RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 LINC01620Q4KN68 170 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 DKK2Q9UBU2 259 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 COL27A1Q8IZC6 1860 aaPredicted RBP9.14□□□□□ -0.95
SMAD9-201ENST00000350148 SPART-AS1P0CW21 52 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 LINC01006Q8NI28 216 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 Q8N976 141 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 LINC00694P0DN24 101 aa9.13□□□□□ -0.95
SMAD9-201ENST00000350148 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
SMAD9-201ENST00000350148 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
SMAD9-201ENST00000350148 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
SMAD9-201ENST00000350148 LINC00643Q86TS7 51 aa9.13□□□□□ -0.95
SMAD9-201ENST00000350148 DSCR8Q96T75 97 aa9.13□□□□□ -0.95
SMAD9-201ENST00000350148 ZFP2Q6ZN57 461 aa9.12□□□□□ -0.95
SMAD9-201ENST00000350148 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
SMAD9-201ENST00000350148 TRAV4A0A0B4J268 109 aa9.12□□□□□ -0.95
SMAD9-201ENST00000350148 CFHR3Q02985 330 aa9.12□□□□□ -0.95
SMAD9-201ENST00000350148 INAFM1C9JVW0 142 aa9.12□□□□□ -0.95
SMAD9-201ENST00000350148 VCANP13611 3396 aa9.11□□□□□ -0.95
SMAD9-201ENST00000350148 CHD9Q3L8U1 2897 aa9.11□□□□□ -0.95
SMAD9-201ENST00000350148 TOMM6Q96B49 74 aa9.11□□□□□ -0.95
SMAD9-201ENST00000350148 F8W735 103 aaPredicted RBP9.11□□□□□ -0.95
SMAD9-201ENST00000350148 SPG11Q96JI7 2443 aa9.11□□□□□ -0.95
SMAD9-201ENST00000350148 C6orf226Q5I0X4 101 aa9.11□□□□□ -0.95
SMAD9-201ENST00000350148 PIK3CD-AS1Q5SR53 167 aa9.11□□□□□ -0.95
SMAD9-201ENST00000350148 HIGD1BQ9P298 99 aa9.11□□□□□ -0.95
SMAD9-201ENST00000350148 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
SMAD9-201ENST00000350148 U3KQK5 164 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 CRIP1P50238 77 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 UNC80Q8N2C7 3258 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 KLLNB2CW77 178 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 VPREB1P12018 145 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 RPL39LQ96EH5 51 aaKnown RBP9.1□□□□□ -0.95
SMAD9-201ENST00000350148 WDR87Q6ZQQ6 2873 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 IGHV4-4A0A075B6R2 117 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 GATA1P15976 413 aaPredicted RBP9.1□□□□□ -0.95
SMAD9-201ENST00000350148 UBE2DNLQ8IWF7 75 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 RMI2Q96E14 147 aa9.1□□□□□ -0.95
SMAD9-201ENST00000350148 PIEZO2Q9H5I5 2752 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 KLK9Q2XQG4 91 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 TRBV7-3A0A075B6L6 115 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 TRBV10-2A0A0K0K1G8 114 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 HIST2H2BCQ6DN03 193 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 HIVEP2P31629 2446 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 Q6ZS46 218 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 Q8N2B8 174 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
SMAD9-201ENST00000350148 CREBBPQ92793 2442 aa9.08□□□□□ -0.96
SMAD9-201ENST00000350148 J3QQQ9 107 aa9.08□□□□□ -0.96
SMAD9-201ENST00000350148 C10orf99Q6UWK7 81 aa9.08□□□□□ -0.96
SMAD9-201ENST00000350148 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
SMAD9-201ENST00000350148 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
SMAD9-201ENST00000350148 ICOSQ9Y6W8 199 aa9.08□□□□□ -0.96
SMAD9-201ENST00000350148 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
SMAD9-201ENST00000350148 CHD7Q9P2D1 2997 aa9.07□□□□□ -0.96
SMAD9-201ENST00000350148 F8WEM9 126 aa9.07□□□□□ -0.96
SMAD9-201ENST00000350148 TRAV13-2A0A0B4J235 113 aa9.07□□□□□ -0.96
SMAD9-201ENST00000350148 LYRM9A8MSI8 78 aa9.07□□□□□ -0.96
SMAD9-201ENST00000350148 H3BT86 120 aa9.07□□□□□ -0.96
SMAD9-201ENST00000350148 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
SMAD9-201ENST00000350148 DEFB1P60022 68 aa9.06□□□□□ -0.96
SMAD9-201ENST00000350148 TIMM17BO60830 172 aa9.06□□□□□ -0.96
SMAD9-201ENST00000350148 PFN2P35080 140 aa9.06□□□□□ -0.96
SMAD9-201ENST00000350148 SLC25A29Q8N8R3 303 aa9.06□□□□□ -0.96
SMAD9-201ENST00000350148 NAV2Q8IVL1 2488 aa9.06□□□□□ -0.96
SMAD9-201ENST00000350148 FAM19A5Q7Z5A7 132 aaPredicted RBP9.06□□□□□ -0.96
SMAD9-201ENST00000350148 ANKRD11Q6UB99 2663 aaPredicted RBP9.05□□□□□ -0.96
SMAD9-201ENST00000350148 ORMDL1Q9P0S3 153 aa9.05□□□□□ -0.96
SMAD9-201ENST00000350148 SZT2Q5T011 3432 aa9.05□□□□□ -0.96
SMAD9-201ENST00000350148 TRBV6-5A0A0K0K1A5 114 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 H7C423 109 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 C20orf203Q8NBC4 194 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 GYPEP15421 78 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 HHLA3Q9XRX5 114 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 ATRXP46100 2492 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 NAV3Q8IVL0 2385 aa9.04□□□□□ -0.96
SMAD9-201ENST00000350148 TRANK1O15050 2925 aa9.03□□□□□ -0.96
SMAD9-201ENST00000350148 KIR2DL5BQ8NHK3 375 aa9.03□□□□□ -0.96
SMAD9-201ENST00000350148 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
SMAD9-201ENST00000350148 RANBP2P49792 3224 aaKnown RBP9.03□□□□□ -0.96
SMAD9-201ENST00000350148 C9orf85Q96MD7 179 aa9.03□□□□□ -0.96
SMAD9-201ENST00000350148 SMIM26A0A096LP01 95 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 VSIG2Q96IQ7 327 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 SPRY2O43597 315 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 MP68P56378 58 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.97
SMAD9-201ENST00000350148 C11orf86A6NJI1 115 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 RNF185Q96GF1 192 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 HIVEP3Q5T1R4 2406 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 DPH3Q96FX2 82 aa9.02□□□□□ -0.97
SMAD9-201ENST00000350148 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.01□□□□□ -0.97
SMAD9-201ENST00000350148 IGKV2-29A2NJV5 120 aaPredicted RBP9.01□□□□□ -0.97
SMAD9-201ENST00000350148 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
SMAD9-201ENST00000350148 MIFP14174 115 aa9.01□□□□□ -0.97
SMAD9-201ENST00000350148 COX7CP15954 63 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms