Protein–RNA interactions for Protein: Q2M4I6

Scand1, SCAN domain-containing 1, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scand1Q2M4I6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Scand1Q2M4I6 Gm25239-201ENSMUST00000174915 86 ntBASIC29.16■■■□□ 2.26
Scand1Q2M4I6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Scand1Q2M4I6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Scand1Q2M4I6 Psd-208ENSMUST00000224556 2034 ntBASIC28.31■■■□□ 2.12
Scand1Q2M4I6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Scand1Q2M4I6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Scand1Q2M4I6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Scand1Q2M4I6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Scand1Q2M4I6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Scand1Q2M4I6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Scand1Q2M4I6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Scand1Q2M4I6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Scand1Q2M4I6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.68■■□□□ 1.86
Scand1Q2M4I6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Scand1Q2M4I6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Scand1Q2M4I6 Gm15042-201ENSMUST00000120212 883 ntBASIC26.5■■□□□ 1.83
Scand1Q2M4I6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Scand1Q2M4I6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scand1Q2M4I6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scand1Q2M4I6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scand1Q2M4I6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scand1Q2M4I6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Scand1Q2M4I6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Scand1Q2M4I6 Gm15045-201ENSMUST00000117359 883 ntBASIC26.07■■□□□ 1.76
Scand1Q2M4I6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Scand1Q2M4I6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Scand1Q2M4I6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.87■■□□□ 1.73
Scand1Q2M4I6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.83■■□□□ 1.73
Scand1Q2M4I6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Scand1Q2M4I6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.81■■□□□ 1.72
Scand1Q2M4I6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Scand1Q2M4I6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scand1Q2M4I6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scand1Q2M4I6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Scand1Q2M4I6 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.62■■□□□ 1.69
Scand1Q2M4I6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scand1Q2M4I6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Scand1Q2M4I6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.43■■□□□ 1.66
Scand1Q2M4I6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Scand1Q2M4I6 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.37■■□□□ 1.65
Scand1Q2M4I6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Scand1Q2M4I6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scand1Q2M4I6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.27■■□□□ 1.64
Scand1Q2M4I6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Scand1Q2M4I6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Scand1Q2M4I6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Scand1Q2M4I6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Scand1Q2M4I6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scand1Q2M4I6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scand1Q2M4I6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Scand1Q2M4I6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scand1Q2M4I6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Scand1Q2M4I6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Scand1Q2M4I6 Gm24109-201ENSMUST00000175489 103 ntBASIC24.83■■□□□ 1.57
Scand1Q2M4I6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scand1Q2M4I6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.74■■□□□ 1.55
Scand1Q2M4I6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scand1Q2M4I6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scand1Q2M4I6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scand1Q2M4I6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scand1Q2M4I6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Scand1Q2M4I6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scand1Q2M4I6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Scand1Q2M4I6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Scand1Q2M4I6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Scand1Q2M4I6 Gm23366-201ENSMUST00000175022 89 ntBASIC24.55■■□□□ 1.52
Scand1Q2M4I6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Scand1Q2M4I6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Scand1Q2M4I6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Scand1Q2M4I6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Scand1Q2M4I6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Scand1Q2M4I6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Scand1Q2M4I6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Scand1Q2M4I6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Scand1Q2M4I6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scand1Q2M4I6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Scand1Q2M4I6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.29■■□□□ 1.48
Scand1Q2M4I6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scand1Q2M4I6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Scand1Q2M4I6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scand1Q2M4I6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Scand1Q2M4I6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scand1Q2M4I6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scand1Q2M4I6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scand1Q2M4I6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
Scand1Q2M4I6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scand1Q2M4I6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.12■■□□□ 1.45
Scand1Q2M4I6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Scand1Q2M4I6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scand1Q2M4I6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24■■□□□ 1.43
Scand1Q2M4I6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Scand1Q2M4I6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Scand1Q2M4I6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scand1Q2M4I6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scand1Q2M4I6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scand1Q2M4I6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scand1Q2M4I6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Scand1Q2M4I6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scand1Q2M4I6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms