RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Dnd1Q6VY05 352 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 CrhQ8CIT0 187 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Ptrh2Q8R2Y8 181 aaKnown RBP13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Siglec12Q91Y57 467 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm44501A8R0T9 150 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm2381G3UY53 305 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 Mbnl2Q8C181 373 aaKnown RBP13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 MavsQ8VCF0 503 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 SelenokQ9JLJ1 94 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 CnmdQ9Z1F6 334 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 RhobP62746 196 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 Kcnip2Q9JJ69 270 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 Egr4Q9WUF2 478 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 NbeaQ9EPN1 2936 aa13.29□□□□□ -0.28
Trim28-201ENSMUST00000005705 Ighv1-26A0A075B5V0 117 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm3285A0A1W2P7U0 201 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 A930017K11RikE0CXQ2 571 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Oprk1P33534 380 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Pafah1b2Q61206 229 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Pygo2Q80V76 405 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Rhbdd1Q8BHC7 315 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Slc36a4Q8CH36 500 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Habp2Q8K0D2 558 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Vmn1r50Q9EP51 310 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 St6galnac6Q9JM95 333 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Trav12d-3A0A075B6A4 115 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm12886B1AZM5 119 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Degs1O09005 323 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Smim15Q3UTD9 74 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Mbnl1Q9JKP5 341 aaKnown RBP13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm6665F6Y363 85 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Ssty1P13675 232 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Ypel3P61237 119 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Tas2r114Q7M722 309 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Rnd1Q8BLR7 232 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Immp2lQ8BPT6 175 aa13.28□□□□□ -0.28
Trim28-201ENSMUST00000005705 Trav8n-2A0A075B633 112 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Trav16A0A075B653 116 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Trav17A0A075B655 113 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm37388A0A0A6YY46 143 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Zfp930A0A1D5RM15 441 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm14124A2AU83 715 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr898L7N1Z5 316 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Hoxa1P09022 331 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 ApcsP12246 224 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Pilrb2Q2YFS1 225 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 RnasekQ8K3C0 98 aa13.27□□□□□ -0.28
Trim28-201ENSMUST00000005705 Cldn1O88551 211 aa13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ren2P00796 401 aa13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ccl2P10148 148 aa13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 B020031M17RikQ3UT11 173 aa13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr153Q7TR48 307 aa13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 Fam168aQ8BGZ2 244 aa13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 Timm21Q8CCM6 249 aa13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 ChtopQ9CY57 249 aaKnown RBP13.27□□□□□ -0.29
Trim28-201ENSMUST00000005705 Trbv13-3A0A0B4J1H2 113 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Zfp420Q7TMN8 578 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr91Q7TRL3 312 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr492Q8VFD1 314 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 EpcamQ99JW5 315 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Psg18B2RSG7 476 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Cd3eP22646 189 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ypel2Q65Z95 119 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1178Q7TR20 323 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Q9CQM1 111 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Nhp2Q9CRB2 153 aaKnown RBP13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Tmem225Q9D9S2 230 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gab2Q9Z1S8 665 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Cspg4Q8VHY0 2327 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ighv7-3A0A075B5R2 120 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 1810011H11RikE9PVZ2 95 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ascl2O35885 263 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 Evi2aP20934 223 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 G6pc2Q9Z186 355 aa13.26□□□□□ -0.29
Trim28-201ENSMUST00000005705 MgpP19788 104 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 Wnt2P21552 360 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gcm1P70348 436 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 Wfdc21Q8BTE6 63 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm4894Q8CA09 118 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 NbasE9Q411 2356 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 PigyP0C1P0 71 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 HrkP62816 92 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 COA4Q8BT51 87 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ctnnbip1Q9JJN6 81 aa13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 Chd8Q09XV5 2582 aaKnown RBP13.25□□□□□ -0.29
Trim28-201ENSMUST00000005705 C2cd4aE9Q861 334 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Tm4sf19E9Q9H8 206 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Igll1P20764 209 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 A230072I06RikQ3UUJ8 172 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Slc17a2Q5SZA1 478 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1383Q7TQT2 311 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Mrps36Q9CQX8 102 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Mapk1ip1Q9D7G9 263 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1179A2AUS6 307 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm5741B2RVA4 72 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm27021M0QWE2 156 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Mtnd6P03925 172 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 P18530 117 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 SelenotP62342 195 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Usf1Q61069 310 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms