RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 IGHV3-30-3P0DP02 117 aa8.61□□□□□ -1.03
NPC1L1-201ENST00000289547 CEP350Q5VT06 3117 aa8.61□□□□□ -1.03
NPC1L1-201ENST00000289547 CENPFP49454 3210 aa8.61□□□□□ -1.03
NPC1L1-201ENST00000289547 WI2-2373I1.2A0A1W2PRP0 233 aa8.61□□□□□ -1.03
NPC1L1-201ENST00000289547 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
NPC1L1-201ENST00000289547 TRAV23DV6A0A075B6W5 121 aa8.6□□□□□ -1.03
NPC1L1-201ENST00000289547 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
NPC1L1-201ENST00000289547 TEX22C9J3V5 150 aa8.6□□□□□ -1.03
NPC1L1-201ENST00000289547 LY6LH3BQJ8 138 aa8.6□□□□□ -1.03
NPC1L1-201ENST00000289547 IGHV3-33P01772 117 aa8.6□□□□□ -1.03
NPC1L1-201ENST00000289547 LINC01006Q8NI28 216 aa8.6□□□□□ -1.03
NPC1L1-201ENST00000289547 F5H768 121 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 F8WEM9 126 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 PRB2P02812 416 aaPredicted RBP8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 TMEM61Q8N0U2 210 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 CHD8Q9HCK8 2581 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 A0A0U1RQV1 116 aa8.59□□□□□ -1.03
NPC1L1-201ENST00000289547 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 TRIAP1O43715 76 aa8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 DAZ4Q86SG3 579 aaKnown RBP8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 CPAMD8Q8IZJ3 1885 aa8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 DAZ3Q9NR90 486 aaKnown RBP8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 CSPG4Q6UVK1 2322 aa8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 C5orf38Q86SI9 138 aa8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 CRIP1P50238 77 aa8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 DEFB1P60022 68 aa8.58□□□□□ -1.04
NPC1L1-201ENST00000289547 PRRC2AP48634 2157 aaKnown RBP8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 EIF4EBP1Q13541 118 aaPredicted RBP8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 C9orf47Q6ZRZ4 202 aa8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 MIAQ16674 131 aa8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 CCDC168Q8NDH2 2452 aa8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 COX7B2Q8TF08 81 aa8.57□□□□□ -1.04
NPC1L1-201ENST00000289547 PSCAO43653 123 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 RNF152Q8N8N0 203 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 U3KQK5 164 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 DNAH12Q6ZR08 3092 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 JMJD7-PLA2G4BH0Y9G9 81 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 P0DMU3 169 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 FAM231AP0DMU4 169 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 FAM231CP0DMU5 169 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 VSIG2Q96IQ7 327 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 COX7A2LO14548 114 aa8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
NPC1L1-201ENST00000289547 TRBV7-3A0A075B6L6 115 aa8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 ZNF462Q96JM2 2506 aa8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 XCL1P47992 114 aa8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 CLPSL2Q6UWE3 100 aa8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 KLK5Q9Y337 293 aaPredicted RBP8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 TANC2Q9HCD6 1990 aa8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 AVPP01185 164 aa8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 U3KQE9 123 aa8.55□□□□□ -1.04
NPC1L1-201ENST00000289547 TRBV30A0A0K0K1B3 111 aa8.54□□□□□ -1.04
NPC1L1-201ENST00000289547 CEMP1Q6PRD7 247 aaPredicted RBP8.54□□□□□ -1.04
NPC1L1-201ENST00000289547 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
NPC1L1-201ENST00000289547 IMUPQ9GZP8 106 aa8.54□□□□□ -1.04
NPC1L1-201ENST00000289547 MPLKIPQ8TAP9 179 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 SPART-AS1P0CW21 52 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 MED14OSP0DP75 135 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 MIR7-3HGQ8N6C7 128 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 NAV3Q8IVL0 2385 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 COX7CP15954 63 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 V9GYY9 64 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 IGHV3-30P01768 117 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 IGHV3-30-5P0DP03 117 aa8.53□□□□□ -1.04
NPC1L1-201ENST00000289547 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 SORL1Q92673 2214 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 PKD1L2Q7Z442 2459 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 EXPH5Q8NEV8 1989 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 ZNF561-AS1K7EIQ3 104 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 FANCD2OSQ96PS1 177 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 FAM110AQ9BQ89 295 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 Q6Q795 121 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 Q6ZQT7 251 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 IGLV2-11P01706 119 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 ZNF22P17026 224 aaPredicted RBP8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 SERP2Q8N6R1 65 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 C16orf95Q9H693 158 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 HHLA3Q9XRX5 114 aa8.52□□□□□ -1.05
NPC1L1-201ENST00000289547 Q8N6K4 173 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 HCFC1P51610 2035 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 LINC01548A6NM66 108 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 ARHGAP32A7KAX9 2087 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 TRBV12-3P01733 135 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 HIST2H2BDQ6DRA6 164 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 HRCT1Q6UXD1 115 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 WFDC9Q8NEX5 89 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 500.6 ms