RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 C2orf82Q6UX34 121 aa12.24□□□□□ -0.45
SMARCA4-201ENST00000344626 ZNF664Q8N3J9 261 aa12.24□□□□□ -0.45
SMARCA4-201ENST00000344626 CXCL5P42830 114 aa12.24□□□□□ -0.45
SMARCA4-201ENST00000344626 KIR3DS1Q14943 382 aa12.24□□□□□ -0.45
SMARCA4-201ENST00000344626 M0R2N4 97 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 BOD1L2Q8IYS8 172 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 PRSS47A8MTI9 375 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 DKK2Q9UBU2 259 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 TRAV8-3A0A0A6YYJ7 113 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 TP53TG3Q9ULZ0 132 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 KRTAP24-1Q3LI83 254 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
SMARCA4-201ENST00000344626 MRPL52Q86TS9 123 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-201ENST00000344626 COX8AP10176 69 aa12.22□□□□□ -0.45
SMARCA4-201ENST00000344626 TAL2Q16559 108 aa12.22□□□□□ -0.45
SMARCA4-201ENST00000344626 COX7B2Q8TF08 81 aa12.22□□□□□ -0.45
SMARCA4-201ENST00000344626 GTSF1LQ9H1H1 148 aa12.22□□□□□ -0.45
SMARCA4-201ENST00000344626 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.45
SMARCA4-201ENST00000344626 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
SMARCA4-201ENST00000344626 IGHV4-28A0A0C4DH34 117 aa12.2□□□□□ -0.46
SMARCA4-201ENST00000344626 BRI3O95415 125 aa12.2□□□□□ -0.46
SMARCA4-201ENST00000344626 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
SMARCA4-201ENST00000344626 PROK1P58294 105 aa12.19□□□□□ -0.46
SMARCA4-201ENST00000344626 GAGE2EQ4V326 116 aa12.19□□□□□ -0.46
SMARCA4-201ENST00000344626 GAGE2DQ9UEU5 116 aa12.19□□□□□ -0.46
SMARCA4-201ENST00000344626 C20orf203Q8NBC4 194 aa12.18□□□□□ -0.46
SMARCA4-201ENST00000344626 TRAV12-1A0A0B4J245 112 aa12.18□□□□□ -0.46
SMARCA4-201ENST00000344626 H7C423 109 aa12.18□□□□□ -0.46
SMARCA4-201ENST00000344626 ZFAND2AQ8N6M9 145 aa12.18□□□□□ -0.46
SMARCA4-201ENST00000344626 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-201ENST00000344626 SPAG11BQ08648 103 aa12.18□□□□□ -0.46
SMARCA4-201ENST00000344626 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 RETNQ9HD89 108 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 TRANK1O15050 2925 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 DSPP15924 2871 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 TRBV6-4A0A1B0GX49 114 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 SIVA1O15304 175 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 HCFC1P51610 2035 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 A0A0J9YWU9 116 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 ETDCA0A1B0GVM5 59 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 IGLC6P0CF74 106 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 MLST8Q9BVC4 326 aa12.17□□□□□ -0.46
SMARCA4-201ENST00000344626 A0A1B0GV72 72 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 CCL25O15444 150 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 IFITM1P13164 125 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 TRIOO75962 3097 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 CRYGDP07320 174 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 GAGE2BQ13066 116 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
SMARCA4-201ENST00000344626 LINC01545Q5VT33 79 aa12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 NAA38Q9BRA0 125 aaKnown RBP12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 PRO1854Q9UHT4 67 aa12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 CPAMD8Q8IZJ3 1885 aa12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 TRBV20-1A0A075B6N2 111 aa12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 G3V4G9 280 aa12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 NANOS2P60321 138 aaKnown RBP12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 RS1O15537 224 aa12.15□□□□□ -0.46
SMARCA4-201ENST00000344626 DCANP1Q8TF63 244 aa12.15□□□□□ -0.47
SMARCA4-201ENST00000344626 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
SMARCA4-201ENST00000344626 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
SMARCA4-201ENST00000344626 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
SMARCA4-201ENST00000344626 CFAP126Q5VTH2 177 aa12.14□□□□□ -0.47
SMARCA4-201ENST00000344626 BPTFQ12830 3046 aa12.13□□□□□ -0.47
SMARCA4-201ENST00000344626 MGAQ8IWI9 3026 aa12.13□□□□□ -0.47
SMARCA4-201ENST00000344626 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
SMARCA4-201ENST00000344626 BAALCQ8WXS3 180 aa12.13□□□□□ -0.47
SMARCA4-201ENST00000344626 Q6ZVH6 145 aa12.13□□□□□ -0.47
SMARCA4-201ENST00000344626 CEND1Q8N111 149 aa12.13□□□□□ -0.47
SMARCA4-201ENST00000344626 REG3AQ06141 175 aa12.13□□□□□ -0.47
SMARCA4-201ENST00000344626 BVES-AS1Q5T3Y7 98 aa12.12□□□□□ -0.47
SMARCA4-201ENST00000344626 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
SMARCA4-201ENST00000344626 C9JAW5 83 aa12.12□□□□□ -0.47
SMARCA4-201ENST00000344626 EXPH5Q8NEV8 1989 aa12.12□□□□□ -0.47
SMARCA4-201ENST00000344626 SOCS3O14543 225 aa12.12□□□□□ -0.47
SMARCA4-201ENST00000344626 INAFM2P0DMQ5 153 aa12.11□□□□□ -0.47
SMARCA4-201ENST00000344626 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-201ENST00000344626 U3KQK5 164 aa12.11□□□□□ -0.47
SMARCA4-201ENST00000344626 P0DMU3 169 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 FAM231AP0DMU4 169 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 FAM231CP0DMU5 169 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 NFE4Q86UQ8 179 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 LINC00269Q8N2A0 174 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 MTURNQ8N3F0 131 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 KLLNB2CW77 178 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 EDN2P20800 178 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
SMARCA4-201ENST00000344626 LAMA2P24043 3122 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 KPRPQ5T749 579 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 NEXN-AS1Q8NBZ9 246 aa12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 IGKV2-24A0A0C4DH68 120 aa12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 SND1-IT1Q9HBX3 110 aa12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 TNRC6BQ9UPQ9 1833 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 TET2Q6N021 2002 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-201ENST00000344626 RPL32P62910 135 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms