RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 TNFP01375 233 aa0.55□□□□□ -2.32
GYPB-216ENST00000638448 Q8N8P6 123 aa0.55□□□□□ -2.32
GYPB-216ENST00000638448 SMIM11BQ8TCY0 68 aa0.55□□□□□ -2.32
GYPB-216ENST00000638448 PPP3R2Q96LZ3 170 aa0.55□□□□□ -2.32
GYPB-216ENST00000638448 WFDC6Q9BQY6 131 aa0.55□□□□□ -2.32
GYPB-216ENST00000638448 SMG6Q86US8 1419 aaKnown RBP0.55□□□□□ -2.32
GYPB-216ENST00000638448 NCOA3Q9Y6Q9 1424 aa0.55□□□□□ -2.32
GYPB-216ENST00000638448 MYH13Q9UKX3 1938 aa0.54□□□□□ -2.32
GYPB-216ENST00000638448 LOC100130705A0A1B0GUX0 176 aa0.54□□□□□ -2.32
GYPB-216ENST00000638448 APOC2P02655 101 aa0.54□□□□□ -2.32
GYPB-216ENST00000638448 AKAIN1P0CW23 69 aa0.54□□□□□ -2.32
GYPB-216ENST00000638448 SPTSSBQ8NFR3 76 aa0.54□□□□□ -2.32
GYPB-216ENST00000638448 AFDNP55196 1824 aaKnown RBP0.54□□□□□ -2.32
GYPB-216ENST00000638448 APCP25054 2843 aa0.54□□□□□ -2.32
GYPB-216ENST00000638448 JMJD1CQ15652 2540 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 TRAV13-2A0A0B4J235 113 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 A0A1B0GV90 55 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 HCG22E2RYF7 251 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 INSL4Q14641 139 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 VMO1Q7Z5L0 202 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 C8orf59Q8N0T1 100 aaPredicted RBP0.53□□□□□ -2.32
GYPB-216ENST00000638448 TMEM203Q969S6 136 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 PRR15LQ9BU68 103 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 SCN3BQ9NY72 215 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 IER3IP1Q9Y5U9 82 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 LINC00312Q9Y6C7 94 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
GYPB-216ENST00000638448 A2ML1A8K2U0 1454 aa0.53□□□□□ -2.33
GYPB-216ENST00000638448 ABCA1O95477 2261 aa0.52□□□□□ -2.33
GYPB-216ENST00000638448 TMEM14DPA8MWL7 114 aa0.52□□□□□ -2.33
GYPB-216ENST00000638448 IFNGP01579 166 aa0.52□□□□□ -2.33
GYPB-216ENST00000638448 CYP4F30PQ9H0H9 118 aa0.52□□□□□ -2.33
GYPB-216ENST00000638448 PROK2Q9HC23 129 aa0.52□□□□□ -2.33
GYPB-216ENST00000638448 LRRC37A3O60309 1634 aa0.52□□□□□ -2.33
GYPB-216ENST00000638448 MYH6P13533 1939 aa0.52□□□□□ -2.33
GYPB-216ENST00000638448 CORTO00230 105 aa0.51□□□□□ -2.33
GYPB-216ENST00000638448 S100A7L2Q5SY68 101 aa0.51□□□□□ -2.33
GYPB-216ENST00000638448 MEGF8Q7Z7M0 2845 aa0.51□□□□□ -2.33
GYPB-216ENST00000638448 CASKIN1Q8WXD9 1431 aa0.51□□□□□ -2.33
GYPB-216ENST00000638448 KIF13AQ9H1H9 1805 aa0.51□□□□□ -2.33
GYPB-216ENST00000638448 KCPQ6ZWJ8 1503 aa0.5□□□□□ -2.33
GYPB-216ENST00000638448 TRGV1A0A0A0MS02 117 aa0.5□□□□□ -2.33
GYPB-216ENST00000638448 SSSCA1O60232 199 aa0.5□□□□□ -2.33
GYPB-216ENST00000638448 Q6ZRX8 168 aa0.5□□□□□ -2.33
GYPB-216ENST00000638448 AQP10Q96PS8 301 aa0.5□□□□□ -2.33
GYPB-216ENST00000638448 TANC1Q9C0D5 1861 aa0.5□□□□□ -2.33
GYPB-216ENST00000638448 MUC22E2RYF6 1773 aaPredicted RBP0.5□□□□□ -2.33
GYPB-216ENST00000638448 KTN1Q86UP2 1357 aaKnown RBP0.49□□□□□ -2.33
GYPB-216ENST00000638448 BDP1A6H8Y1 2624 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 LINC00587B1AMM8 73 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 ACYP2P14621 99 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 GNG4P50150 75 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 MRPS10P82664 201 aaKnown RBP0.49□□□□□ -2.33
GYPB-216ENST00000638448 RBM3P98179 157 aaKnown RBP0.49□□□□□ -2.33
GYPB-216ENST00000638448 C5orf38Q86SI9 138 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 BAGE3Q86Y29 109 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 LENEPQ9Y5L5 61 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 MAP2P11137 1827 aaKnown RBP0.49□□□□□ -2.33
GYPB-216ENST00000638448 NRXN2Q9P2S2 1712 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
GYPB-216ENST00000638448 PLXNA1Q9UIW2 1896 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 MIF4GDA9UHW6 222 aaKnown RBP0.48□□□□□ -2.33
GYPB-216ENST00000638448 PIN1P1O15428 100 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 PRH1P02810 166 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 SMIM6P0DI80 62 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 CCL18P55774 89 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 TPPP2P59282 170 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 CATR1Q13166 79 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 COMMD6Q7Z4G1 85 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 NAV3Q8IVL0 2385 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 PHIPQ8WWQ0 1821 aa0.48□□□□□ -2.33
GYPB-216ENST00000638448 PPIP5K1Q6PFW1 1433 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 BCORL1Q5H9F3 1711 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 F6UZH7 168 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 WHAMMP3Q1A5X7 153 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 C10orf128Q5T292 105 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 MRPL54Q6P161 138 aaKnown RBP0.47□□□□□ -2.33
GYPB-216ENST00000638448 SMR3AQ99954 134 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 R4GMQ9 66 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 SSC5DA1L4H1 1573 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 LAMC3Q9Y6N6 1575 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 ZMYM4Q5VZL5 1548 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 LOC285556D6RIA3 1793 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 CPSF1Q10570 1443 aaKnown RBP0.47□□□□□ -2.33
GYPB-216ENST00000638448 ANK2Q01484 3957 aa0.47□□□□□ -2.33
GYPB-216ENST00000638448 OOSP1A8MZH6 123 aa0.46□□□□□ -2.34
GYPB-216ENST00000638448 TTC9CQ8N5M4 171 aa0.46□□□□□ -2.34
GYPB-216ENST00000638448 FAM135AQ9P2D6 1515 aa0.46□□□□□ -2.34
GYPB-216ENST00000638448 PHLPP1O60346 1717 aa0.46□□□□□ -2.34
GYPB-216ENST00000638448 MYOM2P54296 1465 aa0.46□□□□□ -2.34
GYPB-216ENST00000638448 NALCNQ8IZF0 1738 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 TRAV1-2A0A0B4J238 106 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 UBE2L5PA0A1B0GUS4 154 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 PPP1R17O96001 155 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 KRTAP2-3P0C7H8 128 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 GCHFRP30047 84 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 ATP5EP56381 51 aaPredicted RBP0.45□□□□□ -2.34
GYPB-216ENST00000638448 UBE2L3P68036 154 aaKnown RBP0.45□□□□□ -2.34
GYPB-216ENST00000638448 KRTAP2-4Q9BYR9 128 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 KRTAP2-1Q9BYU5 128 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms