RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 PRR20DP86480 221 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 PRR20BP86481 221 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 PRR20AP86496 221 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 C11orf71Q6IPW1 123 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 DSCAMO60469 2012 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 IGLV2-18A0A075B6J9 118 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 IGKV1-6A0A0C4DH72 117 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 C3orf84H3BNL1 204 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 DEFB4AO15263 64 aa5.99□□□□□ -1.45
USP3-201ENST00000268049 ODF3BA8MYP8 253 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 EML6Q6ZMW3 1958 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 TCL1BO95988 128 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 TRBV12-3P01733 135 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 VSIG2Q96IQ7 327 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 NDUFB1O75438 58 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 TMEM14CQ9P0S9 112 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 E9PLD3 99 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 OXLD1Q5BKU9 147 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 PLA2G2EQ9NZK7 142 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 PKD1L2Q7Z442 2459 aa5.98□□□□□ -1.45
USP3-201ENST00000268049 TRAV23DV6A0A075B6W5 121 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 RBAKDNA6NC62 111 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 CLPSL2Q6UWE3 100 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 C15orf65H3BRN8 121 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 FXYD5Q96DB9 178 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 C1orf147Q96MC9 270 aaPredicted RBP5.97□□□□□ -1.45
USP3-201ENST00000268049 MAP6D1Q9H9H5 199 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 JMJD7-PLA2G4BH0Y9G9 81 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 LINC00694P0DN24 101 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 CLEC2BQ92478 149 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 RETNQ9HD89 108 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 DYNAPQ8N1N2 210 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 Q9H8V8 135 aa5.97□□□□□ -1.45
USP3-201ENST00000268049 SONP18583 2426 aaKnown RBP5.96□□□□□ -1.45
USP3-201ENST00000268049 XCL1P47992 114 aa5.96□□□□□ -1.45
USP3-201ENST00000268049 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.46
USP3-201ENST00000268049 TMEM61Q8N0U2 210 aa5.96□□□□□ -1.46
USP3-201ENST00000268049 FGF23Q9GZV9 251 aaPredicted RBP5.96□□□□□ -1.46
USP3-201ENST00000268049 Q8N7P7 452 aa5.96□□□□□ -1.46
USP3-201ENST00000268049 RANBP2P49792 3224 aaKnown RBP5.96□□□□□ -1.46
USP3-201ENST00000268049 PCNX3Q9H6A9 2034 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 TRAV4A0A0B4J268 109 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 FUSP35637 526 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP3-201ENST00000268049 FAM222AQ5U5X8 452 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 ESM1Q9NQ30 184 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 PRR14LQ5THK1 2151 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 TEX49A0A1B0GTD5 131 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
USP3-201ENST00000268049 DEFB114Q30KQ6 69 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 Q6ZSR3 168 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 HIVEP3Q5T1R4 2406 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 KRTAP10-9P60411 292 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 UBE2D3P61077 147 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 KLK12Q9UKR0 248 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 CHD7Q9P2D1 2997 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 A0A087WZ39 114 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 TIMM17BO60830 172 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 NREPQ16612 68 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 SDIM1Q6ZPB5 146 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 UPK3BQ9BT76 320 aa5.95□□□□□ -1.46
USP3-201ENST00000268049 PRRC2AP48634 2157 aaKnown RBP5.94□□□□□ -1.46
USP3-201ENST00000268049 DIAPH2-AS1Q14236 149 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 ZNF702PQ9H963 129 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 NDUFS5O43920 106 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 CTRLP40313 264 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 SERP2Q8N6R1 65 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 XGP55808 180 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 IMUPQ9GZP8 106 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 A0A0J9YWU9 116 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 COX7CP15954 63 aa5.94□□□□□ -1.46
USP3-201ENST00000268049 GATA1P15976 413 aaPredicted RBP5.94□□□□□ -1.46
USP3-201ENST00000268049 RNASE13Q5GAN3 156 aaKnown RBP5.94□□□□□ -1.46
USP3-201ENST00000268049 ZNF295-AS1Q8N0V1 137 aa5.93□□□□□ -1.46
USP3-201ENST00000268049 MUC7Q8TAX7 377 aa5.93□□□□□ -1.46
USP3-201ENST00000268049 TNRC6BQ9UPQ9 1833 aaKnown RBP5.93□□□□□ -1.46
USP3-201ENST00000268049 IGKV2-24A0A0C4DH68 120 aa5.93□□□□□ -1.46
USP3-201ENST00000268049 H3BQ85 93 aa5.93□□□□□ -1.46
USP3-201ENST00000268049 IGHV4-30-4P0DP06 118 aa5.93□□□□□ -1.46
USP3-201ENST00000268049 IGLV11-55A0A075B6I3 123 aa5.93□□□□□ -1.46
USP3-201ENST00000268049 COX7B2Q8TF08 81 aa5.93□□□□□ -1.46
USP3-201ENST00000268049 OPRPNQ99935 248 aaPredicted RBP5.92□□□□□ -1.46
USP3-201ENST00000268049 SND1-IT1Q9HBX3 110 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 SMIM26A0A096LP01 95 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 LECT2O14960 151 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 PROP1O75360 226 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 FRMD6-AS1P0C7T7 363 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 NCOA6Q14686 2063 aaPredicted RBP5.92□□□□□ -1.46
USP3-201ENST00000268049 PTPRBP23467 1997 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 NDUFC1O43677 76 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 IGHV4-28A0A0C4DH34 117 aa5.92□□□□□ -1.46
USP3-201ENST00000268049 CHD9Q3L8U1 2897 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
USP3-201ENST00000268049 CSDC2Q9Y534 153 aaKnown RBP5.91□□□□□ -1.46
USP3-201ENST00000268049 ARHGAP21Q5T5U3 1957 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms