ZNF843Q8N446 348 aa10.97□□□□□ -0.65
TRAF3-202ENST00000351691 SMCR5Q8TEV8 140 aa10.97□□□□□ -0.65
TRAF3-202ENST00000351691 DOPEY1Q5JWR5 2465 aa10.97□□□□□ -0.65
TRAF3-202ENST00000351691 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
TRAF3-202ENST00000351691 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
TRAF3-202ENST00000351691 IGHV4-61A0A0C4DH41 118 aa10.96□□□□□ -0.65
TRAF3-202ENST00000351691 TRACP01848 142 aa10.96□□□□□ -0.65
TRAF3-202ENST00000351691 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.66
TRAF3-202ENST00000351691 Q6ZSV7 163 aa10.96□□□□□ -0.66
TRAF3-202ENST00000351691 COPS9Q8WXC6 57 aa10.96□□□□□ -0.66
TRAF3-202ENST00000351691 LINC00527Q9UJ94 153 aa10.96□□□□□ -0.66
TRAF3-202ENST00000351691 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
TRAF3-202ENST00000351691 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
TRAF3-202ENST00000351691 CITED2Q99967 270 aaPredicted RBP10.95□□□□□ -0.66
TRAF3-202ENST00000351691 NDUFA1O15239 70 aa10.94□□□□□ -0.66
TRAF3-202ENST00000351691 C2orf48Q96LS8 159 aa10.94□□□□□ -0.66
TRAF3-202ENST00000351691 CCL19Q99731 98 aa10.94□□□□□ -0.66
TRAF3-202ENST00000351691 TACC2O95359 2948 aa10.94□□□□□ -0.66
TRAF3-202ENST00000351691 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
TRAF3-202ENST00000351691 SMIM9A6NGZ8 99 aa10.94□□□□□ -0.66
TRAF3-202ENST00000351691 BRD3OSQ6XYD6 125 aa10.94□□□□□ -0.66
TRAF3-202ENST00000351691 ASH1LQ9NR48 2969 aaKnown RBP10.94□□□□□ -0.66
TRAF3-202ENST00000351691 ATOX1O00244 68 aa10.93□□□□□ -0.66
TRAF3-202ENST00000351691 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
TRAF3-202ENST00000351691 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
TRAF3-202ENST00000351691 FAM208BQ5VWN6 2430 aa10.93□□□□□ -0.66
TRAF3-202ENST00000351691 INAFM2P0DMQ5 153 aa10.93□□□□□ -0.66
TRAF3-202ENST00000351691 BEAN1Q3B7T3 259 aa10.93□□□□□ -0.66
TRAF3-202ENST00000351691 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
TRAF3-202ENST00000351691 DUX5Q96PT3 197 aa10.92□□□□□ -0.66
TRAF3-202ENST00000351691 UBR5O95071 2799 aaPredicted RBP10.92□□□□□ -0.66
TRAF3-202ENST00000351691 H3BUX3 64 aa10.92□□□□□ -0.66
TRAF3-202ENST00000351691 WIPF1O43516 503 aa10.92□□□□□ -0.66
TRAF3-202ENST00000351691 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
TRAF3-202ENST00000351691 IGHV4-38-2P0DP08 117 aa10.92□□□□□ -0.66
TRAF3-202ENST00000351691 GAGE2AQ6NT46 116 aa10.92□□□□□ -0.66
TRAF3-202ENST00000351691 KMT2BQ9UMN6 2715 aaPredicted RBP10.92□□□□□ -0.66
TRAF3-202ENST00000351691 CHD6Q8TD26 2715 aa10.91□□□□□ -0.66
TRAF3-202ENST00000351691 IGHV1OR15-1A0A075B7D0 117 aa10.91□□□□□ -0.66
TRAF3-202ENST00000351691 K7EMT4 169 aa10.91□□□□□ -0.66
TRAF3-202ENST00000351691 TIRAPP58753 221 aa10.91□□□□□ -0.66
TRAF3-202ENST00000351691 DAZ2Q13117 558 aaKnown RBP10.91□□□□□ -0.66
TRAF3-202ENST00000351691 DAZ4Q86SG3 579 aaKnown RBP10.91□□□□□ -0.66
TRAF3-202ENST00000351691 DAZ1Q9NQZ3 744 aaKnown RBP10.91□□□□□ -0.66
TRAF3-202ENST00000351691 DAZ3Q9NR90 486 aaKnown RBP10.91□□□□□ -0.66
TRAF3-202ENST00000351691 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
TRAF3-202ENST00000351691 LRRK2Q5S007 2527 aa10.91□□□□□ -0.66
TRAF3-202ENST00000351691 IGLV5-45A0A087WSX0 123 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 MSMBP08118 114 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 PF4V1P10720 104 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 NPC2P61916 151 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 LY6EQ16553 131 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 FAM19A5Q7Z5A7 132 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms