RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 TRAV26-1A0A087WT03 109 aa17.42■□□□□ 0.38
TARBP1-201ENST00000040877 JMJD7-PLA2G4BH0Y9G9 81 aa17.42■□□□□ 0.38
TARBP1-201ENST00000040877 DIRC1Q969H9 104 aa17.41■□□□□ 0.38
TARBP1-201ENST00000040877 UBE2AP49459 152 aa17.41■□□□□ 0.38
TARBP1-201ENST00000040877 FAM222AQ5U5X8 452 aa17.41■□□□□ 0.38
TARBP1-201ENST00000040877 MIR7-3HGQ8N6C7 128 aa17.41■□□□□ 0.38
TARBP1-201ENST00000040877 Q6ZUT4 128 aa17.4■□□□□ 0.38
TARBP1-201ENST00000040877 RBM3P98179 157 aaKnown RBP17.39■□□□□ 0.38
TARBP1-201ENST00000040877 MBD6Q96DN6 1003 aa17.39■□□□□ 0.37
TARBP1-201ENST00000040877 TP53TG3Q9ULZ0 132 aa17.39■□□□□ 0.37
TARBP1-201ENST00000040877 CEP192Q8TEP8 1941 aa17.39■□□□□ 0.37
TARBP1-201ENST00000040877 DAND5Q8N907 189 aa17.39■□□□□ 0.37
TARBP1-201ENST00000040877 PSMB8P28062 276 aa17.39■□□□□ 0.37
TARBP1-201ENST00000040877 NCOR2Q9Y618 2525 aa17.39■□□□□ 0.37
TARBP1-201ENST00000040877 MIFP14174 115 aa17.38■□□□□ 0.37
TARBP1-201ENST00000040877 NDUFB1O75438 58 aa17.38■□□□□ 0.37
TARBP1-201ENST00000040877 ZFAND2AQ8N6M9 145 aa17.38■□□□□ 0.37
TARBP1-201ENST00000040877 PCNX3Q9H6A9 2034 aa17.38■□□□□ 0.37
TARBP1-201ENST00000040877 HILS1P60008 231 aa17.38■□□□□ 0.37
TARBP1-201ENST00000040877 C20orf173Q96LM9 149 aa17.38■□□□□ 0.37
TARBP1-201ENST00000040877 SPATA25Q9BR10 227 aa17.37■□□□□ 0.37
TARBP1-201ENST00000040877 NCR3O14931 201 aa17.37■□□□□ 0.37
TARBP1-201ENST00000040877 UFSP1Q6NVU6 142 aa17.36■□□□□ 0.37
TARBP1-201ENST00000040877 MYO18BQ8IUG5 2567 aa17.36■□□□□ 0.37
TARBP1-201ENST00000040877 FAM236AA0A1B0GUQ0 79 aa17.36■□□□□ 0.37
TARBP1-201ENST00000040877 FAM236BA0A1B0GV22 79 aa17.36■□□□□ 0.37
TARBP1-201ENST00000040877 H3BT86 120 aa17.35■□□□□ 0.37
TARBP1-201ENST00000040877 ZNF702PQ9H963 129 aa17.35■□□□□ 0.37
TARBP1-201ENST00000040877 PRR14LQ5THK1 2151 aa17.35■□□□□ 0.37
TARBP1-201ENST00000040877 NDUFS5O43920 106 aa17.35■□□□□ 0.37
TARBP1-201ENST00000040877 TMEM258P61165 79 aa17.35■□□□□ 0.37
TARBP1-201ENST00000040877 REG3AQ06141 175 aa17.34■□□□□ 0.37
TARBP1-201ENST00000040877 A0A0B4J2C4 111 aa17.34■□□□□ 0.37
TARBP1-201ENST00000040877 LECT2O14960 151 aa17.34■□□□□ 0.37
TARBP1-201ENST00000040877 MIAQ16674 131 aa17.33■□□□□ 0.37
TARBP1-201ENST00000040877 CCDC168Q8NDH2 2452 aa17.33■□□□□ 0.36
TARBP1-201ENST00000040877 TRBV6-4A0A1B0GX49 114 aa17.33■□□□□ 0.36
TARBP1-201ENST00000040877 NREPQ16612 68 aa17.32■□□□□ 0.36
TARBP1-201ENST00000040877 PDE6GP18545 87 aa17.32■□□□□ 0.36
TARBP1-201ENST00000040877 ATOX1O00244 68 aa17.32■□□□□ 0.36
TARBP1-201ENST00000040877 TRBV10-2A0A0K0K1G8 114 aa17.31■□□□□ 0.36
TARBP1-201ENST00000040877 CEMP1Q6PRD7 247 aaPredicted RBP17.31■□□□□ 0.36
TARBP1-201ENST00000040877 P0DMU3 169 aa17.31■□□□□ 0.36
TARBP1-201ENST00000040877 FAM231AP0DMU4 169 aa17.31■□□□□ 0.36
TARBP1-201ENST00000040877 FAM231CP0DMU5 169 aa17.31■□□□□ 0.36
TARBP1-201ENST00000040877 LY6G6DO95868 133 aa17.31■□□□□ 0.36
TARBP1-201ENST00000040877 LINC00269Q8N2A0 174 aa17.31■□□□□ 0.36
TARBP1-201ENST00000040877 DEFB131BA0A096LNP1 70 aa17.3■□□□□ 0.36
TARBP1-201ENST00000040877 TMEM256-PLSCR3K7ERE1 68 aa17.3■□□□□ 0.36
TARBP1-201ENST00000040877 J3KT08 172 aa17.3■□□□□ 0.36
TARBP1-201ENST00000040877 GDF5OSQ5U4N7 250 aa17.3■□□□□ 0.36
TARBP1-201ENST00000040877 A0A1B0GX51 115 aa17.29■□□□□ 0.36
TARBP1-201ENST00000040877 NFE4Q86UQ8 179 aa17.29■□□□□ 0.36
TARBP1-201ENST00000040877 LINC01006Q8NI28 216 aa17.29■□□□□ 0.36
TARBP1-201ENST00000040877 PTH2Q96A98 100 aa17.29■□□□□ 0.36
TARBP1-201ENST00000040877 NEXN-AS1Q8NBZ9 246 aa17.29■□□□□ 0.36
TARBP1-201ENST00000040877 IGF2RP11717 2491 aa17.28■□□□□ 0.36
TARBP1-201ENST00000040877 CFAP126Q5VTH2 177 aa17.28■□□□□ 0.36
TARBP1-201ENST00000040877 HIVEP3Q5T1R4 2406 aa17.28■□□□□ 0.36
TARBP1-201ENST00000040877 IGLV1-40P01703 118 aa17.28■□□□□ 0.36
TARBP1-201ENST00000040877 COX7BP24311 80 aa17.27■□□□□ 0.36
TARBP1-201ENST00000040877 LINC00467Q9BRT7 94 aa17.27■□□□□ 0.36
TARBP1-201ENST00000040877 YPEL4Q96NS1 127 aa17.27■□□□□ 0.36
TARBP1-201ENST00000040877 M0QY20 66 aa17.27■□□□□ 0.35
TARBP1-201ENST00000040877 C4orf48Q5BLP8 95 aa17.27■□□□□ 0.35
TARBP1-201ENST00000040877 IGKV3D-7A0A0C4DH55 119 aa17.26■□□□□ 0.35
TARBP1-201ENST00000040877 CHCHD10Q8WYQ3 142 aaPredicted RBP17.26■□□□□ 0.35
TARBP1-201ENST00000040877 SORL1Q92673 2214 aa17.26■□□□□ 0.35
TARBP1-201ENST00000040877 A0A0J9YXY3 114 aa17.26■□□□□ 0.35
TARBP1-201ENST00000040877 ARHGAP21Q5T5U3 1957 aa17.26■□□□□ 0.35
TARBP1-201ENST00000040877 C10orf99Q6UWK7 81 aa17.26■□□□□ 0.35
TARBP1-201ENST00000040877 CRIP1P50238 77 aa17.25■□□□□ 0.35
TARBP1-201ENST00000040877 TRBV6-5A0A0K0K1A5 114 aa17.24■□□□□ 0.35
TARBP1-201ENST00000040877 TRBV6-8A0A0A6YYG3 113 aa17.24■□□□□ 0.35
TARBP1-201ENST00000040877 B9D2Q9BPU9 175 aa17.24■□□□□ 0.35
TARBP1-201ENST00000040877 RBX1P62877 108 aa17.24■□□□□ 0.35
TARBP1-201ENST00000040877 IGLV4-3A0A075B6K6 122 aa17.23■□□□□ 0.35
TARBP1-201ENST00000040877 CRYGDP07320 174 aa17.23■□□□□ 0.35
TARBP1-201ENST00000040877 U3KQK5 164 aa17.23■□□□□ 0.35
TARBP1-201ENST00000040877 HIST2H2BDQ6DRA6 164 aa17.23■□□□□ 0.35
TARBP1-201ENST00000040877 HIGD2BQ4VC39 106 aa17.23■□□□□ 0.35
TARBP1-201ENST00000040877 RNF183Q96D59 192 aa17.23■□□□□ 0.35
TARBP1-201ENST00000040877 IGHV4-28A0A0C4DH34 117 aa17.22■□□□□ 0.35
TARBP1-201ENST00000040877 KIR2DL5BQ8NHK3 375 aa17.22■□□□□ 0.35
TARBP1-201ENST00000040877 CDKN2A-AS1Q9UH64 79 aa17.21■□□□□ 0.35
TARBP1-201ENST00000040877 TRBV27A0A0K0K1C4 114 aa17.21■□□□□ 0.35
TARBP1-201ENST00000040877 PYGO1Q9Y3Y4 419 aa17.21■□□□□ 0.35
TARBP1-201ENST00000040877 LRP4O75096 1905 aa17.21■□□□□ 0.35
TARBP1-201ENST00000040877 IGLV2-11P01706 119 aa17.21■□□□□ 0.35
TARBP1-201ENST00000040877 MP68P56378 58 aa17.21■□□□□ 0.35
TARBP1-201ENST00000040877 CLEC2BQ92478 149 aa17.21■□□□□ 0.35
TARBP1-201ENST00000040877 IBA57-AS1B1ANH7 110 aa17.21■□□□□ 0.34
TARBP1-201ENST00000040877 TP73-AS1Q9UF72 201 aa17.2■□□□□ 0.34
TARBP1-201ENST00000040877 ZNF22P17026 224 aaPredicted RBP17.2■□□□□ 0.34
TARBP1-201ENST00000040877 KLLNB2CW77 178 aa17.19■□□□□ 0.34
TARBP1-201ENST00000040877 LINC00482Q8N8I6 264 aa17.19■□□□□ 0.34
TARBP1-201ENST00000040877 TRAV10A0A0B4J240 114 aa17.19■□□□□ 0.34
TARBP1-201ENST00000040877 TMEM223A0PJW6 202 aa17.18■□□□□ 0.34
TARBP1-201ENST00000040877 RNF185Q96GF1 192 aa17.18■□□□□ 0.34
TARBP1-201ENST00000040877 PLA2G2AP14555 144 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms