RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV3-33P01772 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 ITLN1Q8WWA0 313 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 ITLN2Q8WWU7 325 aaPredicted RBP3.23□□□□□ -1.89
SCN3A-209ENST00000639244 LEAP2Q969E1 77 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1D-43A0A0B4J1Z2 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV40A0A0B4J280 105 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 RETNLBQ9BQ08 111 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 PRB3Q04118 309 aaPredicted RBP3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TNP2Q05952 138 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV23DV6A0A075B6W5 121 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 FAM223BA6NKX1 122 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 VMO1Q7Z5L0 202 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 C11orf72Q8NBR9 251 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 NDUFA12Q9UI09 145 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1D-17A0A075B6S4 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 TRBV5-4A0A0C4DH59 114 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV3OR2-268A0A0C4DH90 116 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 DEFB123Q8N688 67 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 FN1P02751 2386 aaKnown RBP3.23□□□□□ -1.89
SCN3A-209ENST00000639244 PTPN13Q12923 2485 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1-9A0A0C4DH69 117 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 CHKB-CPT1BH3BT56 60 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 MSMPQ1L6U9 139 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 LIMD2Q9BT23 127 aa3.23□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV6-1A0A0B4J1U7 121 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV4-31P0DP07 118 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 CASC2Q6XLA1 102 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 LINC01465Q8N7H1 131 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 SOCS3O14543 225 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 GDF5OSQ5U4N7 250 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 DEFB104AQ8WTQ1 72 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TTTY13Q9BZ97 58 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TRBV10-3A0A0K0K1G6 114 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 Q0VFX4 171 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 RNASE6Q93091 150 aaKnown RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 UBE2D4Q9Y2X8 147 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 LHFPL6Q9Y693 200 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 S4R3C0 116 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TRAV12-3A0A0B4J271 114 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 WISP2O76076 250 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 FXYD7P58549 80 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 TFF3Q07654 80 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 MAP6D1Q9H9H5 199 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 SETD2Q9BYW2 2564 aaPredicted RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.22□□□□□ -1.89
SCN3A-209ENST00000639244 E7EQL1 145 aa3.22□□□□□ -1.89
SCN3A-209ENST00000639244 MUC6Q6W4X9 2439 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 ADARB2-AS1A8MUL3 147 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 C16orf97H3BN30 126 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 HCP5Q6MZN7 132 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 URB1-AS1Q96HZ7 61 aa3.21□□□□□ -1.89
SCN3A-209ENST00000639244 PKD1L2Q7Z442 2459 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 C5orf67F2Z3F1 127 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV4-34P06331 123 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 LYPD6Q86Y78 171 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 MAPKAPK5-AS1Q8N8E1 139 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-66A0A0C4DH42 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 EPOPA6NHQ4 379 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-30P01768 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-30-5P0DP03 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 C8orf49Q96NF6 230 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3OR16-13A0A075B7E8 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3OR16-8A0A075B7F1 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-74A0A0B4J1X5 117 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 SPTY2D1-AS1A0A0U1RR47 76 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 ERC2-IT1O76042 136 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 DEFB124Q8NES8 71 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 CCL3P10147 92 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 CCL4P13236 92 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 KIAA0087Q14695 138 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 Q6ZR03 302 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 COL4A1P02462 1669 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 ANKHD1Q8IWZ3 2542 aaKnown RBP3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3OR16-10A0A075B7F0 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 PATE3B3GLJ2 98 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV3-20P01619 116 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 BSPH1Q075Z2 132 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 SNURFQ9Y675 71 aa3.21□□□□□ -1.9
SCN3A-209ENST00000639244 LINC01548A6NM66 108 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 RNASE4P34096 147 aaKnown RBP3.2□□□□□ -1.9
SCN3A-209ENST00000639244 C10orf113Q5VZT2 155 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 FOXL2NBQ6ZUU3 175 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 SDHAF1A6NFY7 115 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 LEPROTO15243 131 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 FSTL3O95633 263 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 Q75L30 129 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 GPHB5Q86YW7 130 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 PROK2Q9HC23 129 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-49A0A0A0MS15 119 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 J3QL48 77 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 ZFYVE26Q68DK2 2539 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 C3orf84H3BNL1 204 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms