RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 CRLF1O75462 422 aa13.68□□□□□ -0.22
CHPF-201ENST00000243776 TRBV7-9A0A0J9YWB2 115 aa13.67□□□□□ -0.22
CHPF-201ENST00000243776 ATP5J2P56134 94 aa13.67□□□□□ -0.22
CHPF-201ENST00000243776 SBSPONQ8IVN8 264 aa13.67□□□□□ -0.22
CHPF-201ENST00000243776 ANAPC13Q9BS18 74 aa13.67□□□□□ -0.22
CHPF-201ENST00000243776 NF1P21359 2839 aa13.67□□□□□ -0.22
CHPF-201ENST00000243776 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
CHPF-201ENST00000243776 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
CHPF-201ENST00000243776 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
CHPF-201ENST00000243776 TIMM21Q9BVV7 248 aa13.67□□□□□ -0.22
CHPF-201ENST00000243776 A0A0U1RRA0 63 aa13.66□□□□□ -0.22
CHPF-201ENST00000243776 TRIAP1O43715 76 aa13.66□□□□□ -0.22
CHPF-201ENST00000243776 NSUN5P1Q3KNT7 163 aa13.66□□□□□ -0.22
CHPF-201ENST00000243776 TEX15Q9BXT5 2789 aa13.66□□□□□ -0.22
CHPF-201ENST00000243776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.66□□□□□ -0.22
CHPF-201ENST00000243776 IGKV2-29A2NJV5 120 aaPredicted RBP13.66□□□□□ -0.22
CHPF-201ENST00000243776 DUX3Q96PT4 197 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 CCL19Q99731 98 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 TRAV4A0A0B4J268 109 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 UCNP55089 124 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 LINC01620Q4KN68 170 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 Q6ZSN1 163 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 TEX29Q8N6K0 151 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
CHPF-201ENST00000243776 LRRK2Q5S007 2527 aa13.64□□□□□ -0.23
CHPF-201ENST00000243776 H3BUA1 57 aa13.64□□□□□ -0.23
CHPF-201ENST00000243776 RHOHQ15669 191 aa13.64□□□□□ -0.23
CHPF-201ENST00000243776 ZFAND6Q6FIF0 208 aa13.64□□□□□ -0.23
CHPF-201ENST00000243776 DEFB136Q30KP8 78 aa13.64□□□□□ -0.23
CHPF-201ENST00000243776 M0R2P5 195 aa13.64□□□□□ -0.23
CHPF-201ENST00000243776 FAM104AQ969W3 186 aa13.64□□□□□ -0.23
CHPF-201ENST00000243776 C10orf105Q8TEF2 133 aa13.63□□□□□ -0.23
CHPF-201ENST00000243776 SS18L2Q9UHA2 77 aa13.63□□□□□ -0.23
CHPF-201ENST00000243776 K7EMT4 169 aa13.62□□□□□ -0.23
CHPF-201ENST00000243776 K7EQG2 157 aa13.62□□□□□ -0.23
CHPF-201ENST00000243776 NDUFA12Q9UI09 145 aa13.62□□□□□ -0.23
CHPF-201ENST00000243776 MSMBP08118 114 aa13.62□□□□□ -0.23
CHPF-201ENST00000243776 PSMB8P28062 276 aa13.62□□□□□ -0.23
CHPF-201ENST00000243776 CFHR3Q02985 330 aa13.62□□□□□ -0.23
CHPF-201ENST00000243776 DEFB112Q30KQ8 113 aa13.62□□□□□ -0.23
CHPF-201ENST00000243776 ZNF625Q96I27 306 aaPredicted RBP13.62□□□□□ -0.23
CHPF-201ENST00000243776 ATXN8Q156A1 80 aa13.61□□□□□ -0.23
CHPF-201ENST00000243776 TNFRSF18Q9Y5U5 241 aa13.61□□□□□ -0.23
CHPF-201ENST00000243776 A0A0B4J2C4 111 aa13.61□□□□□ -0.23
CHPF-201ENST00000243776 DOPEY1Q5JWR5 2465 aa13.61□□□□□ -0.23
CHPF-201ENST00000243776 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
CHPF-201ENST00000243776 LITAFQ99732 161 aa13.6□□□□□ -0.23
CHPF-201ENST00000243776 DEFB131AP59861 70 aa13.6□□□□□ -0.23
CHPF-201ENST00000243776 NAV2Q8IVL1 2488 aa13.6□□□□□ -0.23
CHPF-201ENST00000243776 SNCGO76070 127 aa13.59□□□□□ -0.23
CHPF-201ENST00000243776 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
CHPF-201ENST00000243776 B5MCH6 92 aa13.59□□□□□ -0.23
CHPF-201ENST00000243776 C2orf82Q6UX34 121 aa13.59□□□□□ -0.23
CHPF-201ENST00000243776 TMEM262E9PQX1 116 aa13.58□□□□□ -0.23
CHPF-201ENST00000243776 BRI3O95415 125 aa13.58□□□□□ -0.24
CHPF-201ENST00000243776 GAGE2BQ13066 116 aa13.58□□□□□ -0.24
CHPF-201ENST00000243776 GAGE2EQ4V326 116 aa13.58□□□□□ -0.24
CHPF-201ENST00000243776 GAGE2DQ9UEU5 116 aa13.58□□□□□ -0.24
CHPF-201ENST00000243776 IGSF10Q6WRI0 2623 aa13.58□□□□□ -0.24
CHPF-201ENST00000243776 HOXD3P31249 432 aaPredicted RBP13.57□□□□□ -0.24
CHPF-201ENST00000243776 TTC32Q5I0X7 151 aa13.57□□□□□ -0.24
CHPF-201ENST00000243776 ICOSQ9Y6W8 199 aa13.57□□□□□ -0.24
CHPF-201ENST00000243776 TRAV8-4A0A0B4J246 113 aa13.56□□□□□ -0.24
CHPF-201ENST00000243776 SLURP1P55000 103 aa13.56□□□□□ -0.24
CHPF-201ENST00000243776 LINC00467Q9BRT7 94 aa13.56□□□□□ -0.24
CHPF-201ENST00000243776 CITED1Q99966 193 aa13.56□□□□□ -0.24
CHPF-201ENST00000243776 AKAP9Q99996 3911 aa13.55□□□□□ -0.24
CHPF-201ENST00000243776 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
CHPF-201ENST00000243776 H7C423 109 aa13.55□□□□□ -0.24
CHPF-201ENST00000243776 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
CHPF-201ENST00000243776 C15orf53Q8NAA6 179 aa13.55□□□□□ -0.24
CHPF-201ENST00000243776 CCDC168Q8NDH2 2452 aa13.55□□□□□ -0.24
CHPF-201ENST00000243776 TRGV11A0A075B6L2 103 aa13.55□□□□□ -0.24
CHPF-201ENST00000243776 MRPS36P82909 103 aaKnown RBP13.54□□□□□ -0.24
CHPF-201ENST00000243776 CDKN2A-AS1Q9UH64 79 aa13.54□□□□□ -0.24
CHPF-201ENST00000243776 H3BMM0 161 aa13.54□□□□□ -0.24
CHPF-201ENST00000243776 UBE2WQ96B02 151 aa13.54□□□□□ -0.24
CHPF-201ENST00000243776 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
CHPF-201ENST00000243776 TRBV10-2A0A0K0K1G8 114 aa13.53□□□□□ -0.24
CHPF-201ENST00000243776 RBMY1BA6NDE4 496 aaKnown RBP13.53□□□□□ -0.24
CHPF-201ENST00000243776 RBMY1EA6NEQ0 496 aaKnown RBP13.53□□□□□ -0.24
CHPF-201ENST00000243776 NDUFA7O95182 113 aa13.53□□□□□ -0.24
CHPF-201ENST00000243776 RBMY1DP0C7P1 496 aaKnown RBP13.53□□□□□ -0.24
CHPF-201ENST00000243776 RPL13AP40429 203 aaKnown RBP13.53□□□□□ -0.24
CHPF-201ENST00000243776 VSIG2Q96IQ7 327 aa13.53□□□□□ -0.24
CHPF-201ENST00000243776 ODF3Q96PU9 254 aa13.53□□□□□ -0.24
CHPF-201ENST00000243776 PIEZO1Q92508 2521 aa13.53□□□□□ -0.24
CHPF-201ENST00000243776 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.53□□□□□ -0.24
CHPF-201ENST00000243776 TRBV30A0A0K0K1B3 111 aa13.52□□□□□ -0.24
CHPF-201ENST00000243776 CHCHD7Q9BUK0 85 aa13.52□□□□□ -0.24
CHPF-201ENST00000243776 KHDC1LQ5JSQ8 128 aa13.52□□□□□ -0.25
CHPF-201ENST00000243776 CCDC179H3BU77 68 aa13.51□□□□□ -0.25
CHPF-201ENST00000243776 LINC01587Q99440 93 aa13.51□□□□□ -0.25
CHPF-201ENST00000243776 UBE2D4Q9Y2X8 147 aa13.51□□□□□ -0.25
CHPF-201ENST00000243776 NDUFV3P56181 108 aaKnown RBP13.5□□□□□ -0.25
CHPF-201ENST00000243776 COX6A2Q02221 97 aa13.5□□□□□ -0.25
CHPF-201ENST00000243776 MIAQ16674 131 aa13.5□□□□□ -0.25
CHPF-201ENST00000243776 B4DSR2 109 aa13.49□□□□□ -0.25
CHPF-201ENST00000243776 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
CHPF-201ENST00000243776 COX6CP09669 75 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms