RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 APOC4P55056 127 aa11□□□□□ -0.65
RET-201ENST00000340058 MRGPRG-AS1Q2M3A8 158 aa11□□□□□ -0.65
RET-201ENST00000340058 LINC00482Q8N8I6 264 aa11□□□□□ -0.65
RET-201ENST00000340058 SH2D6Q7Z4S9 175 aa10.99□□□□□ -0.65
RET-201ENST00000340058 UBE2DNLQ8IWF7 75 aa10.99□□□□□ -0.65
RET-201ENST00000340058 Q9HAA7 133 aa10.99□□□□□ -0.65
RET-201ENST00000340058 UBE2WQ96B02 151 aa10.99□□□□□ -0.65
RET-201ENST00000340058 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
RET-201ENST00000340058 IGKV2D-26A0A0A0MRZ7 120 aa10.99□□□□□ -0.65
RET-201ENST00000340058 RNF185Q96GF1 192 aa10.99□□□□□ -0.65
RET-201ENST00000340058 SIGMAR1Q99720 223 aa10.99□□□□□ -0.65
RET-201ENST00000340058 CFAP47Q6ZTR5 3102 aa10.98□□□□□ -0.65
RET-201ENST00000340058 A4D1N5 150 aa10.98□□□□□ -0.65
RET-201ENST00000340058 K7EP34 96 aa10.97□□□□□ -0.65
RET-201ENST00000340058 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
RET-201ENST00000340058 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
RET-201ENST00000340058 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
RET-201ENST00000340058 TRBV7-3A0A075B6L6 115 aa10.96□□□□□ -0.65
RET-201ENST00000340058 SLC25A20O43772 301 aa10.96□□□□□ -0.65
RET-201ENST00000340058 C20orf203Q8NBC4 194 aa10.96□□□□□ -0.65
RET-201ENST00000340058 TRAV8-4A0A0B4J246 113 aa10.96□□□□□ -0.65
RET-201ENST00000340058 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
RET-201ENST00000340058 TOMM6Q96B49 74 aa10.96□□□□□ -0.65
RET-201ENST00000340058 TMEM89A2RUT3 159 aa10.96□□□□□ -0.66
RET-201ENST00000340058 K7EQD1 137 aa10.96□□□□□ -0.66
RET-201ENST00000340058 TAX1BP3O14907 124 aa10.96□□□□□ -0.66
RET-201ENST00000340058 MRPS12O15235 138 aaKnown RBP10.96□□□□□ -0.66
RET-201ENST00000340058 ATP6V0E2Q8NHE4 81 aa10.96□□□□□ -0.66
RET-201ENST00000340058 RNASE3P12724 160 aaKnown RBP10.95□□□□□ -0.66
RET-201ENST00000340058 HERVK_113P63121 156 aa10.95□□□□□ -0.66
RET-201ENST00000340058 Q6ZUT4 128 aa10.95□□□□□ -0.66
RET-201ENST00000340058 MUSTN1Q8IVN3 82 aa10.95□□□□□ -0.66
RET-201ENST00000340058 LINC01006Q8NI28 216 aa10.95□□□□□ -0.66
RET-201ENST00000340058 ADGRG4Q8IZF6 3080 aa10.95□□□□□ -0.66
RET-201ENST00000340058 ZNF561-AS1K7EIQ3 104 aa10.95□□□□□ -0.66
RET-201ENST00000340058 IGHV3-30P01768 117 aa10.94□□□□□ -0.66
RET-201ENST00000340058 IGHV3-33P01772 117 aa10.94□□□□□ -0.66
RET-201ENST00000340058 IGHV3-30-3P0DP02 117 aa10.94□□□□□ -0.66
RET-201ENST00000340058 IGHV3-30-5P0DP03 117 aa10.94□□□□□ -0.66
RET-201ENST00000340058 PSCAO43653 123 aa10.94□□□□□ -0.66
RET-201ENST00000340058 LAMTOR3Q9UHA4 124 aa10.94□□□□□ -0.66
RET-201ENST00000340058 HHLA3Q9XRX5 114 aa10.94□□□□□ -0.66
RET-201ENST00000340058 ATMQ13315 3056 aa10.94□□□□□ -0.66
RET-201ENST00000340058 C9orf66Q5T8R8 295 aa10.94□□□□□ -0.66
RET-201ENST00000340058 IGLV1-40P01703 118 aa10.93□□□□□ -0.66
RET-201ENST00000340058 IGLL5B9A064 214 aa10.93□□□□□ -0.66
RET-201ENST00000340058 SIVA1O15304 175 aa10.93□□□□□ -0.66
RET-201ENST00000340058 C16orf74Q96GX8 76 aa10.93□□□□□ -0.66
RET-201ENST00000340058 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
RET-201ENST00000340058 URB1-AS1Q96HZ7 61 aa10.92□□□□□ -0.66
RET-201ENST00000340058 ZZEF1O43149 2961 aa10.92□□□□□ -0.66
RET-201ENST00000340058 WFDC2Q14508 124 aa10.92□□□□□ -0.66
RET-201ENST00000340058 MAPKAPK5-AS1Q8N8E1 139 aa10.92□□□□□ -0.66
RET-201ENST00000340058 DCANP1Q8TF63 244 aa10.92□□□□□ -0.66
RET-201ENST00000340058 RS1O15537 224 aa10.91□□□□□ -0.66
RET-201ENST00000340058 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
RET-201ENST00000340058 CFC1P0CG37 223 aa10.91□□□□□ -0.66
RET-201ENST00000340058 VSIG2Q96IQ7 327 aa10.91□□□□□ -0.66
RET-201ENST00000340058 EDA2RQ9HAV5 297 aa10.91□□□□□ -0.66
RET-201ENST00000340058 DMXL2Q8TDJ6 3036 aa10.91□□□□□ -0.66
RET-201ENST00000340058 TEX48A0A1B0GUV7 120 aa10.91□□□□□ -0.66
RET-201ENST00000340058 LY6G6DO95868 133 aa10.91□□□□□ -0.66
RET-201ENST00000340058 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
RET-201ENST00000340058 A8MZ25 164 aa10.9□□□□□ -0.66
RET-201ENST00000340058 GAGE2AQ6NT46 116 aa10.9□□□□□ -0.66
RET-201ENST00000340058 LRRC75A-AS1Q8N1F1 130 aa10.9□□□□□ -0.66
RET-201ENST00000340058 RNASE8Q8TDE3 154 aaKnown RBP10.9□□□□□ -0.66
RET-201ENST00000340058 IGKV2D-24A0A075B6R9 120 aa10.9□□□□□ -0.66
RET-201ENST00000340058 E9PLD3 99 aa10.9□□□□□ -0.66
RET-201ENST00000340058 PSMG3-AS1Q96PY0 264 aa10.9□□□□□ -0.66
RET-201ENST00000340058 CHD6Q8TD26 2715 aa10.9□□□□□ -0.66
RET-201ENST00000340058 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
RET-201ENST00000340058 NTN5Q8WTR8 489 aaPredicted RBP10.9□□□□□ -0.66
RET-201ENST00000340058 LINC00467Q9BRT7 94 aa10.9□□□□□ -0.66
RET-201ENST00000340058 TIMM17AQ99595 171 aa10.9□□□□□ -0.67
RET-201ENST00000340058 PTPRBP23467 1997 aa10.89□□□□□ -0.67
RET-201ENST00000340058 LGALS9O00182 355 aa10.89□□□□□ -0.67
RET-201ENST00000340058 ATP5G1P05496 136 aa10.89□□□□□ -0.67
RET-201ENST00000340058 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
RET-201ENST00000340058 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
RET-201ENST00000340058 Q8N976 141 aa10.89□□□□□ -0.67
RET-201ENST00000340058 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
RET-201ENST00000340058 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
RET-201ENST00000340058 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
RET-201ENST00000340058 TAL2Q16559 108 aa10.89□□□□□ -0.67
RET-201ENST00000340058 TRAV25A0A0B4J276 109 aa10.88□□□□□ -0.67
RET-201ENST00000340058 M0QY20 66 aa10.88□□□□□ -0.67
RET-201ENST00000340058 NRACQ8N912 160 aa10.88□□□□□ -0.67
RET-201ENST00000340058 FAM110AQ9BQ89 295 aa10.88□□□□□ -0.67
RET-201ENST00000340058 TRAV4A0A0B4J268 109 aa10.88□□□□□ -0.67
RET-201ENST00000340058 KLK12Q9UKR0 248 aa10.88□□□□□ -0.67
RET-201ENST00000340058 RNF152Q8N8N0 203 aa10.88□□□□□ -0.67
RET-201ENST00000340058 CDKN2A-AS1Q9UH64 79 aa10.88□□□□□ -0.67
RET-201ENST00000340058 TRAV12-1A0A0B4J245 112 aa10.87□□□□□ -0.67
RET-201ENST00000340058 FAM222AQ5U5X8 452 aa10.87□□□□□ -0.67
RET-201ENST00000340058 SLC25A29Q8N8R3 303 aa10.87□□□□□ -0.67
RET-201ENST00000340058 PTH2Q96A98 100 aa10.87□□□□□ -0.67
RET-201ENST00000340058 IGHV4-4A0A075B6R2 117 aa10.87□□□□□ -0.67
RET-201ENST00000340058 CARD19Q96LW7 228 aa10.87□□□□□ -0.67
RET-201ENST00000340058 TRBV20-1A0A075B6N2 111 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms