RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 COA6Q5JTJ3 125 aaKnown RBP11.27□□□□□ -0.6
UBE3B-202ENST00000342494 KIR2DL5BQ8NHK3 375 aa11.27□□□□□ -0.61
UBE3B-202ENST00000342494 TMEM131Q92545 1883 aa11.27□□□□□ -0.61
UBE3B-202ENST00000342494 A0A096LNI7 61 aa11.27□□□□□ -0.61
UBE3B-202ENST00000342494 FAM19A1Q7Z5A9 133 aa11.27□□□□□ -0.61
UBE3B-202ENST00000342494 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
UBE3B-202ENST00000342494 EBI3Q14213 229 aa11.26□□□□□ -0.61
UBE3B-202ENST00000342494 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
UBE3B-202ENST00000342494 NCOR2Q9Y618 2525 aa11.26□□□□□ -0.61
UBE3B-202ENST00000342494 PSMB8P28062 276 aa11.26□□□□□ -0.61
UBE3B-202ENST00000342494 FXYD2P54710 66 aa11.26□□□□□ -0.61
UBE3B-202ENST00000342494 ODF1Q14990 250 aa11.26□□□□□ -0.61
UBE3B-202ENST00000342494 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 CLEC2BQ92478 149 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 PLA2G2AP14555 144 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 PRR14LQ5THK1 2151 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 P0C879 139 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 PSMG3-AS1Q96PY0 264 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 C20orf173Q96LM9 149 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
UBE3B-202ENST00000342494 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
UBE3B-202ENST00000342494 C7orf33Q8WU49 177 aa11.24□□□□□ -0.61
UBE3B-202ENST00000342494 ZNF702PQ9H963 129 aa11.24□□□□□ -0.61
UBE3B-202ENST00000342494 ABCA2Q9BZC7 2435 aa11.24□□□□□ -0.61
UBE3B-202ENST00000342494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-202ENST00000342494 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
UBE3B-202ENST00000342494 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 H7C423 109 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 DSCAMO60469 2012 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 KIR2DL5BA0A0G2JN68 375 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 KIR2DL5BA0A0G2JPC4 375 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 KIR2DL5AQ8N109 375 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 NAV3Q8IVL0 2385 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 PLXNB3Q9ULL4 1909 aa11.23□□□□□ -0.61
UBE3B-202ENST00000342494 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-202ENST00000342494 DOPEY1Q5JWR5 2465 aa11.22□□□□□ -0.61
UBE3B-202ENST00000342494 BRWD1-AS2P59051 145 aa11.22□□□□□ -0.61
UBE3B-202ENST00000342494 M0R2N4 97 aa11.22□□□□□ -0.61
UBE3B-202ENST00000342494 PDE6GP18545 87 aa11.22□□□□□ -0.61
UBE3B-202ENST00000342494 IGKV2D-26A0A0A0MRZ7 120 aa11.21□□□□□ -0.61
UBE3B-202ENST00000342494 CRYGBP07316 175 aa11.21□□□□□ -0.61
UBE3B-202ENST00000342494 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-202ENST00000342494 NEXN-AS1Q8NBZ9 246 aa11.21□□□□□ -0.61
UBE3B-202ENST00000342494 SPANXCQ9NY87 97 aa11.21□□□□□ -0.61
UBE3B-202ENST00000342494 MIAQ16674 131 aa11.21□□□□□ -0.62
UBE3B-202ENST00000342494 TRBV6-8A0A0A6YYG3 113 aa11.21□□□□□ -0.62
UBE3B-202ENST00000342494 LY6G6CO95867 125 aa11.21□□□□□ -0.62
UBE3B-202ENST00000342494 FRMD6-AS1P0C7T7 363 aa11.21□□□□□ -0.62
UBE3B-202ENST00000342494 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.62
UBE3B-202ENST00000342494 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
UBE3B-202ENST00000342494 CFAP126Q5VTH2 177 aa11.2□□□□□ -0.62
UBE3B-202ENST00000342494 TEN1Q86WV5 123 aa11.2□□□□□ -0.62
UBE3B-202ENST00000342494 BBC3Q96PG8 261 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-202ENST00000342494 TRBV10-2A0A0K0K1G8 114 aa11.2□□□□□ -0.62
UBE3B-202ENST00000342494 IGKV4-1P06312 121 aa11.2□□□□□ -0.62
UBE3B-202ENST00000342494 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
UBE3B-202ENST00000342494 SYCNQ0VAF6 134 aa11.19□□□□□ -0.62
UBE3B-202ENST00000342494 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
UBE3B-202ENST00000342494 LINC00322Q6ZN03 302 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-202ENST00000342494 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
UBE3B-202ENST00000342494 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
UBE3B-202ENST00000342494 NCOA6Q14686 2063 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-202ENST00000342494 COL4A3Q01955 1670 aa11.18□□□□□ -0.62
UBE3B-202ENST00000342494 GDF5OSQ5U4N7 250 aa11.18□□□□□ -0.62
UBE3B-202ENST00000342494 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
UBE3B-202ENST00000342494 TNRC6AQ8NDV7 1962 aaKnown RBP11.18□□□□□ -0.62
UBE3B-202ENST00000342494 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
UBE3B-202ENST00000342494 H3BT86 120 aa11.18□□□□□ -0.62
UBE3B-202ENST00000342494 XAGE1AQ9HD64 81 aa11.18□□□□□ -0.62
UBE3B-202ENST00000342494 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
UBE3B-202ENST00000342494 Q8N976 141 aa11.17□□□□□ -0.62
UBE3B-202ENST00000342494 ATOX1O00244 68 aa11.17□□□□□ -0.62
UBE3B-202ENST00000342494 SEC61GP60059 68 aa11.17□□□□□ -0.62
UBE3B-202ENST00000342494 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-202ENST00000342494 WFDC10AQ9H1F0 79 aa11.16□□□□□ -0.62
UBE3B-202ENST00000342494 DENND4AQ7Z401 1863 aa11.16□□□□□ -0.62
UBE3B-202ENST00000342494 BPY2O14599 106 aa11.16□□□□□ -0.62
UBE3B-202ENST00000342494 Q6ZPA2 131 aa11.16□□□□□ -0.62
UBE3B-202ENST00000342494 A0A1B0GXF2 115 aa11.15□□□□□ -0.62
UBE3B-202ENST00000342494 C18orf65Q6ZTR6 163 aa11.15□□□□□ -0.62
UBE3B-202ENST00000342494 UBE2D1P51668 147 aa11.15□□□□□ -0.63
UBE3B-202ENST00000342494 OXLD1Q5BKU9 147 aa11.14□□□□□ -0.63
UBE3B-202ENST00000342494 FAM236AA0A1B0GUQ0 79 aa11.14□□□□□ -0.63
UBE3B-202ENST00000342494 FAM236BA0A1B0GV22 79 aa11.14□□□□□ -0.63
UBE3B-202ENST00000342494 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
UBE3B-202ENST00000342494 WFDC2Q14508 124 aa11.14□□□□□ -0.63
UBE3B-202ENST00000342494 IGF2RP11717 2491 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 IGLV4-3A0A075B6K6 122 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 M0QY20 66 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 IBA57-AS1B1ANH7 110 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 PROK1P58294 105 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 TNRC6BQ9UPQ9 1833 aaKnown RBP11.13□□□□□ -0.63
UBE3B-202ENST00000342494 CASC2Q6XLA1 102 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 SMR3AQ99954 134 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 MLST8Q9BVC4 326 aa11.13□□□□□ -0.63
UBE3B-202ENST00000342494 RBX1P62877 108 aa11.12□□□□□ -0.63
UBE3B-202ENST00000342494 SMIM20Q8N5G0 67 aa11.12□□□□□ -0.63
UBE3B-202ENST00000342494 DSCAML1Q8TD84 2053 aa11.12□□□□□ -0.63
UBE3B-202ENST00000342494 EIF4EBP1Q13541 118 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms