RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MBD6Q96DN6 1003 aa10.52□□□□□ -0.73
PRKCB-201ENST00000303531 Q6ZTI0 123 aa10.52□□□□□ -0.73
PRKCB-201ENST00000303531 C20orf173Q96LM9 149 aa10.52□□□□□ -0.73
PRKCB-201ENST00000303531 IGF1P05019 195 aa10.51□□□□□ -0.73
PRKCB-201ENST00000303531 CUL9Q8IWT3 2517 aa10.51□□□□□ -0.73
PRKCB-201ENST00000303531 PRB2P02812 416 aaPredicted RBP10.51□□□□□ -0.73
PRKCB-201ENST00000303531 CRYGBP07316 175 aa10.51□□□□□ -0.73
PRKCB-201ENST00000303531 SMIM20Q8N5G0 67 aa10.51□□□□□ -0.73
PRKCB-201ENST00000303531 C19orf84I3L1E1 186 aa10.51□□□□□ -0.73
PRKCB-201ENST00000303531 UBE2AP49459 152 aa10.51□□□□□ -0.73
PRKCB-201ENST00000303531 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
PRKCB-201ENST00000303531 TMEM256-PLSCR3K7ERE1 68 aa10.5□□□□□ -0.73
PRKCB-201ENST00000303531 ODF3Q96PU9 254 aa10.5□□□□□ -0.73
PRKCB-201ENST00000303531 NDUFB1O75438 58 aa10.5□□□□□ -0.73
PRKCB-201ENST00000303531 NEXN-AS1Q8NBZ9 246 aa10.5□□□□□ -0.73
PRKCB-201ENST00000303531 C5orf47Q569G3 176 aa10.5□□□□□ -0.73
PRKCB-201ENST00000303531 MP68P56378 58 aa10.49□□□□□ -0.73
PRKCB-201ENST00000303531 WFDC11Q8NEX6 87 aa10.49□□□□□ -0.73
PRKCB-201ENST00000303531 SMAD5-AS1Q9Y6J3 95 aa10.49□□□□□ -0.73
PRKCB-201ENST00000303531 ALPK3Q96L96 1907 aa10.49□□□□□ -0.73
PRKCB-201ENST00000303531 C14orf132Q9NPU4 83 aa10.49□□□□□ -0.73
PRKCB-201ENST00000303531 K7EQG2 157 aa10.49□□□□□ -0.73
PRKCB-201ENST00000303531 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
PRKCB-201ENST00000303531 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
PRKCB-201ENST00000303531 HIGD2BQ4VC39 106 aa10.48□□□□□ -0.73
PRKCB-201ENST00000303531 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
PRKCB-201ENST00000303531 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
PRKCB-201ENST00000303531 INSL3P51460 131 aa10.48□□□□□ -0.73
PRKCB-201ENST00000303531 CRIP1P50238 77 aa10.48□□□□□ -0.73
PRKCB-201ENST00000303531 IGKV2D-26A0A0A0MRZ7 120 aa10.48□□□□□ -0.73
PRKCB-201ENST00000303531 NUP210LQ5VU65 1888 aa10.47□□□□□ -0.73
PRKCB-201ENST00000303531 TM2D2Q9BX73 214 aa10.47□□□□□ -0.73
PRKCB-201ENST00000303531 ZFAND3Q9H8U3 227 aa10.47□□□□□ -0.73
PRKCB-201ENST00000303531 LY6LH3BQJ8 138 aa10.47□□□□□ -0.73
PRKCB-201ENST00000303531 LINC00269Q8N2A0 174 aa10.47□□□□□ -0.73
PRKCB-201ENST00000303531 HIST2H2BDQ6DRA6 164 aa10.46□□□□□ -0.73
PRKCB-201ENST00000303531 COX7BP24311 80 aa10.46□□□□□ -0.74
PRKCB-201ENST00000303531 Q6YL49 198 aa10.46□□□□□ -0.74
PRKCB-201ENST00000303531 YPEL4Q96NS1 127 aa10.46□□□□□ -0.74
PRKCB-201ENST00000303531 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.74
PRKCB-201ENST00000303531 FSTL3O95633 263 aa10.45□□□□□ -0.74
PRKCB-201ENST00000303531 DEFB114Q30KQ6 69 aa10.45□□□□□ -0.74
PRKCB-201ENST00000303531 REG3AQ06141 175 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 EBI3Q14213 229 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
PRKCB-201ENST00000303531 CEP192Q8TEP8 1941 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 CHKB-CPT1BH3BT56 60 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 IGHV4-31P0DP07 118 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 RNF185Q96GF1 192 aa10.44□□□□□ -0.74
PRKCB-201ENST00000303531 LINC00643Q86TS7 51 aa10.43□□□□□ -0.74
PRKCB-201ENST00000303531 J3KT08 172 aa10.43□□□□□ -0.74
PRKCB-201ENST00000303531 FAM222AQ5U5X8 452 aa10.43□□□□□ -0.74
PRKCB-201ENST00000303531 MAPKAPK5-AS1Q8N8E1 139 aa10.43□□□□□ -0.74
PRKCB-201ENST00000303531 TEX49A0A1B0GTD5 131 aa10.43□□□□□ -0.74
PRKCB-201ENST00000303531 U3KQK5 164 aa10.43□□□□□ -0.74
PRKCB-201ENST00000303531 PRORYQ9H606 182 aa10.42□□□□□ -0.74
PRKCB-201ENST00000303531 PDE6GP18545 87 aa10.42□□□□□ -0.74
PRKCB-201ENST00000303531 UFSP1Q6NVU6 142 aa10.42□□□□□ -0.74
PRKCB-201ENST00000303531 M0QY20 66 aa10.42□□□□□ -0.74
PRKCB-201ENST00000303531 IGLV2-11P01706 119 aa10.42□□□□□ -0.74
PRKCB-201ENST00000303531 CHCHD10Q8WYQ3 142 aaPredicted RBP10.41□□□□□ -0.74
PRKCB-201ENST00000303531 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
PRKCB-201ENST00000303531 C10orf99Q6UWK7 81 aa10.4□□□□□ -0.74
PRKCB-201ENST00000303531 LRRC75A-AS1Q8N1F1 130 aa10.4□□□□□ -0.74
PRKCB-201ENST00000303531 C11orf45Q8TAV5 145 aa10.4□□□□□ -0.74
PRKCB-201ENST00000303531 NAV3Q8IVL0 2385 aa10.4□□□□□ -0.74
PRKCB-201ENST00000303531 SPANXB1Q9NS25 103 aaPredicted RBP10.4□□□□□ -0.75
PRKCB-201ENST00000303531 PROK1P58294 105 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 IGKV2-24A0A0C4DH68 120 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 MT-ATP8P03928 68 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 C11orf71Q6IPW1 123 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 H7C423 109 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 LINC00308Q8TCZ7 52 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 UPK3BQ9BT76 320 aa10.39□□□□□ -0.75
PRKCB-201ENST00000303531 KLK5Q9Y337 293 aaPredicted RBP10.38□□□□□ -0.75
PRKCB-201ENST00000303531 PIK3CD-AS1Q5SR53 167 aa10.38□□□□□ -0.75
PRKCB-201ENST00000303531 H0Y9J4 135 aa10.38□□□□□ -0.75
PRKCB-201ENST00000303531 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
PRKCB-201ENST00000303531 FAM110AQ9BQ89 295 aa10.38□□□□□ -0.75
PRKCB-201ENST00000303531 SPATA25Q9BR10 227 aa10.37□□□□□ -0.75
PRKCB-201ENST00000303531 TRIAP1O43715 76 aa10.37□□□□□ -0.75
PRKCB-201ENST00000303531 ARHGAP32A7KAX9 2087 aa10.37□□□□□ -0.75
PRKCB-201ENST00000303531 C2CD3Q4AC94 2353 aa10.37□□□□□ -0.75
PRKCB-201ENST00000303531 SLPIP03973 132 aa10.37□□□□□ -0.75
PRKCB-201ENST00000303531 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
PRKCB-201ENST00000303531 RNF183Q96D59 192 aa10.36□□□□□ -0.75
PRKCB-201ENST00000303531 BPY2O14599 106 aa10.36□□□□□ -0.75
PRKCB-201ENST00000303531 Q6ZSV7 163 aa10.36□□□□□ -0.75
PRKCB-201ENST00000303531 TRBV6-8A0A0A6YYG3 113 aa10.36□□□□□ -0.75
PRKCB-201ENST00000303531 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
PRKCB-201ENST00000303531 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
PRKCB-201ENST00000303531 TRBV27A0A0K0K1C4 114 aa10.35□□□□□ -0.75
PRKCB-201ENST00000303531 NDUFV3P56181 108 aaKnown RBP10.35□□□□□ -0.75
PRKCB-201ENST00000303531 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
PRKCB-201ENST00000303531 NRACQ8N912 160 aa10.35□□□□□ -0.75
PRKCB-201ENST00000303531 C4orf48Q5BLP8 95 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms