RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Ssbp2Q9CYZ8 361 aa5.68□□□□□ -1.5
Col6a6-201ENSMUST00000060896 AmtnQ9D3J8 213 aa5.68□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Nudt3Q9JI46 168 aa5.68□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ankhd1E9PUR0 2548 aaKnown RBP5.68□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gm20773A0A0A6YXW2 232 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gm20807A0A0A6YXX7 232 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gm20873J3QMQ9 232 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gm20795J3QP49 232 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Cd3eP22646 189 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gm21440Q3TTD8 232 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr1383Q7TQT2 311 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ifna12Q80SS5 189 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gng5Q80SZ7 68 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 RnasekQ8K3C0 98 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr1258Q8VGN6 311 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Fbxo25Q9D2Y6 357 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Cmtm2bQ9DAC0 210 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 SelenokQ9JLJ1 94 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Trbv12-2A0A0B4J1H1 124 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ceacam15A0A0B4J1L0 234 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Igkv19-93A0A0G2JFZ3 115 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Zfp930A0A1D5RM15 441 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Trdv4Q5R1A3 115 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Tmem167bQ80X45 74 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Dirc2Q8BFQ6 478 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Q8C3M9 231 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Poc1aQ8JZX3 405 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ndufs8Q8K3J1 212 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr1243Q8VGM7 305 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Mpv17lQ99MS3 194 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ccdc198Q9CPZ1 294 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 BC067074F6RXI4 2391 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ighv9-3A0A0B4J1J5 117 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ca11O70354 328 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 NgfP01139 241 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ins1P01325 108 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ssbp4Q3U4B1 363 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Sdr39u1Q5M8N4 308 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Znf474Q6V5K9 347 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Wdr83osQ6ZWX0 106 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr1246Q7TQZ6 314 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Zfp799Q8BHK4 648 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr1295Q8VF48 312 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 EpcamQ99JW5 315 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Cml1Q9JIZ0 222 aa5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Mbnl1Q9JKP5 341 aaKnown RBP5.67□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Trav6-1A0A075B5Z8 112 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ccdc71lE9Q4T4 218 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ascl5M0QWB7 188 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Efnb3O35393 340 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ptbp1P17225 527 aaKnown RBP5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Bst1Q64277 311 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Rnf24Q8BGI1 148 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr877Q8VF62 311 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr816Q8VFU2 312 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Rnf115Q9D0C1 305 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Rhebl1Q9D8T3 184 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Smdt1Q9DB10 107 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Dram1Q9DC58 238 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ube2l6Q9QZU9 153 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Trav9-1A0A075B601 112 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ear14F6YUX7 155 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Aqp7O54794 303 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Shisal1Q0VBP7 198 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Foxc2Q61850 494 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 C330021F23RikQ8C7T0 141 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ighv1-7A0A075B5T7 117 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Zfp980A2A9J5 645 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Cldn34c4A2ANA3 212 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 P01789 122 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Hoxa6P09092 232 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Myod1P10085 318 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Hist1h2bmP10854 126 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Loxl1P97873 607 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Rtl4Q3URY0 304 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Hist1h2bhQ64478 126 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Hist2h2bbQ64525 126 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Hist1h2bcQ6ZWY9 126 aaKnown RBP5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Cldn16Q925N4 235 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Pam16Q9CQV1 125 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Golt1bQ9CR60 138 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Supt4h1bQ9Z199 117 aa5.66□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Trbv31A0A075B5J5 111 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ighv14-2A0A075B5R7 117 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 H2al1jA2BFR3 109 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Inafm1E9PV59 130 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gm21732J3QM79 361 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Gm21921J3QNB5 361 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Rab24P35290 203 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Sfrp2P97299 295 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Tpsab1Q02844 273 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Znf260Q62513 407 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 EpopQ7TNS8 369 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Olfr263Q7TQT8 317 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Srsf7Q8BL97 267 aaKnown RBP5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 IqcjQ8BPW0 110 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Scnm1Q8K136 229 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Plrg1Q922V4 513 aaKnown RBP5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Anapc16Q9CPV2 110 aa5.65□□□□□ -1.5
Col6a6-201ENSMUST00000060896 Ndufa2Q9CQ75 99 aa5.65□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms