RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV3-33P01772 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 ITLN1Q8WWA0 313 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 ITLN2Q8WWU7 325 aaPredicted RBP3.23□□□□□ -1.89
SCN3A-209ENST00000639244 LEAP2Q969E1 77 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1D-43A0A0B4J1Z2 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV40A0A0B4J280 105 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 RETNLBQ9BQ08 111 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 PRB3Q04118 309 aaPredicted RBP3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TNP2Q05952 138 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV23DV6A0A075B6W5 121 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 FAM223BA6NKX1 122 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 VMO1Q7Z5L0 202 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 C11orf72Q8NBR9 251 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 NDUFA12Q9UI09 145 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1D-17A0A075B6S4 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TRBV5-4A0A0C4DH59 114 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV3OR2-268A0A0C4DH90 116 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 DEFB123Q8N688 67 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 FN1P02751 2386 aaKnown RBP3.23□□□□□ -1.89
SCN3A-209ENST00000639244 PTPN13Q12923 2485 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1-9A0A0C4DH69 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 CHKB-CPT1BH3BT56 60 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 MSMPQ1L6U9 139 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 LIMD2Q9BT23 127 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV6-1A0A0B4J1U7 121 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV4-31P0DP07 118 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 CASC2Q6XLA1 102 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 LINC01465Q8N7H1 131 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 SOCS3O14543 225 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 GDF5OSQ5U4N7 250 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 DEFB104AQ8WTQ1 72 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TTTY13Q9BZ97 58 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TRBV10-3A0A0K0K1G6 114 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 Q0VFX4 171 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 RNASE6Q93091 150 aaKnown RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 UBE2D4Q9Y2X8 147 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 LHFPL6Q9Y693 200 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 S4R3C0 116 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV12-3A0A0B4J271 114 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 WISP2O76076 250 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 FXYD7P58549 80 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TFF3Q07654 80 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 MAP6D1Q9H9H5 199 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 SETD2Q9BYW2 2564 aaPredicted RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 E7EQL1 145 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 MUC6Q6W4X9 2439 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 ADARB2-AS1A8MUL3 147 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 C16orf97H3BN30 126 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 HCP5Q6MZN7 132 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 URB1-AS1Q96HZ7 61 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 PKD1L2Q7Z442 2459 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 C5orf67F2Z3F1 127 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV4-34P06331 123 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 LYPD6Q86Y78 171 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 MAPKAPK5-AS1Q8N8E1 139 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-66A0A0C4DH42 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 EPOPA6NHQ4 379 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-30P01768 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-30-5P0DP03 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 C8orf49Q96NF6 230 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3OR16-13A0A075B7E8 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3OR16-8A0A075B7F1 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-74A0A0B4J1X5 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 SPTY2D1-AS1A0A0U1RR47 76 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 ERC2-IT1O76042 136 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 DEFB124Q8NES8 71 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 CCL3P10147 92 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 CCL4P13236 92 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 KIAA0087Q14695 138 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 Q6ZR03 302 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 COL4A1P02462 1669 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 ANKHD1Q8IWZ3 2542 aaKnown RBP3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3OR16-10A0A075B7F0 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 PATE3B3GLJ2 98 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV3-20P01619 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 BSPH1Q075Z2 132 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 SNURFQ9Y675 71 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 LINC01548A6NM66 108 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 RNASE4P34096 147 aaKnown RBP3.2□□□□□ -1.9
SCN3A-209ENST00000639244 C10orf113Q5VZT2 155 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 FOXL2NBQ6ZUU3 175 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 SDHAF1A6NFY7 115 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 LEPROTO15243 131 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 FSTL3O95633 263 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 Q75L30 129 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 GPHB5Q86YW7 130 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 PROK2Q9HC23 129 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-49A0A0A0MS15 119 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 J3QL48 77 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 ZFYVE26Q68DK2 2539 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 C3orf84H3BNL1 204 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms