RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 FAM30AQ9NZY2 134 aa9.93□□□□□ -0.82
USP47-202ENST00000339865 BRWD3Q6RI45 1802 aa9.92□□□□□ -0.82
USP47-202ENST00000339865 BDP1A6H8Y1 2624 aa9.92□□□□□ -0.82
USP47-202ENST00000339865 PLA2G2AP14555 144 aa9.92□□□□□ -0.82
USP47-202ENST00000339865 DEFB135Q30KP9 77 aa9.92□□□□□ -0.82
USP47-202ENST00000339865 FSHBP01225 129 aa9.92□□□□□ -0.82
USP47-202ENST00000339865 M0QXV9 152 aa9.92□□□□□ -0.82
USP47-202ENST00000339865 FLVCR1-AS1Q8TAF5 88 aa9.91□□□□□ -0.82
USP47-202ENST00000339865 POM121L12Q8N7R1 296 aa9.91□□□□□ -0.82
USP47-202ENST00000339865 ZFYVE26Q68DK2 2539 aa9.91□□□□□ -0.82
USP47-202ENST00000339865 LYRM9A8MSI8 78 aa9.91□□□□□ -0.82
USP47-202ENST00000339865 CCKP06307 115 aa9.9□□□□□ -0.82
USP47-202ENST00000339865 ATP5EP2Q5VTU8 51 aa9.9□□□□□ -0.82
USP47-202ENST00000339865 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
USP47-202ENST00000339865 KIAA1671Q9BY89 1806 aa9.9□□□□□ -0.82
USP47-202ENST00000339865 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
USP47-202ENST00000339865 SERTAD4-AS1Q5TG53 156 aa9.9□□□□□ -0.83
USP47-202ENST00000339865 THSD7AQ9UPZ6 1657 aa9.89□□□□□ -0.83
USP47-202ENST00000339865 UBE2D2P62837 147 aa9.89□□□□□ -0.83
USP47-202ENST00000339865 C11orf45Q8TAV5 145 aa9.89□□□□□ -0.83
USP47-202ENST00000339865 Q6ZR03 302 aa9.89□□□□□ -0.83
USP47-202ENST00000339865 VPREB1P12018 145 aa9.89□□□□□ -0.83
USP47-202ENST00000339865 WFDC13Q8IUB5 93 aa9.89□□□□□ -0.83
USP47-202ENST00000339865 CD59P13987 128 aa9.88□□□□□ -0.83
USP47-202ENST00000339865 C15orf65H3BRN8 121 aa9.88□□□□□ -0.83
USP47-202ENST00000339865 CEMP1Q6PRD7 247 aaPredicted RBP9.88□□□□□ -0.83
USP47-202ENST00000339865 TNS1Q9HBL0 1735 aaKnown RBP9.88□□□□□ -0.83
USP47-202ENST00000339865 IGLV3-19P01714 112 aa9.88□□□□□ -0.83
USP47-202ENST00000339865 CLUHP3Q96NS8 147 aa9.88□□□□□ -0.83
USP47-202ENST00000339865 FAM222AQ5U5X8 452 aa9.87□□□□□ -0.83
USP47-202ENST00000339865 K7ENP7 123 aa9.87□□□□□ -0.83
USP47-202ENST00000339865 FAM19A1Q7Z5A9 133 aa9.87□□□□□ -0.83
USP47-202ENST00000339865 IGKV1-17P01599 117 aa9.87□□□□□ -0.83
USP47-202ENST00000339865 VPREB3Q9UKI3 123 aa9.87□□□□□ -0.83
USP47-202ENST00000339865 J3QLI3 93 aa9.87□□□□□ -0.83
USP47-202ENST00000339865 Q6ZVQ6 151 aa9.86□□□□□ -0.83
USP47-202ENST00000339865 LINC00311Q8N616 119 aa9.86□□□□□ -0.83
USP47-202ENST00000339865 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
USP47-202ENST00000339865 NOTCH2Q04721 2471 aa9.86□□□□□ -0.83
USP47-202ENST00000339865 PSPHP1O15172 72 aa9.86□□□□□ -0.83
USP47-202ENST00000339865 C22orf34Q6ZV56 151 aa9.86□□□□□ -0.83
USP47-202ENST00000339865 LINC00269Q8N2A0 174 aa9.86□□□□□ -0.83
USP47-202ENST00000339865 COL5A3P25940 1745 aaPredicted RBP9.86□□□□□ -0.83
USP47-202ENST00000339865 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 B3GALT5-AS1P59052 145 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 SIP14410 1827 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 TLN2Q9Y4G6 2542 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 SMIM26A0A096LP01 95 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 LY6G6EA0A0G2JKS1 128 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 H3BUA1 57 aa9.85□□□□□ -0.83
USP47-202ENST00000339865 COX7CP15954 63 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 P0DMU3 169 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 FAM231AP0DMU4 169 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 FAM231CP0DMU5 169 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 MED14OSP0DP75 135 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 UFSP1Q6NVU6 142 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 SLX1AQ9BQ83 275 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 WFDC10AQ9H1F0 79 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 KAAG1Q9UBP8 84 aa9.84□□□□□ -0.83
USP47-202ENST00000339865 ADAMTS20P59510 1910 aa9.84□□□□□ -0.84
USP47-202ENST00000339865 INAFM1C9JVW0 142 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 TRIAP1O43715 76 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 AJUBAQ96IF1 538 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 PIEZO1Q92508 2521 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 Q8TCH9 128 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 COL18A1P39060 1754 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
USP47-202ENST00000339865 FHL1Q13642 323 aa9.82□□□□□ -0.84
USP47-202ENST00000339865 C2orf70A6NJV1 201 aa9.82□□□□□ -0.84
USP47-202ENST00000339865 LRRK2Q5S007 2527 aa9.82□□□□□ -0.84
USP47-202ENST00000339865 IMUPQ9GZP8 106 aa9.82□□□□□ -0.84
USP47-202ENST00000339865 PROK2Q9HC23 129 aa9.82□□□□□ -0.84
USP47-202ENST00000339865 HILS1P60008 231 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 FLG2Q5D862 2391 aaPredicted RBP9.81□□□□□ -0.84
USP47-202ENST00000339865 TRBV6-1A0A0K0K1D8 114 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 IGLV2-8P01709 118 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 DEFB1P60022 68 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 MIFP14174 115 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 C14orf177Q52M58 125 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 CRIPAKQ8N1N5 446 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 TRBV7-6A0A0J9YX20 115 aa9.81□□□□□ -0.84
USP47-202ENST00000339865 CTRLP40313 264 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 EBI3Q14213 229 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
USP47-202ENST00000339865 RITA1Q96K30 269 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 LRRC75A-AS1Q8N1F1 130 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 PRAC2D3DTV9 90 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 ODF3L1Q8IXM7 274 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 NUPR2A6NF83 97 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 MUC6Q6W4X9 2439 aa9.8□□□□□ -0.84
USP47-202ENST00000339865 FAM19A5Q7Z5A7 132 aaPredicted RBP9.8□□□□□ -0.84
USP47-202ENST00000339865 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
USP47-202ENST00000339865 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
USP47-202ENST00000339865 ZFAND2AQ8N6M9 145 aa9.79□□□□□ -0.84
USP47-202ENST00000339865 VWCEQ96DN2 955 aa9.79□□□□□ -0.84
USP47-202ENST00000339865 Q6ZS92 163 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms