RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 NF1P21359 2839 aa17.85■□□□□ 0.45
SPTSSA-201ENST00000298130 FHL3Q13643 280 aa17.85■□□□□ 0.45
SPTSSA-201ENST00000298130 FAM104AQ969W3 186 aa17.85■□□□□ 0.45
SPTSSA-201ENST00000298130 LEPROTO15243 131 aa17.84■□□□□ 0.45
SPTSSA-201ENST00000298130 SPATA25Q9BR10 227 aa17.84■□□□□ 0.45
SPTSSA-201ENST00000298130 AKAP9Q99996 3911 aa17.83■□□□□ 0.45
SPTSSA-201ENST00000298130 TRGV11A0A075B6L2 103 aa17.83■□□□□ 0.45
SPTSSA-201ENST00000298130 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.83■□□□□ 0.45
SPTSSA-201ENST00000298130 IGKV2-29A2NJV5 120 aaPredicted RBP17.83■□□□□ 0.45
SPTSSA-201ENST00000298130 GATA3P23771 443 aa17.82■□□□□ 0.44
SPTSSA-201ENST00000298130 TMEM61Q8N0U2 210 aa17.82■□□□□ 0.44
SPTSSA-201ENST00000298130 A0A096LNT2 108 aa17.82■□□□□ 0.44
SPTSSA-201ENST00000298130 CARD19Q96LW7 228 aa17.82■□□□□ 0.44
SPTSSA-201ENST00000298130 CCDC168Q8NDH2 2452 aa17.82■□□□□ 0.44
SPTSSA-201ENST00000298130 NIPBLQ6KC79 2804 aaeCLIP17.81■□□□□ 0.44
SPTSSA-201ENST00000298130 PRSS2P07478 247 aa17.81■□□□□ 0.44
SPTSSA-201ENST00000298130 ELANEP08246 267 aa17.81■□□□□ 0.44
SPTSSA-201ENST00000298130 KRTAP10-9P60411 292 aa17.81■□□□□ 0.44
SPTSSA-201ENST00000298130 UBE2E2Q96LR5 201 aa17.81■□□□□ 0.44
SPTSSA-201ENST00000298130 TNFRSF18Q9Y5U5 241 aa17.81■□□□□ 0.44
SPTSSA-201ENST00000298130 IGHV3-30-3P0DP02 117 aa17.8■□□□□ 0.44
SPTSSA-201ENST00000298130 C11orf44Q8N8P7 122 aa17.79■□□□□ 0.44
SPTSSA-201ENST00000298130 H3BMM0 161 aa17.79■□□□□ 0.44
SPTSSA-201ENST00000298130 Q1RN00 199 aa17.79■□□□□ 0.44
SPTSSA-201ENST00000298130 JMJD1CQ15652 2540 aa17.79■□□□□ 0.44
SPTSSA-201ENST00000298130 Q6ZSV7 163 aa17.78■□□□□ 0.44
SPTSSA-201ENST00000298130 A0A0J9YXY3 114 aa17.78■□□□□ 0.44
SPTSSA-201ENST00000298130 IGHV3OR16-12A0A075B7B8 117 aa17.77■□□□□ 0.44
SPTSSA-201ENST00000298130 SPINK8P0C7L1 97 aa17.77■□□□□ 0.44
SPTSSA-201ENST00000298130 Q6YL49 198 aa17.77■□□□□ 0.44
SPTSSA-201ENST00000298130 TIMM21Q9BVV7 248 aa17.77■□□□□ 0.43
SPTSSA-201ENST00000298130 CDIP1Q9H305 208 aa17.77■□□□□ 0.43
SPTSSA-201ENST00000298130 IGHV3-33P01772 117 aa17.76■□□□□ 0.43
SPTSSA-201ENST00000298130 TMEM263Q8WUH6 116 aaKnown RBP17.76■□□□□ 0.43
SPTSSA-201ENST00000298130 LINC01587Q99440 93 aa17.76■□□□□ 0.43
SPTSSA-201ENST00000298130 ADAMTSL4-AS1Q5T5F5 129 aa17.76■□□□□ 0.43
SPTSSA-201ENST00000298130 ANKRD29Q8N6D5 301 aa17.76■□□□□ 0.43
SPTSSA-201ENST00000298130 C9JAW5 83 aa17.75■□□□□ 0.43
SPTSSA-201ENST00000298130 TMEM89A2RUT3 159 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 DSCR9P59020 149 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 ERG28Q9UKR5 140 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 MT-ATP8P03928 68 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 NBPF19A0A087WUL8 3843 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 A8MWV9 139 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 DAND5Q8N907 189 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 LINC00467Q9BRT7 94 aa17.74■□□□□ 0.43
SPTSSA-201ENST00000298130 Q6ZUT4 128 aa17.73■□□□□ 0.43
SPTSSA-201ENST00000298130 TEN1Q86WV5 123 aa17.73■□□□□ 0.43
SPTSSA-201ENST00000298130 M0R2P5 195 aa17.72■□□□□ 0.43
SPTSSA-201ENST00000298130 IGHV4-31P0DP07 118 aa17.72■□□□□ 0.43
SPTSSA-201ENST00000298130 LYRM7Q5U5X0 104 aa17.72■□□□□ 0.43
SPTSSA-201ENST00000298130 CHCHD7Q9BUK0 85 aa17.72■□□□□ 0.43
SPTSSA-201ENST00000298130 XCL2Q9UBD3 114 aa17.72■□□□□ 0.43
SPTSSA-201ENST00000298130 MAP6D1Q9H9H5 199 aa17.71■□□□□ 0.43
SPTSSA-201ENST00000298130 USP24Q9UPU5 2620 aa17.7■□□□□ 0.42
SPTSSA-201ENST00000298130 TRBV20-1A0A075B6N2 111 aa17.7■□□□□ 0.42
SPTSSA-201ENST00000298130 XGP55808 180 aa17.7■□□□□ 0.42
SPTSSA-201ENST00000298130 DYNLRB2Q8TF09 96 aa17.7■□□□□ 0.42
SPTSSA-201ENST00000298130 SLC25A20O43772 301 aa17.69■□□□□ 0.42
SPTSSA-201ENST00000298130 MRPS36P82909 103 aaKnown RBP17.69■□□□□ 0.42
SPTSSA-201ENST00000298130 PPDPFLQ8WWR9 84 aa17.69■□□□□ 0.42
SPTSSA-201ENST00000298130 NDUFA12Q9UI09 145 aa17.69■□□□□ 0.42
SPTSSA-201ENST00000298130 A0A1W2PRX2 142 aa17.69■□□□□ 0.42
SPTSSA-201ENST00000298130 ATP6V0E2Q8NHE4 81 aa17.69■□□□□ 0.42
SPTSSA-201ENST00000298130 LITAFQ99732 161 aa17.69■□□□□ 0.42
SPTSSA-201ENST00000298130 UBE2D4Q9Y2X8 147 aa17.68■□□□□ 0.42
SPTSSA-201ENST00000298130 J3QLI3 93 aa17.68■□□□□ 0.42
SPTSSA-201ENST00000298130 A0A0U1RRA0 63 aa17.68■□□□□ 0.42
SPTSSA-201ENST00000298130 ZNF415Q09FC8 603 aa17.67■□□□□ 0.42
SPTSSA-201ENST00000298130 IGHV3-53P01767 116 aa17.67■□□□□ 0.42
SPTSSA-201ENST00000298130 NDUFA7O95182 113 aa17.66■□□□□ 0.42
SPTSSA-201ENST00000298130 PYGO1Q9Y3Y4 419 aa17.66■□□□□ 0.42
SPTSSA-201ENST00000298130 CR1P17927 2039 aa17.66■□□□□ 0.42
SPTSSA-201ENST00000298130 IGHV1-58A0A0C4DH39 117 aa17.66■□□□□ 0.42
SPTSSA-201ENST00000298130 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.66■□□□□ 0.42
SPTSSA-201ENST00000298130 C11orf72Q8NBR9 251 aa17.65■□□□□ 0.42
SPTSSA-201ENST00000298130 ZNF625Q96I27 306 aaPredicted RBP17.65■□□□□ 0.42
SPTSSA-201ENST00000298130 TRIAP1O43715 76 aa17.64■□□□□ 0.41
SPTSSA-201ENST00000298130 CDKN2A-AS1Q9UH64 79 aa17.64■□□□□ 0.41
SPTSSA-201ENST00000298130 A0A0B4J2C4 111 aa17.64■□□□□ 0.41
SPTSSA-201ENST00000298130 FSHBP01225 129 aa17.63■□□□□ 0.41
SPTSSA-201ENST00000298130 VSIG2Q96IQ7 327 aa17.63■□□□□ 0.41
SPTSSA-201ENST00000298130 Q5PR19 223 aa17.63■□□□□ 0.41
SPTSSA-201ENST00000298130 SBSPONQ8IVN8 264 aa17.63■□□□□ 0.41
SPTSSA-201ENST00000298130 RNF152Q8N8N0 203 aa17.63■□□□□ 0.41
SPTSSA-201ENST00000298130 GEMIN7Q9H840 131 aaKnown RBP17.63■□□□□ 0.41
SPTSSA-201ENST00000298130 SCGB1A1P11684 91 aa17.62■□□□□ 0.41
SPTSSA-201ENST00000298130 BBC3Q96PG8 261 aaPredicted RBP17.62■□□□□ 0.41
SPTSSA-201ENST00000298130 COX6A2Q02221 97 aa17.62■□□□□ 0.41
SPTSSA-201ENST00000298130 DEFB114Q30KQ6 69 aa17.61■□□□□ 0.41
SPTSSA-201ENST00000298130 NTN5Q8WTR8 489 aaPredicted RBP17.61■□□□□ 0.41
SPTSSA-201ENST00000298130 CKS1BP61024 79 aa17.61■□□□□ 0.41
SPTSSA-201ENST00000298130 PEMTQ9UBM1 199 aa17.61■□□□□ 0.41
SPTSSA-201ENST00000298130 ACANP16112 2415 aa17.6■□□□□ 0.41
SPTSSA-201ENST00000298130 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.6■□□□□ 0.41
SPTSSA-201ENST00000298130 Q96MF0 132 aa17.6■□□□□ 0.41
SPTSSA-201ENST00000298130 ITPR3Q14573 2671 aa17.6■□□□□ 0.41
SPTSSA-201ENST00000298130 DGAT2L7PQ6IED9 249 aa17.6■□□□□ 0.41
SPTSSA-201ENST00000298130 MTORP42345 2549 aa17.6■□□□□ 0.41
SPTSSA-201ENST00000298130 APCP25054 2843 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms