RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ETDCA0A1B0GVM5 59 aa10.02□□□□□ -0.81
SNED1-201ENST00000310397 MP68P56378 58 aa10.02□□□□□ -0.81
SNED1-201ENST00000310397 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.81
SNED1-201ENST00000310397 DEFB105AQ8NG35 78 aa10.02□□□□□ -0.81
SNED1-201ENST00000310397 USP9XQ93008 2570 aaPredicted RBP10.02□□□□□ -0.81
SNED1-201ENST00000310397 IGF2RP11717 2491 aa10.01□□□□□ -0.81
SNED1-201ENST00000310397 MSMPQ1L6U9 139 aa10.01□□□□□ -0.81
SNED1-201ENST00000310397 CAMK2N2Q96S95 79 aa10.01□□□□□ -0.81
SNED1-201ENST00000310397 IGKV2D-24A0A075B6R9 120 aa10□□□□□ -0.81
SNED1-201ENST00000310397 C2orf91Q6ZV80 131 aa10□□□□□ -0.81
SNED1-201ENST00000310397 IGHV4OR15-8A0A075B7B6 117 aa10□□□□□ -0.81
SNED1-201ENST00000310397 A0A087WW49 117 aa10□□□□□ -0.81
SNED1-201ENST00000310397 MYCNOSP40205 109 aa10□□□□□ -0.81
SNED1-201ENST00000310397 IMUPQ9GZP8 106 aa10□□□□□ -0.81
SNED1-201ENST00000310397 UNQ9165/PRO28630Q6UXU0 137 aa10□□□□□ -0.81
SNED1-201ENST00000310397 A0A0J9YY99 117 aa10□□□□□ -0.81
SNED1-201ENST00000310397 NDUFS5O43920 106 aa10□□□□□ -0.81
SNED1-201ENST00000310397 ABCA12Q86UK0 2595 aa10□□□□□ -0.81
SNED1-201ENST00000310397 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
SNED1-201ENST00000310397 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
SNED1-201ENST00000310397 NFE4Q86UQ8 179 aa9.99□□□□□ -0.81
SNED1-201ENST00000310397 ATP5EP2Q5VTU8 51 aa9.99□□□□□ -0.81
SNED1-201ENST00000310397 NDUFA1O15239 70 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 CRIP1P50238 77 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 UBE2BP63146 152 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 TP73-AS1Q9UF72 201 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 DIRC1Q969H9 104 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 ZFP36P26651 326 aaKnown RBP9.98□□□□□ -0.81
SNED1-201ENST00000310397 SIRPDQ9H106 197 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 IGLV10-54A0A075B6I4 117 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 IGKV2D-26A0A0A0MRZ7 120 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
SNED1-201ENST00000310397 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
SNED1-201ENST00000310397 C10orf105Q8TEF2 133 aa9.97□□□□□ -0.81
SNED1-201ENST00000310397 IGHV4-30-2A0A087WSY4 118 aa9.97□□□□□ -0.81
SNED1-201ENST00000310397 ODF3BA8MYP8 253 aa9.97□□□□□ -0.81
SNED1-201ENST00000310397 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
SNED1-201ENST00000310397 C4orf3Q8WVX3 66 aa9.96□□□□□ -0.81
SNED1-201ENST00000310397 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.81
SNED1-201ENST00000310397 ANKRD11Q6UB99 2663 aaPredicted RBP9.96□□□□□ -0.81
SNED1-201ENST00000310397 PRRC2CQ9Y520 2896 aaKnown RBP9.96□□□□□ -0.81
SNED1-201ENST00000310397 IGHV3-33P01772 117 aa9.96□□□□□ -0.81
SNED1-201ENST00000310397 RNF185Q96GF1 192 aa9.96□□□□□ -0.81
SNED1-201ENST00000310397 NCOR2Q9Y618 2525 aa9.96□□□□□ -0.82
SNED1-201ENST00000310397 H7C423 109 aa9.96□□□□□ -0.82
SNED1-201ENST00000310397 SPATA25Q9BR10 227 aa9.96□□□□□ -0.82
SNED1-201ENST00000310397 IGHV4-4A0A075B6R2 117 aa9.96□□□□□ -0.82
SNED1-201ENST00000310397 IGLV2-11P01706 119 aa9.96□□□□□ -0.82
SNED1-201ENST00000310397 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
SNED1-201ENST00000310397 SVIPQ8NHG7 77 aa9.95□□□□□ -0.82
SNED1-201ENST00000310397 PLA2G5P39877 138 aa9.95□□□□□ -0.82
SNED1-201ENST00000310397 TRBV12-3P01733 135 aa9.95□□□□□ -0.82
SNED1-201ENST00000310397 MAPKAPK5-AS1Q8N8E1 139 aa9.95□□□□□ -0.82
SNED1-201ENST00000310397 NDUFB1O75438 58 aa9.95□□□□□ -0.82
SNED1-201ENST00000310397 C3orf22Q8N5N4 141 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 DAZAP2Q15038 168 aaPredicted RBP9.94□□□□□ -0.82
SNED1-201ENST00000310397 PKD1L2Q7Z442 2459 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 TIMM17BO60830 172 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 DEFB1P60022 68 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 USP9YO00507 2555 aaPredicted RBP9.94□□□□□ -0.82
SNED1-201ENST00000310397 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 TRIAP1O43715 76 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 IGLV4-3A0A075B6K6 122 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 CHKB-CPT1BH3BT56 60 aa9.94□□□□□ -0.82
SNED1-201ENST00000310397 Q9HAA7 133 aa9.93□□□□□ -0.82
SNED1-201ENST00000310397 PRB1P04280 392 aa9.93□□□□□ -0.82
SNED1-201ENST00000310397 IGF1P05019 195 aa9.93□□□□□ -0.82
SNED1-201ENST00000310397 GOLGB1Q14789 3259 aaKnown RBP9.93□□□□□ -0.82
SNED1-201ENST00000310397 C1orf229Q6ZS94 237 aaPredicted RBP9.93□□□□□ -0.82
SNED1-201ENST00000310397 NRACQ8N912 160 aa9.93□□□□□ -0.82
SNED1-201ENST00000310397 WFDC9Q8NEX5 89 aa9.93□□□□□ -0.82
SNED1-201ENST00000310397 CNFNQ9BYD5 112 aa9.93□□□□□ -0.82
SNED1-201ENST00000310397 A0A1W2PNU3 283 aaPredicted RBP9.93□□□□□ -0.82
SNED1-201ENST00000310397 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
SNED1-201ENST00000310397 ADORA2A-AS1P86434 159 aa9.93□□□□□ -0.82
SNED1-201ENST00000310397 TRAV23DV6A0A075B6W5 121 aa9.92□□□□□ -0.82
SNED1-201ENST00000310397 DEFB113Q30KQ7 82 aa9.92□□□□□ -0.82
SNED1-201ENST00000310397 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
SNED1-201ENST00000310397 TIRAPP58753 221 aa9.92□□□□□ -0.82
SNED1-201ENST00000310397 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
SNED1-201ENST00000310397 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 ZMAT4Q9H898 229 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 M0QY20 66 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 PRO0255Q9UI72 69 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 A6NDX4 124 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 EBI3Q14213 229 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 LINC00308Q8TCZ7 52 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 TRBV6-5A0A0K0K1A5 114 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 CDKN2A-AS1Q9UH64 79 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 IBA57-AS1B1ANH7 110 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
SNED1-201ENST00000310397 NCR3O14931 201 aa9.9□□□□□ -0.82
SNED1-201ENST00000310397 CEMP1Q6PRD7 247 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms