RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 YAE1D1Q9NRH1 226 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 LINC01006Q8NI28 216 aa10.54□□□□□ -0.72
TPM3-206ENST00000330188 TSSC4Q9Y5U2 329 aaPredicted RBP10.54□□□□□ -0.72
TPM3-206ENST00000330188 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
TPM3-206ENST00000330188 TMEM238LA0A1B0GVL6 79 aa10.54□□□□□ -0.72
TPM3-206ENST00000330188 A6NJY4 79 aa10.54□□□□□ -0.72
TPM3-206ENST00000330188 LEPROTO15243 131 aa10.54□□□□□ -0.72
TPM3-206ENST00000330188 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
TPM3-206ENST00000330188 CHCHD7Q9BUK0 85 aa10.54□□□□□ -0.72
TPM3-206ENST00000330188 C16orf95Q9H693 158 aa10.54□□□□□ -0.72
TPM3-206ENST00000330188 SPANXB1Q9NS25 103 aaPredicted RBP10.54□□□□□ -0.72
TPM3-206ENST00000330188 FLNAP21333 2647 aaKnown RBP10.53□□□□□ -0.72
TPM3-206ENST00000330188 K7ERU9 68 aa10.53□□□□□ -0.72
TPM3-206ENST00000330188 SAP30O75446 220 aa10.53□□□□□ -0.72
TPM3-206ENST00000330188 LGALS3P17931 250 aaKnown RBP10.53□□□□□ -0.72
TPM3-206ENST00000330188 UBE2D1P51668 147 aa10.53□□□□□ -0.72
TPM3-206ENST00000330188 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
TPM3-206ENST00000330188 ANK3Q12955 4377 aaKnown RBP10.52□□□□□ -0.72
TPM3-206ENST00000330188 CEMP1Q6PRD7 247 aaPredicted RBP10.52□□□□□ -0.72
TPM3-206ENST00000330188 SLC25A29Q8N8R3 303 aa10.52□□□□□ -0.72
TPM3-206ENST00000330188 IL17DQ8TAD2 202 aa10.52□□□□□ -0.72
TPM3-206ENST00000330188 PDZD2O15018 2839 aa10.52□□□□□ -0.72
TPM3-206ENST00000330188 CHD6Q8TD26 2715 aa10.52□□□□□ -0.73
TPM3-206ENST00000330188 CRYBA4P53673 196 aa10.52□□□□□ -0.73
TPM3-206ENST00000330188 IGHV3OR16-12A0A075B7B8 117 aa10.51□□□□□ -0.73
TPM3-206ENST00000330188 PLA2G2AP14555 144 aa10.51□□□□□ -0.73
TPM3-206ENST00000330188 UBE2D4Q9Y2X8 147 aa10.51□□□□□ -0.73
TPM3-206ENST00000330188 IGHV3-30P01768 117 aa10.51□□□□□ -0.73
TPM3-206ENST00000330188 IGHV3-30-5P0DP03 117 aa10.51□□□□□ -0.73
TPM3-206ENST00000330188 MRPS36P82909 103 aaKnown RBP10.51□□□□□ -0.73
TPM3-206ENST00000330188 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
TPM3-206ENST00000330188 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
TPM3-206ENST00000330188 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
TPM3-206ENST00000330188 IGHV3-38A0A0C4DH36 116 aa10.5□□□□□ -0.73
TPM3-206ENST00000330188 RNASE13Q5GAN3 156 aaKnown RBP10.5□□□□□ -0.73
TPM3-206ENST00000330188 SPANXA1Q9NS26 97 aa10.5□□□□□ -0.73
TPM3-206ENST00000330188 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.49□□□□□ -0.73
TPM3-206ENST00000330188 IGKV2-29A2NJV5 120 aaPredicted RBP10.49□□□□□ -0.73
TPM3-206ENST00000330188 CCDC168Q8NDH2 2452 aa10.49□□□□□ -0.73
TPM3-206ENST00000330188 COTL1Q14019 142 aa10.49□□□□□ -0.73
TPM3-206ENST00000330188 TRGV1A0A0A0MS02 117 aa10.48□□□□□ -0.73
TPM3-206ENST00000330188 H3BMG7 143 aa10.48□□□□□ -0.73
TPM3-206ENST00000330188 J3QKU1 62 aa10.48□□□□□ -0.73
TPM3-206ENST00000330188 VPS25Q9BRG1 176 aa10.48□□□□□ -0.73
TPM3-206ENST00000330188 APOMO95445 188 aa10.48□□□□□ -0.73
TPM3-206ENST00000330188 NF1P21359 2839 aa10.47□□□□□ -0.73
TPM3-206ENST00000330188 G3V4G9 280 aa10.47□□□□□ -0.73
TPM3-206ENST00000330188 TSPAN13O95857 204 aa10.47□□□□□ -0.73
TPM3-206ENST00000330188 Q6ZUT4 128 aa10.47□□□□□ -0.73
TPM3-206ENST00000330188 NDUFA11Q86Y39 141 aa10.47□□□□□ -0.73
TPM3-206ENST00000330188 GIG44P09565 113 aaPredicted RBP10.46□□□□□ -0.73
TPM3-206ENST00000330188 IGHV3-30-3P0DP02 117 aa10.46□□□□□ -0.73
TPM3-206ENST00000330188 TMEM263Q8WUH6 116 aaKnown RBP10.46□□□□□ -0.73
TPM3-206ENST00000330188 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.74
TPM3-206ENST00000330188 ADARB2-AS1A8MUL3 147 aa10.46□□□□□ -0.74
TPM3-206ENST00000330188 F8W1H4 67 aa10.46□□□□□ -0.74
TPM3-206ENST00000330188 CFC1BP0CG36 223 aa10.46□□□□□ -0.74
TPM3-206ENST00000330188 CFC1P0CG37 223 aa10.46□□□□□ -0.74
TPM3-206ENST00000330188 C10orf126Q8N4M7 172 aa10.46□□□□□ -0.74
TPM3-206ENST00000330188 TIMM21Q9BVV7 248 aa10.46□□□□□ -0.74
TPM3-206ENST00000330188 IGLV1-51P01701 117 aa10.45□□□□□ -0.74
TPM3-206ENST00000330188 CMC4P56277 68 aaPredicted RBP10.45□□□□□ -0.74
TPM3-206ENST00000330188 Q6ZTI0 123 aa10.45□□□□□ -0.74
TPM3-206ENST00000330188 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
TPM3-206ENST00000330188 C19orf73Q9NVV2 129 aa10.45□□□□□ -0.74
TPM3-206ENST00000330188 HILS1P60008 231 aa10.45□□□□□ -0.74
TPM3-206ENST00000330188 WFDC2Q14508 124 aa10.45□□□□□ -0.74
TPM3-206ENST00000330188 ZNF418Q8TF45 676 aaPredicted RBP10.45□□□□□ -0.74
TPM3-206ENST00000330188 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
TPM3-206ENST00000330188 FAM110AQ9BQ89 295 aa10.44□□□□□ -0.74
TPM3-206ENST00000330188 KMT2BQ9UMN6 2715 aaPredicted RBP10.43□□□□□ -0.74
TPM3-206ENST00000330188 TRAV4A0A0B4J268 109 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 IGHV1-58A0A0C4DH39 117 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 A0A0J9YXY3 114 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 K7EQD1 137 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 PCP4P48539 62 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 PRO0461Q9UI25 63 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 UBE2D3P61077 147 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 UBE2D2P62837 147 aa10.43□□□□□ -0.74
TPM3-206ENST00000330188 RPL24P83731 157 aaKnown RBP10.43□□□□□ -0.74
TPM3-206ENST00000330188 ACANP16112 2415 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 TMEM238C9JI98 176 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 NDUFA7O95182 113 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 GAGE13Q4V321 117 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 A4D1N5 150 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 SFTA2Q6UW10 78 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 MTURNQ8N3F0 131 aa10.42□□□□□ -0.74
TPM3-206ENST00000330188 NOP10Q9NPE3 64 aaKnown RBP10.42□□□□□ -0.74
TPM3-206ENST00000330188 LOC107984156A0A0G2JMH3 177 aa10.41□□□□□ -0.74
TPM3-206ENST00000330188 PLAC8L1A1L4L8 177 aa10.41□□□□□ -0.74
TPM3-206ENST00000330188 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
TPM3-206ENST00000330188 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
TPM3-206ENST00000330188 RPL36AP83881 106 aaKnown RBP10.41□□□□□ -0.74
TPM3-206ENST00000330188 DAZ2Q13117 558 aaKnown RBP10.41□□□□□ -0.74
TPM3-206ENST00000330188 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
TPM3-206ENST00000330188 ARL17AQ8IVW1 177 aa10.41□□□□□ -0.74
TPM3-206ENST00000330188 RPL36ALQ969Q0 106 aaKnown RBP10.41□□□□□ -0.74
TPM3-206ENST00000330188 VSIG2Q96IQ7 327 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms