RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 RHOHQ15669 191 aa6.55□□□□□ -1.36
VAPB-201ENST00000265619 FANCD2OSQ96PS1 177 aa6.55□□□□□ -1.36
VAPB-201ENST00000265619 I3L3M4 83 aa6.55□□□□□ -1.36
VAPB-201ENST00000265619 TMEM219Q86XT9 240 aa6.55□□□□□ -1.36
VAPB-201ENST00000265619 LITAFQ99732 161 aa6.55□□□□□ -1.36
VAPB-201ENST00000265619 BPESC1Q9GZL8 116 aa6.55□□□□□ -1.36
VAPB-201ENST00000265619 IGHV1-3A0A0C4DH29 117 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 TRAV12-3A0A0B4J271 114 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 CLPSL1A2RUU4 121 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 LINC00477Q96M19 166 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 SLC50A1Q9BRV3 221 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 CUBNO60494 3623 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 PRSS2P07478 247 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
VAPB-201ENST00000265619 IGHV4-4A0A075B6R2 117 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 TRBV7-1A0A0A6YYK4 115 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 IGHV1-8P0DP01 117 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 DAND5Q8N907 189 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 H3BT86 120 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 LST1O00453 97 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 CRYGAP11844 174 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 ZNF876PQ49A33 203 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 LINC00311Q8N616 119 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 C22orf24Q9Y442 160 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 STHQ8IWL8 128 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 CCL19Q99731 98 aa6.53□□□□□ -1.36
VAPB-201ENST00000265619 TRAV13-1A0A0B4J241 112 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 NDPQ00604 133 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 DCANP1Q8TF63 244 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 ZNF256Q9Y2P7 627 aaPredicted RBP6.52□□□□□ -1.37
VAPB-201ENST00000265619 GNRH2O43555 120 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 CTSGP08311 255 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 WNK1Q9H4A3 2382 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 IGKV3-7A0A075B6H7 116 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 A0A087WVE0 104 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 A0A0J9YXV3 536 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 RPS28P62857 69 aaKnown RBP6.52□□□□□ -1.37
VAPB-201ENST00000265619 PEMTQ9UBM1 199 aa6.52□□□□□ -1.37
VAPB-201ENST00000265619 ITPR2Q14571 2701 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 S100A4P26447 101 aaKnown RBP6.51□□□□□ -1.37
VAPB-201ENST00000265619 FBXL19-AS1Q494R0 122 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 TMEM30BQ3MIR4 351 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 C10orf105Q8TEF2 133 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 FLNAP21333 2647 aaKnown RBP6.51□□□□□ -1.37
VAPB-201ENST00000265619 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 LEPROTO15243 131 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 MALP21145 153 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 SORL1Q92673 2214 aa6.51□□□□□ -1.37
VAPB-201ENST00000265619 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.5□□□□□ -1.37
VAPB-201ENST00000265619 IGLV1-47P01700 117 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 ZFP36P26651 326 aaKnown RBP6.5□□□□□ -1.37
VAPB-201ENST00000265619 LINC00315P59091 139 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 BRD3OSQ6XYD6 125 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 UPK3BQ9BT76 320 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 DPH3P1Q9H4G8 78 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 A0A087WWL8 130 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 PYGO1Q9Y3Y4 419 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 JMJD1CQ15652 2540 aa6.5□□□□□ -1.37
VAPB-201ENST00000265619 HIST1H4AP62805 103 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 BUB1B-PAK6H3BSN5 160 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 NXPH4O95158 308 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 TRACP01848 142 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 RNASE13Q5GAN3 156 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 C9orf129Q5T035 196 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 TIMM21Q9BVV7 248 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 DAZ2Q13117 558 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 VMO1Q7Z5L0 202 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 DAZ4Q86SG3 579 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 ZNF843Q8N446 348 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 DAZ3Q9NR90 486 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 SPANXCQ9NY87 97 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 ITPR3Q14573 2671 aa6.49□□□□□ -1.37
VAPB-201ENST00000265619 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
VAPB-201ENST00000265619 C2CD3Q4AC94 2353 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 ZFAND3Q9H8U3 227 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 IGKV3D-7A0A0C4DH55 119 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 IGHV3-30-3P0DP02 117 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 POLR2KP53803 58 aaKnown RBP6.48□□□□□ -1.37
VAPB-201ENST00000265619 Q8N2B8 174 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 PHLDA3Q9Y5J5 127 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 M0R1W7 72 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 BUB3O43684 328 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
VAPB-201ENST00000265619 LY6EQ16553 131 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 LINC00336Q6ZUF6 198 aa6.48□□□□□ -1.37
VAPB-201ENST00000265619 F5H697 171 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 C8orf31Q8N9H6 132 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms