RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 P01737 135 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 KPRPQ5T749 579 aaPredicted RBP5.78□□□□□ -1.48
SCARB2-220ENST00000640076 Q6AWC8 147 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 ZFAND6Q6FIF0 208 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 RPS10P5Q9NQ39 176 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 ERG28Q9UKR5 140 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 V9GYV3 84 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 NBEAL2Q6ZNJ1 2754 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 TRAV12-3A0A0B4J271 114 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 TRAV21A0A0B4J279 112 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 SMKR1H3BMG3 65 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 H7BYZ3 331 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 CCL25O15444 150 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 ZNF324O75467 553 aaPredicted RBP5.77□□□□□ -1.49
SCARB2-220ENST00000640076 AMBPP02760 352 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 GIG44P09565 113 aaPredicted RBP5.77□□□□□ -1.49
SCARB2-220ENST00000640076 AZU1P20160 251 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 XCL2Q9UBD3 114 aa5.77□□□□□ -1.49
SCARB2-220ENST00000640076 ZNF705GA8MUZ8 300 aaPredicted RBP5.76□□□□□ -1.49
SCARB2-220ENST00000640076 RBMY1A1P0DJD3 496 aaKnown RBP5.76□□□□□ -1.49
SCARB2-220ENST00000640076 RBMY1CP0DJD4 496 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 EMP1P54849 157 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 RAB5BP61020 215 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 RBMY1FQ15415 496 aaKnown RBP5.76□□□□□ -1.49
SCARB2-220ENST00000640076 MORN3Q6PF18 240 aaPredicted RBP5.76□□□□□ -1.49
SCARB2-220ENST00000640076 SNHG12Q9BXW3 62 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 RPP21Q9H633 154 aaKnown RBP5.76□□□□□ -1.49
SCARB2-220ENST00000640076 TUBA4BQ9H853 241 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 TMEM242Q9NWH2 141 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 LOC102724200A0A096LPH7 203 aaPredicted RBP5.76□□□□□ -1.49
SCARB2-220ENST00000640076 IGKV3D-20A0A0C4DH25 116 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 INSP01308 110 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
SCARB2-220ENST00000640076 MUC21Q5SSG8 566 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 C1QTNF4Q9BXJ3 329 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 SPANXCQ9NY87 97 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 TMSB15BA0A087X1C1 80 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 IGLV5-39A0A0G2JS06 123 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 A8MWL6 223 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 GZMBP10144 247 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 RAB5AP20339 215 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 HNRNPA3P51991 378 aaKnown RBP5.75□□□□□ -1.49
SCARB2-220ENST00000640076 RPL18AQ02543 176 aaKnown RBP5.75□□□□□ -1.49
SCARB2-220ENST00000640076 TDRG1Q3Y452 100 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 C1orf158Q8N1D5 194 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 CSNK1G2-AS1Q8NCQ2 148 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 TSKUQ8WUA8 353 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 LAMTOR2Q9Y2Q5 125 aa5.75□□□□□ -1.49
SCARB2-220ENST00000640076 IGHV1OR15-1A0A075B7D0 117 aa5.74□□□□□ -1.49
SCARB2-220ENST00000640076 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
SCARB2-220ENST00000640076 APOC4P55056 127 aa5.74□□□□□ -1.49
SCARB2-220ENST00000640076 MRPL55Q7Z7F7 128 aaKnown RBP5.74□□□□□ -1.49
SCARB2-220ENST00000640076 GTSF1Q8WW33 167 aa5.74□□□□□ -1.49
SCARB2-220ENST00000640076 SMCO4Q9NRQ5 59 aa5.74□□□□□ -1.49
SCARB2-220ENST00000640076 IL36BQ9NZH7 164 aa5.74□□□□□ -1.49
SCARB2-220ENST00000640076 FAM236DA0A1B0GTK5 79 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 SMIM27A0A1W2PRY6 76 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 GRIFINA4D1Z8 144 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 J3KT08 172 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 TSHBP01222 138 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 CXCL1P09341 107 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 FAM236CP0DP71 79 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 TMEM256Q8N2U0 113 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 KCNS1Q96KK3 526 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 IMMP2LQ96T52 175 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 PYGO2Q9BRQ0 406 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 GFRA4Q9GZZ7 299 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 HIGD1CA8MV81 97 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 K7EIL1 84 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 GNRH2O43555 120 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 FOXA3P55318 350 aaPredicted RBP5.73□□□□□ -1.49
SCARB2-220ENST00000640076 ZNF705AQ6ZN79 300 aaPredicted RBP5.73□□□□□ -1.49
SCARB2-220ENST00000640076 BORCS7Q96B45 105 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 LINC01587Q99440 93 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 LINC00467Q9BRT7 94 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 MRPL16Q9NX20 251 aaKnown RBP5.73□□□□□ -1.49
SCARB2-220ENST00000640076 TP53TG3Q9ULZ0 132 aa5.73□□□□□ -1.49
SCARB2-220ENST00000640076 IGHV3OR16-12A0A075B7B8 117 aa5.72□□□□□ -1.49
SCARB2-220ENST00000640076 PRM2P04554 102 aa5.72□□□□□ -1.49
SCARB2-220ENST00000640076 IGLC6P0CF74 106 aa5.72□□□□□ -1.49
SCARB2-220ENST00000640076 HTN1P15515 57 aa5.72□□□□□ -1.49
SCARB2-220ENST00000640076 RPS28P62857 69 aaKnown RBP5.72□□□□□ -1.49
SCARB2-220ENST00000640076 NEGR1Q7Z3B1 354 aa5.72□□□□□ -1.49
SCARB2-220ENST00000640076 YPEL4Q96NS1 127 aa5.72□□□□□ -1.49
SCARB2-220ENST00000640076 MUC4Q99102 2169 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 IGHV3-16A0A0C4DH30 117 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 RNASE3P12724 160 aaKnown RBP5.71□□□□□ -1.49
SCARB2-220ENST00000640076 ASIPP42127 132 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 ELOBQ15370 118 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 DEFB135Q30KP9 77 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 FER1L6-AS1Q8NA97 138 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 NUP35Q8NFH5 326 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 NAT8BQ9UHF3 227 aa5.71□□□□□ -1.49
SCARB2-220ENST00000640076 A0A1B0GX51 115 aa5.71□□□□□ -1.5
SCARB2-220ENST00000640076 H3BVH4 76 aa5.71□□□□□ -1.5
SCARB2-220ENST00000640076 S100A4P26447 101 aaKnown RBP5.71□□□□□ -1.5
SCARB2-220ENST00000640076 CTRLP40313 264 aa5.71□□□□□ -1.5
SCARB2-220ENST00000640076 LINC00242Q5T6M2 205 aa5.71□□□□□ -1.5
SCARB2-220ENST00000640076 PGLYRP4Q96LB8 373 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms