RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 HILS1P60008 231 aa14.22□□□□□ -0.13
PTPRE-201ENST00000254667 H3BT86 120 aa14.21□□□□□ -0.13
PTPRE-201ENST00000254667 UFSP1Q6NVU6 142 aa14.21□□□□□ -0.13
PTPRE-201ENST00000254667 LECT2O14960 151 aa14.21□□□□□ -0.13
PTPRE-201ENST00000254667 ZNF702PQ9H963 129 aa14.21□□□□□ -0.13
PTPRE-201ENST00000254667 MIAQ16674 131 aa14.21□□□□□ -0.14
PTPRE-201ENST00000254667 SPATA25Q9BR10 227 aa14.21□□□□□ -0.14
PTPRE-201ENST00000254667 REG3AQ06141 175 aa14.2□□□□□ -0.14
PTPRE-201ENST00000254667 CEMP1Q6PRD7 247 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-201ENST00000254667 TRBV10-2A0A0K0K1G8 114 aa14.2□□□□□ -0.14
PTPRE-201ENST00000254667 P0DMU3 169 aa14.2□□□□□ -0.14
PTPRE-201ENST00000254667 FAM231AP0DMU4 169 aa14.2□□□□□ -0.14
PTPRE-201ENST00000254667 FAM231CP0DMU5 169 aa14.2□□□□□ -0.14
PTPRE-201ENST00000254667 NREPQ16612 68 aa14.19□□□□□ -0.14
PTPRE-201ENST00000254667 GDF5OSQ5U4N7 250 aa14.19□□□□□ -0.14
PTPRE-201ENST00000254667 NFE4Q86UQ8 179 aa14.19□□□□□ -0.14
PTPRE-201ENST00000254667 DSCAMO60469 2012 aa14.19□□□□□ -0.14
PTPRE-201ENST00000254667 ATRXP46100 2492 aa14.18□□□□□ -0.14
PTPRE-201ENST00000254667 TNCP24821 2201 aa14.18□□□□□ -0.14
PTPRE-201ENST00000254667 TRBV6-4A0A1B0GX49 114 aa14.18□□□□□ -0.14
PTPRE-201ENST00000254667 LINC00269Q8N2A0 174 aa14.18□□□□□ -0.14
PTPRE-201ENST00000254667 TMEM256-PLSCR3K7ERE1 68 aa14.17□□□□□ -0.14
PTPRE-201ENST00000254667 PDE6GP18545 87 aa14.17□□□□□ -0.14
PTPRE-201ENST00000254667 TAX1BP3O14907 124 aa14.17□□□□□ -0.14
PTPRE-201ENST00000254667 NEXN-AS1Q8NBZ9 246 aa14.17□□□□□ -0.14
PTPRE-201ENST00000254667 CEP192Q8TEP8 1941 aa14.16□□□□□ -0.14
PTPRE-201ENST00000254667 LY6G6DO95868 133 aa14.16□□□□□ -0.14
PTPRE-201ENST00000254667 CFAP126Q5VTH2 177 aa14.16□□□□□ -0.14
PTPRE-201ENST00000254667 DEFB131BA0A096LNP1 70 aa14.16□□□□□ -0.14
PTPRE-201ENST00000254667 LINC00467Q9BRT7 94 aa14.16□□□□□ -0.14
PTPRE-201ENST00000254667 RS1O15537 224 aa14.16□□□□□ -0.14
PTPRE-201ENST00000254667 PTPN13Q12923 2485 aa14.15□□□□□ -0.14
PTPRE-201ENST00000254667 COX7BP24311 80 aa14.15□□□□□ -0.14
PTPRE-201ENST00000254667 A0A0J9YXY3 114 aa14.15□□□□□ -0.14
PTPRE-201ENST00000254667 RBM3P98179 157 aaKnown RBP14.14□□□□□ -0.15
PTPRE-201ENST00000254667 M0QY20 66 aa14.14□□□□□ -0.15
PTPRE-201ENST00000254667 CHCHD10Q8WYQ3 142 aaPredicted RBP14.14□□□□□ -0.15
PTPRE-201ENST00000254667 CRIP1P50238 77 aa14.14□□□□□ -0.15
PTPRE-201ENST00000254667 C10orf99Q6UWK7 81 aa14.14□□□□□ -0.15
PTPRE-201ENST00000254667 LINC01006Q8NI28 216 aa14.14□□□□□ -0.15
PTPRE-201ENST00000254667 PCNX3Q9H6A9 2034 aa14.14□□□□□ -0.15
PTPRE-201ENST00000254667 IGLV1-40P01703 118 aa14.14□□□□□ -0.15
PTPRE-201ENST00000254667 IGHV4-28A0A0C4DH34 117 aa14.13□□□□□ -0.15
PTPRE-201ENST00000254667 U3KQK5 164 aa14.13□□□□□ -0.15
PTPRE-201ENST00000254667 C4orf48Q5BLP8 95 aa14.13□□□□□ -0.15
PTPRE-201ENST00000254667 CLEC2BQ92478 149 aa14.12□□□□□ -0.15
PTPRE-201ENST00000254667 IGLV4-3A0A075B6K6 122 aa14.12□□□□□ -0.15
PTPRE-201ENST00000254667 B9D2Q9BPU9 175 aa14.12□□□□□ -0.15
PTPRE-201ENST00000254667 TRBV6-8A0A0A6YYG3 113 aa14.11□□□□□ -0.15
PTPRE-201ENST00000254667 HIGD2BQ4VC39 106 aa14.11□□□□□ -0.15
PTPRE-201ENST00000254667 TRBV6-5A0A0K0K1A5 114 aa14.11□□□□□ -0.15
PTPRE-201ENST00000254667 CRYGDP07320 174 aa14.11□□□□□ -0.15
PTPRE-201ENST00000254667 HIST2H2BDQ6DRA6 164 aa14.11□□□□□ -0.15
PTPRE-201ENST00000254667 WFDC2Q14508 124 aa14.11□□□□□ -0.15
PTPRE-201ENST00000254667 IGLV2-11P01706 119 aa14.1□□□□□ -0.15
PTPRE-201ENST00000254667 PIEZO1Q92508 2521 aa14.1□□□□□ -0.15
PTPRE-201ENST00000254667 MP68P56378 58 aa14.1□□□□□ -0.15
PTPRE-201ENST00000254667 CDKN2A-AS1Q9UH64 79 aa14.1□□□□□ -0.15
PTPRE-201ENST00000254667 NAV2Q8IVL1 2488 aa14.1□□□□□ -0.15
PTPRE-201ENST00000254667 ATOX1O00244 68 aa14.1□□□□□ -0.15
PTPRE-201ENST00000254667 ZNF22P17026 224 aaPredicted RBP14.09□□□□□ -0.15
PTPRE-201ENST00000254667 FOXI1Q12951 378 aa14.09□□□□□ -0.15
PTPRE-201ENST00000254667 SONP18583 2426 aaKnown RBP14.09□□□□□ -0.15
PTPRE-201ENST00000254667 TRBV27A0A0K0K1C4 114 aa14.09□□□□□ -0.15
PTPRE-201ENST00000254667 TMEM223A0PJW6 202 aa14.09□□□□□ -0.15
PTPRE-201ENST00000254667 RNF185Q96GF1 192 aa14.09□□□□□ -0.15
PTPRE-201ENST00000254667 PYGO1Q9Y3Y4 419 aa14.09□□□□□ -0.15
PTPRE-201ENST00000254667 IBA57-AS1B1ANH7 110 aa14.08□□□□□ -0.15
PTPRE-201ENST00000254667 LINC00482Q8N8I6 264 aa14.08□□□□□ -0.15
PTPRE-201ENST00000254667 WNK1Q9H4A3 2382 aa14.08□□□□□ -0.16
PTPRE-201ENST00000254667 A0A1B0GX51 115 aa14.08□□□□□ -0.16
PTPRE-201ENST00000254667 TMEM258P61165 79 aa14.08□□□□□ -0.16
PTPRE-201ENST00000254667 RNF183Q96D59 192 aa14.08□□□□□ -0.16
PTPRE-201ENST00000254667 NAV3Q8IVL0 2385 aa14.07□□□□□ -0.16
PTPRE-201ENST00000254667 KLLNB2CW77 178 aa14.07□□□□□ -0.16
PTPRE-201ENST00000254667 KIR2DL5BQ8NHK3 375 aa14.07□□□□□ -0.16
PTPRE-201ENST00000254667 IGKV3D-7A0A0C4DH55 119 aa14.06□□□□□ -0.16
PTPRE-201ENST00000254667 TRAV10A0A0B4J240 114 aa14.06□□□□□ -0.16
PTPRE-201ENST00000254667 SPANXB1Q9NS25 103 aaPredicted RBP14.05□□□□□ -0.16
PTPRE-201ENST00000254667 SMIM20Q8N5G0 67 aa14.05□□□□□ -0.16
PTPRE-201ENST00000254667 PRR14LQ5THK1 2151 aa14.05□□□□□ -0.16
PTPRE-201ENST00000254667 IGKV2-24A0A0C4DH68 120 aa14.05□□□□□ -0.16
PTPRE-201ENST00000254667 ARHGAP21Q5T5U3 1957 aa14.04□□□□□ -0.16
PTPRE-201ENST00000254667 PLA2G2AP14555 144 aa14.04□□□□□ -0.16
PTPRE-201ENST00000254667 LRP4O75096 1905 aa14.04□□□□□ -0.16
PTPRE-201ENST00000254667 CDSNQ15517 529 aa14.04□□□□□ -0.16
PTPRE-201ENST00000254667 TNRC6BQ9UPQ9 1833 aaKnown RBP14.03□□□□□ -0.16
PTPRE-201ENST00000254667 RNASE3P12724 160 aaKnown RBP14.03□□□□□ -0.16
PTPRE-201ENST00000254667 NDUFA7O95182 113 aa14.02□□□□□ -0.16
PTPRE-201ENST00000254667 PIK3CD-AS1Q5SR53 167 aa14.02□□□□□ -0.16
PTPRE-201ENST00000254667 FAM110AQ9BQ89 295 aa14.02□□□□□ -0.17
PTPRE-201ENST00000254667 DCANP1Q8TF63 244 aa14.01□□□□□ -0.17
PTPRE-201ENST00000254667 C9orf85Q96MD7 179 aa14.01□□□□□ -0.17
PTPRE-201ENST00000254667 NCOR2Q9Y618 2525 aa14.01□□□□□ -0.17
PTPRE-201ENST00000254667 TCL1BO95988 128 aa14□□□□□ -0.17
PTPRE-201ENST00000254667 LINC00308Q8TCZ7 52 aa14□□□□□ -0.17
PTPRE-201ENST00000254667 YPEL4Q96NS1 127 aa14□□□□□ -0.17
PTPRE-201ENST00000254667 BBC3Q96PG8 261 aaPredicted RBP14□□□□□ -0.17
PTPRE-201ENST00000254667 Q6ZS46 218 aa13.99□□□□□ -0.17
PTPRE-201ENST00000254667 FAM236AA0A1B0GUQ0 79 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms