RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 LY6LH3BQJ8 138 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 MRPS12O15235 138 aaKnown RBP11.83□□□□□ -0.52
USP43-201ENST00000285199 Q6ZSV7 163 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 TRIAP1O43715 76 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 HAMPP81172 84 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 PF4P02776 101 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 CCDC179H3BU77 68 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 ATP6V0E2Q8NHE4 81 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
USP43-201ENST00000285199 ADORA2A-AS1P86434 159 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 NOP10Q9NPE3 64 aaKnown RBP11.8□□□□□ -0.52
USP43-201ENST00000285199 SOCS3O14543 225 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 PIFOQ8TCI5 191 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 SIRPDQ9H106 197 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 CDKN2A-AS1Q9UH64 79 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 RNASE3P12724 160 aaKnown RBP11.8□□□□□ -0.52
USP43-201ENST00000285199 IGHV4-30-2A0A087WSY4 118 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 ATP5G1P05496 136 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 EDN2P20800 178 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 MRGPRG-AS1Q2M3A8 158 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 IGHG4P01861 327 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 XCL1P47992 114 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 PRO3102Q9H379 93 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 ODF3BA8MYP8 253 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 GATA3P23771 443 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 IGHV3-30P01768 117 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 IGHV3-30-5P0DP03 117 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 CLPSL1A2RUU4 121 aa11.78□□□□□ -0.52
USP43-201ENST00000285199 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
USP43-201ENST00000285199 CDSNQ15517 529 aa11.78□□□□□ -0.52
USP43-201ENST00000285199 TMEM243Q9BU79 118 aa11.78□□□□□ -0.52
USP43-201ENST00000285199 COL5A1P20908 1838 aaPredicted RBP11.78□□□□□ -0.52
USP43-201ENST00000285199 TSPEAR-AS2P59090 65 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 HERVK_113P63121 156 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 IGHV4OR15-8A0A075B7B6 117 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 A0A087WW49 117 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 ESM1Q9NQ30 184 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 KALRNO60229 2985 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 IGHV1-58A0A0C4DH39 117 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 EPG5Q9HCE0 2579 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 A0A1B0GX51 115 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 SRSF2Q01130 221 aaKnown RBP11.76□□□□□ -0.53
USP43-201ENST00000285199 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 REV3LO60673 3130 aa11.75□□□□□ -0.53
USP43-201ENST00000285199 IGLV10-54A0A075B6I4 117 aa11.75□□□□□ -0.53
USP43-201ENST00000285199 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
USP43-201ENST00000285199 ADGRG4Q8IZF6 3080 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 A0A0J9YX75 114 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 LECT2O14960 151 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 TRACP01848 142 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 LMO4P61968 165 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 VSIG2Q96IQ7 327 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 C14orf132Q9NPU4 83 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 ZMAT4Q9H898 229 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 MUC4Q99102 2169 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 TMEM223A0PJW6 202 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 M0QY20 66 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 LINC00467Q9BRT7 94 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 TMEM61Q8N0U2 210 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 SPANXA1Q9NS26 97 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 LINC01619G3V211 115 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 DAZ2Q13117 558 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 DAZ4Q86SG3 579 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 DAZ3Q9NR90 486 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 F8P00451 2351 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 SPTBN5Q9NRC6 3674 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 IGHV4-4A0A075B6R2 117 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 H3BT86 120 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 CRLF1O75462 422 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 TRAV13-2A0A0B4J235 113 aa11.71□□□□□ -0.54
USP43-201ENST00000285199 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.54
USP43-201ENST00000285199 IGHG2P01859 326 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 SLPIP03973 132 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 MIAQ16674 131 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 IGLV2-18A0A075B6J9 118 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
USP43-201ENST00000285199 UBE2D1P51668 147 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
USP43-201ENST00000285199 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 A0A0B4J2C4 111 aa11.69□□□□□ -0.54
USP43-201ENST00000285199 AKAP13Q12802 2813 aa11.69□□□□□ -0.54
USP43-201ENST00000285199 SS18Q15532 418 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 TACC2O95359 2948 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 UBL5Q9BZL1 73 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 IGIPA6NJ69 53 aa11.67□□□□□ -0.54
USP43-201ENST00000285199 NDUFA7O95182 113 aa11.67□□□□□ -0.54
USP43-201ENST00000285199 POM121L12Q8N7R1 296 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms