RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 P01812 117 aa9.46□□□□□ -0.89
Pcdhb17-201ENSMUST00000053856 Gm10192Q3V0S1 108 aa9.46□□□□□ -0.89
Pcdhb17-201ENSMUST00000053856 Duxbl2Q7TNE6 350 aa9.46□□□□□ -0.89
Pcdhb17-201ENSMUST00000053856 Sox21Q811W0 276 aa9.46□□□□□ -0.89
Pcdhb17-201ENSMUST00000053856 Tmem126aQ9D8Y1 196 aa9.46□□□□□ -0.89
Pcdhb17-201ENSMUST00000053856 St6galnac3Q9WUV2 305 aa9.46□□□□□ -0.89
Pcdhb17-201ENSMUST00000053856 Rabac1Q9Z0S9 185 aa9.46□□□□□ -0.89
Pcdhb17-201ENSMUST00000053856 Ralgapa1Q6GYP7 2035 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Tcrg-V6A0A075B5Y8 134 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Ighv3-4A0A0A6YXF1 117 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Adra2aQ01338 450 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Znf641Q8BZ34 422 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Spsb4Q8R5B6 273 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Olfr1441Q8VFV3 318 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Prr19B2RW88 366 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm5868Q8BJG1 145 aa9.46□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm12355A2A4X6 163 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Il2raP01590 268 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Srsf3P84104 164 aaKnown RBP9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Atp5iQ06185 71 aaKnown RBP9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Olfr148Q60887 310 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Olfr139Q60891 315 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Ceacam9Q78T27 234 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Atp5lQ9CPQ8 103 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Plxna3P70208 1872 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Rpl36-ps4A0A140T8U4 117 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm17430F6RSK3 157 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Lrcol1Q3URS3 161 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Pef1Q8BFY6 275 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Mrpl20Q9CQL4 149 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Bhlha15Q9QYC3 197 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 DdtO35215 118 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trav3-3Q5R1C3 114 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Morn2Q6UL01 79 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 BsxQ810B3 232 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Adamts9E9PUN6 1931 aa9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Sptbn1Q62261 2363 aaKnown RBP9.45□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Spata46Q4FZF2 204 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Rhno1Q8K3A4 235 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Ccl28Q9JIL2 130 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Rab37Q9JKM7 223 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 6430628N08RikA0A0U1RQ45 177 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Rnase9P60154 184 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 B020031M17RikQ3UT11 173 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trdv4Q5R1A3 115 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Defb6Q91VD6 63 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trav7-5A0A0G2JFX6 112 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Shisa6Q3UH99 525 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Foxs1Q61574 329 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Fmc1Q9CR13 113 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Susd2Q9DBX3 820 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trav6d-3A0A075B6B3 112 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Zfp433A0A0J9YUD4 600 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm32687A0A1W2P6H7 600 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 P04212 136 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Sox15P43267 231 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 AsipQ03288 131 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trav6-3Q5R1E6 112 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 LgalslbQ7TPX9 165 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Spry4Q9WTP2 300 aa9.44□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trav18A0A075B656 109 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trav6d-5A0A075B6B9 112 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm21900J3QP38 180 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Nkain3Q3URJ8 181 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm5615Q3UW02 101 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Timm21Q8CCM6 249 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Tmed6Q9CQG0 239 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Wbp2nlQ9D529 359 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Arid2E9Q7E2 1828 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trbv17A0A140T8P8 114 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm21913J3KML9 361 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm21776J3QPJ5 361 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Klf12O35738 402 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gstp2P46425 210 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Tac3P55099 116 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Tmem140Q8BGY5 185 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Trav6-1A0A075B5Z8 112 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Acrv1P50289 261 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 CenpvQ9CXS4 252 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Ndufb8Q9D6J5 186 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 EsdQ9R0P3 282 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Atg2bQ80XK6 2075 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Gm4791J3QQ14 102 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Hist1h2bmP10854 126 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Hist1h2bhQ64478 126 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Hist2h2bbQ64525 126 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Map1lc3aQ91VR7 121 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Rbmxl2Q9DAE2 385 aaKnown RBP9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Fbln5Q9WVH9 448 aa9.43□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Dock4P59764 1978 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Cnot1Q6ZQ08 2375 aaKnown RBP9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 PoleQ9WVF7 2283 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 AsmtD3KU66 387 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 CampP51437 172 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 1700001C19RikQ8K168 210 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 NmbQ9CR53 121 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Dnal4Q9DCM4 105 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Tcrg-C2A0A075B5Z2 167 aa9.42□□□□□ -0.9
Pcdhb17-201ENSMUST00000053856 Ighv1-18A0A0A6YXN4 117 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms