RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	TRAV12-2	A0A075B6T6	113 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	UBE2L5P	A0A1B0GUS4	154 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	IGLC2	P0DOY2	106 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	CCL18	P55774	89 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	FXYD5	Q96DB9	178 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	PYGO2	Q9BRQ0	406 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	MARVELD1	Q9BSK0	173 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	GNB1L	Q9BYB4	327 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	WFDC1	Q9HC57	220 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	SLC39A9	Q9NUM3	307 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	TMEM14C	Q9P0S9	112 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	RBM12B-AS1	Q9P1G2	102 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	HSPB11	Q9Y547	144 aa		4.29	□□□□□ -1.72
CASC19-238	ENST00000641523	FAM24A	A6NFZ4	105 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	KRTAP16-1	A8MUX0	517 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	PSPHP1	O15172	72 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	HTN1	P15515	57 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	H2BFS	P57053	126 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	PRR4	Q16378	134 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	C1orf134	Q5TEV5	83 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523		Q6ZR54	194 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	LINC00337	Q8N6G1	96 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	RXFP4	Q8TDU9	374 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	GFRA4	Q9GZZ7	299 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	TIMM9	Q9Y5J7	89 aa		4.28	□□□□□ -1.72
CASC19-238	ENST00000641523	TRBV19	A0A075B6N1	114 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	PLAC8L1	A1L4L8	177 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	C17orf112	F2Z3M2	114 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523		H3BNG1	76 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523		M0R2N4	97 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	SLC17A3	O00476	420 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	SLC25A5	P05141	298 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	NMB	P08949	121 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	FGF7	P21781	194 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	IL15RA	Q13261	267 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	MIC13	Q5XKP0	118 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	MRPL32	Q9BYC8	188 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	RNASE7	Q9H1E1	156 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	C11orf1	Q9H5F2	150 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	NOP10	Q9NPE3	64 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	DNAH11	Q96DT5	4516 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	PCLO	Q9Y6V0	5065 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	IGLV2-18	A0A075B6J9	118 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	FAM236D	A0A1B0GTK5	79 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	IGSF23	A1L1A6	192 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	C7orf71	A4D174	169 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523		H3BQ15	152 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	RTL8C	O15255	209 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	PDE6D	O43924	150 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	PFN1	P07737	140 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	CHTF8	P0CG12	524 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	FAM236C	P0DP71	79 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	AZU1	P20160	251 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	RYR1	P21817	5038 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	MT3	P25713	68 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	DEFA1	P59665	94 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	DEFA3	P59666	94 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	DAZ2	Q13117	558 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	JOSD1	Q15040	202 aa	Predicted RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	CENPW	Q5EE01	88 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	TMEM78	Q5T7P6	136 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	LINC00467	Q9BRT7	94 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	NPCDR1	Q9BY65	106 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	NMES1	Q9C002	83 aa		4.27	□□□□□ -1.73
CASC19-238	ENST00000641523	FAT2	Q9NYQ8	4349 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	NBDY	A0A0U1RRE5	68 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523		A0A1B0GVY2	172 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	LINC00587	B1AMM8	73 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	OR10J4	P0C629	311 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	CRISP2	P16562	243 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	CSN1S1	P47710	185 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	RAB2A	P61019	212 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	FCN2	Q15485	313 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	LINC00612	Q8N6U2	182 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	OR5C1	Q8NGR4	320 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	BORCS7	Q96B45	105 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	C18orf15	Q96N68	181 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	TMEM243	Q9BU79	118 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523		Q9H3A6	140 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	ZNF586	Q9NXT0	402 aa		4.26	□□□□□ -1.73
CASC19-238	ENST00000641523	DNAH2	Q9P225	4427 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	TRGV2	A0A075B6R0	118 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	TRAV8-3	A0A0A6YYJ7	113 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	TRAV5	A0A0B4J249	113 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	TRAV12-3	A0A0B4J271	114 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	KLLN	B2CW77	178 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	TAS2R45	P59539	299 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	IBA57	Q5T440	356 aa	Known RBP	4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	SCGB1D4	Q6XE38	83 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	PRNT	Q86SH4	94 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	LYPD1	Q8N2G4	141 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	FUT9	Q9Y231	359 aa		4.25	□□□□□ -1.73
CASC19-238	ENST00000641523	DNAH17	Q9UFH2	4485 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	MUC4	Q99102	2169 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	IGHV6-1	A0A0B4J1U7	121 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	LOC389332	A0A1B0GUA5	103 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	RBAKDN	A6NC62	111 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	PGP	A6NDG6	321 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	INMT-MINDY4	F8WBC2	141 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms