RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ZNF883P0CG24 379 aa8.04□□□□□ -1.12
SPTBN1-201ENST00000333896 FLVCR1-AS1Q8TAF5 88 aa8.04□□□□□ -1.12
SPTBN1-201ENST00000333896 U3KQK5 164 aa8.04□□□□□ -1.12
SPTBN1-201ENST00000333896 FASNP49327 2511 aaKnown RBP8.04□□□□□ -1.12
SPTBN1-201ENST00000333896 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 IGHV4-31P0DP07 118 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 RNF144BQ7Z419 303 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 K7EQD1 137 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 G3V318 75 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 NDUFA4O00483 81 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 IGKV1D-17A0A075B6S4 117 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 FGF23Q9GZV9 251 aaPredicted RBP8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 LY6HO94772 140 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 C11orf1Q9H5F2 150 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 E9PLN8 166 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 BPESC1Q9GZL8 116 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 ZNF581Q9P0T4 197 aa8.03□□□□□ -1.12
SPTBN1-201ENST00000333896 FAM167A-AS1Q96KT0 104 aa8.02□□□□□ -1.12
SPTBN1-201ENST00000333896 NDUFA1O15239 70 aa8.02□□□□□ -1.13
SPTBN1-201ENST00000333896 COL4A1P02462 1669 aa8.02□□□□□ -1.13
SPTBN1-201ENST00000333896 WT1-ASQ06250 92 aa8.02□□□□□ -1.13
SPTBN1-201ENST00000333896 LST1O00453 97 aa8.02□□□□□ -1.13
SPTBN1-201ENST00000333896 TRIAP1O43715 76 aa8.02□□□□□ -1.13
SPTBN1-201ENST00000333896 GATA1P15976 413 aaPredicted RBP8.01□□□□□ -1.13
SPTBN1-201ENST00000333896 NRACQ8N912 160 aa8.01□□□□□ -1.13
SPTBN1-201ENST00000333896 COL8A2P25067 703 aa8.01□□□□□ -1.13
SPTBN1-201ENST00000333896 MIFP14174 115 aa8.01□□□□□ -1.13
SPTBN1-201ENST00000333896 CD164L2Q6UWJ8 174 aa8.01□□□□□ -1.13
SPTBN1-201ENST00000333896 IGHV4-61A0A0C4DH41 118 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 IGLV3-19P01714 112 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 Q6ZR03 302 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 C5orf63A6NC05 138 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 C15orf65H3BRN8 121 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 COX7BP24311 80 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 MAPK1IP1LQ8NDC0 245 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 SPRY2O43597 315 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 ESM1Q9NQ30 184 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 CCL18P55774 89 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 NAV2Q8IVL1 2488 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 PINLYPA6NC86 204 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 IGHV4-38-2P0DP08 117 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 IGHV7-4-1A0A0J9YVY3 117 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 F8WDY8 70 aa8□□□□□ -1.13
SPTBN1-201ENST00000333896 MRPS12O15235 138 aaKnown RBP7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 A0A0G2JNJ9 132 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 EIF4EBP1Q13541 118 aaPredicted RBP7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 Q9UFV3 132 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 PLA2G2AP14555 144 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 RPL39P62891 51 aaKnown RBP7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 CCDC140Q96MF4 163 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 FAM222AQ5U5X8 452 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
SPTBN1-201ENST00000333896 ITGBL1O95965 494 aaPredicted RBP7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 LRCOL1A6NCL2 159 aa7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 DEFB112Q30KQ8 113 aa7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 C9orf85Q96MD7 179 aa7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 C16orf74Q96GX8 76 aa7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 TRBV7-3A0A075B6L6 115 aa7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 H3BUA1 57 aa7.98□□□□□ -1.13
SPTBN1-201ENST00000333896 F8W735 103 aaPredicted RBP7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 CRYGAP11844 174 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 UBE2D3P61077 147 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 UBE2D2P62837 147 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 TRBV27A0A0K0K1C4 114 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 MSMBP08118 114 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 GATA3P23771 443 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 A0A0J9YX75 114 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 TMEM263Q8WUH6 116 aaKnown RBP7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 LOC107984640A0A0U1RRK4 108 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 HHLA3Q9XRX5 114 aa7.97□□□□□ -1.13
SPTBN1-201ENST00000333896 TP53TG3Q9ULZ0 132 aa7.96□□□□□ -1.13
SPTBN1-201ENST00000333896 A0A0J9YXV3 536 aa7.96□□□□□ -1.13
SPTBN1-201ENST00000333896 DIAPH2-AS1Q14236 149 aa7.96□□□□□ -1.13
SPTBN1-201ENST00000333896 APRG1Q8IVJ8 170 aa7.96□□□□□ -1.13
SPTBN1-201ENST00000333896 A0A096LNI7 61 aa7.96□□□□□ -1.13
SPTBN1-201ENST00000333896 USP9YO00507 2555 aaPredicted RBP7.96□□□□□ -1.13
SPTBN1-201ENST00000333896 GPHB5Q86YW7 130 aa7.96□□□□□ -1.14
SPTBN1-201ENST00000333896 H7C423 109 aa7.96□□□□□ -1.14
SPTBN1-201ENST00000333896 PRRC2CQ9Y520 2896 aaKnown RBP7.96□□□□□ -1.14
SPTBN1-201ENST00000333896 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.14
SPTBN1-201ENST00000333896 Q6ZSR3 168 aa7.95□□□□□ -1.14
SPTBN1-201ENST00000333896 C17orf58Q2M2W7 97 aa7.95□□□□□ -1.14
SPTBN1-201ENST00000333896 C3orf84H3BNL1 204 aa7.95□□□□□ -1.14
SPTBN1-201ENST00000333896 SPAG11BQ08648 103 aa7.95□□□□□ -1.14
SPTBN1-201ENST00000333896 Q8N9L7 120 aa7.95□□□□□ -1.14
SPTBN1-201ENST00000333896 TPSG1Q9NRR2 321 aa7.95□□□□□ -1.14
SPTBN1-201ENST00000333896 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
SPTBN1-201ENST00000333896 Q96MF0 132 aa7.94□□□□□ -1.14
SPTBN1-201ENST00000333896 CCL24O00175 119 aa7.94□□□□□ -1.14
SPTBN1-201ENST00000333896 NFE4Q86UQ8 179 aa7.94□□□□□ -1.14
SPTBN1-201ENST00000333896 MBD6Q96DN6 1003 aa7.93□□□□□ -1.14
SPTBN1-201ENST00000333896 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
SPTBN1-201ENST00000333896 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
SPTBN1-201ENST00000333896 J3QLI3 93 aa7.93□□□□□ -1.14
SPTBN1-201ENST00000333896 DEFB136Q30KP8 78 aa7.93□□□□□ -1.14
SPTBN1-201ENST00000333896 SPART-AS1P0CW21 52 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms