RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Trav3-3Q5R1C3 114 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm10190Q8BSD7 107 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cd226Q8K4F0 333 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ear10Q923L6 156 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tm4sf20Q9CQY8 226 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mrpl30Q9D7N6 160 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Smdt1Q9DB10 107 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lime1Q9EQR5 269 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Bet1lO35153 111 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 G6pcP35576 357 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr150Q60895 312 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 SlaQ60898 281 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cmc2Q8K199 79 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mpv17lQ99MS3 194 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Xlr5cQ9JJR2 179 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 AplnrQ9WV08 377 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Esp38A8R0X1 80 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Prss32E9Q409 334 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cst7O89098 144 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ren2P00796 401 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ifna4P07351 186 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Fgf2P15655 154 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Wnt2P21552 360 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hist1h1eP43274 219 aaKnown RBP5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Wnt10aP70701 417 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 ClcP97400 68 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tex30Q3TUU5 225 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Thap4Q6P3Z3 569 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tas2r114Q7M722 309 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Scrt2Q8BTH6 311 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 6030452D12RikQ8CD33 222 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q9CX63 252 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Try5Q9QUK9 246 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Try4Q9R0T7 246 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cbln1Q9R171 193 aa5.67□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr912A0A1L1SSS5 310 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm14597A2CFG5 200 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr1185-ps1F6XP16 303 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm5426J3QNM7 103 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 P01649 108 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Egr3P43300 387 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Pate4Q09098 99 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Scand1Q2M4I6 142 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lyplal1Q3UFF7 239 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cd33Q63994 403 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Samd10Q7TST3 202 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Nmes1Q810Q5 83 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mapk1ip1lQ8BH93 242 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr916Q8VG53 310 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Fam213bQ9DB60 201 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Srsf10Q9R0U0 262 aaKnown RBP5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr204E9Q8M0 305 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lin7cO88952 197 aaKnown RBP5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 CfdP03953 259 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 B4galt1P15535 399 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Klk1b22P15948 259 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gfra1P97785 468 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 KncnQ307W7 124 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q3TEI4 1023 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q6PIU9 354 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Onecut2Q6XBJ3 505 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 RetnlgQ8K426 117 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr1324Q8VEU7 332 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Spata45Q9CVW4 97 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hyls1Q9CXX0 307 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 4930583I09RikQ9D2E3 102 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Prss22Q9ER10 306 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Dolpp1Q9JMF7 238 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hoxa3P02831 443 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hoxa6P09092 232 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 LtaP09225 202 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 VhlP40338 181 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Spint3Q3UW09 88 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q497N7 227 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr411Q7TRW8 315 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tmem97Q8VD00 176 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Spata25Q9DA57 226 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr951Q9EQ94 314 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tpsg1Q9QUL7 311 aa5.66□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm8677K9J7G9 307 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Emp2O88662 172 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Prok1Q14A28 105 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ldlrad2Q3V0V0 142 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Znf664Q4VA44 261 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Sys1Q78S06 156 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hist3h2bbQ8CGP0 126 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr481Q8VGI5 312 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lipt2Q9D009 231 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hist3h2baQ9D2U9 126 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tex36Q9D5N9 219 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 CutcQ9D8X1 272 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Dram1Q9DC58 238 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Unc119Q9Z2R6 240 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Vmn1r138D3YTY2 306 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm8693E9PW18 306 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm4498K9J7G4 306 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Vmn1r118L7N273 306 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Pax9P47242 342 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tmem140Q8BGY5 185 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 MturnQ8CGA4 131 aa5.65□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 76.2 ms