RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 LGALS9CQ6DKI2 356 aa11.07□□□□□ -0.64
CLN6-216ENST00000636876 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
CLN6-216ENST00000636876 NEXN-AS1Q8NBZ9 246 aa11.07□□□□□ -0.64
CLN6-216ENST00000636876 LINC00476Q8WZB0 136 aa11.07□□□□□ -0.64
CLN6-216ENST00000636876 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
CLN6-216ENST00000636876 ESRGQ1W209 222 aa11.06□□□□□ -0.64
CLN6-216ENST00000636876 RASL11AQ6T310 242 aa11.06□□□□□ -0.64
CLN6-216ENST00000636876 ATRAIDQ6UW56 229 aa11.06□□□□□ -0.64
CLN6-216ENST00000636876 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
CLN6-216ENST00000636876 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
CLN6-216ENST00000636876 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
CLN6-216ENST00000636876 RNF185Q96GF1 192 aa11.06□□□□□ -0.64
CLN6-216ENST00000636876 URGCP-MRPS24S4R325 110 aa11.06□□□□□ -0.64
CLN6-216ENST00000636876 HYDINQ4G0P3 5121 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 TRBV7-3A0A075B6L6 115 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 RAB4AP20338 218 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 CCL18P55774 89 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 FAM104BQ5XKR9 115 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 ATP6V0E2Q8NHE4 81 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 FRZBQ92765 325 aa11.05□□□□□ -0.64
CLN6-216ENST00000636876 LCE6AA0A183 80 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 LY6G6CO95867 125 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 UBE2D3P61077 147 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 UBE2D2P62837 147 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 LYPD5Q6UWN5 251 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 UBE2DNLQ8IWF7 75 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 DNAJC30Q96LL9 226 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 LINC00588Q9Y4M8 146 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 DNAH6Q9C0G6 4158 aa11.04□□□□□ -0.64
CLN6-216ENST00000636876 TIRAPP58753 221 aa11.03□□□□□ -0.64
CLN6-216ENST00000636876 NIT2Q9NQR4 276 aa11.03□□□□□ -0.64
CLN6-216ENST00000636876 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.65
CLN6-216ENST00000636876 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
CLN6-216ENST00000636876 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
CLN6-216ENST00000636876 TNFRSF18Q9Y5U5 241 aa11.02□□□□□ -0.65
CLN6-216ENST00000636876 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
CLN6-216ENST00000636876 SMKR1H3BMG3 65 aa11□□□□□ -0.65
CLN6-216ENST00000636876 GAS8-AS1O95177 125 aa11□□□□□ -0.65
CLN6-216ENST00000636876 NCR2O95944 276 aa11□□□□□ -0.65
CLN6-216ENST00000636876 ELOBQ15370 118 aa10.99□□□□□ -0.65
CLN6-216ENST00000636876 OR10J3Q5JRS4 329 aa10.99□□□□□ -0.65
CLN6-216ENST00000636876 TMEM136Q6ZRR5 245 aa10.99□□□□□ -0.65
CLN6-216ENST00000636876 UPK3BQ9BT76 320 aa10.99□□□□□ -0.65
CLN6-216ENST00000636876 TGIF2-C20orf24A0A0A6YYL0 155 aa10.98□□□□□ -0.65
CLN6-216ENST00000636876 IGHV3-38A0A0C4DH36 116 aa10.98□□□□□ -0.65
CLN6-216ENST00000636876 TRBV6-5A0A0K0K1A5 114 aa10.98□□□□□ -0.65
CLN6-216ENST00000636876 CKS2P33552 79 aa10.98□□□□□ -0.65
CLN6-216ENST00000636876 RPS10P46783 165 aaKnown RBP10.98□□□□□ -0.65
CLN6-216ENST00000636876 LELP1Q5T871 98 aa10.98□□□□□ -0.65
CLN6-216ENST00000636876 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
CLN6-216ENST00000636876 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.98□□□□□ -0.65
CLN6-216ENST00000636876 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
CLN6-216ENST00000636876 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
CLN6-216ENST00000636876 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
CLN6-216ENST00000636876 PPP1R17O96001 155 aa10.97□□□□□ -0.65
CLN6-216ENST00000636876 PPBPP02775 128 aa10.97□□□□□ -0.65
CLN6-216ENST00000636876 COX19Q49B96 90 aa10.97□□□□□ -0.65
CLN6-216ENST00000636876 CBLN2Q8IUK8 224 aa10.97□□□□□ -0.65
CLN6-216ENST00000636876 NRACQ8N912 160 aa10.97□□□□□ -0.65
CLN6-216ENST00000636876 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
CLN6-216ENST00000636876 D6R8Y8 96 aa10.96□□□□□ -0.65
CLN6-216ENST00000636876 HLA-DQA1P01909 254 aa10.96□□□□□ -0.65
CLN6-216ENST00000636876 GNB1LQ9BYB4 327 aa10.96□□□□□ -0.65
CLN6-216ENST00000636876 ST20Q9HBF5 79 aa10.96□□□□□ -0.65
CLN6-216ENST00000636876 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
CLN6-216ENST00000636876 TMEM97Q5BJF2 176 aa10.95□□□□□ -0.66
CLN6-216ENST00000636876 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
CLN6-216ENST00000636876 KMT2AQ03164 3969 aa10.94□□□□□ -0.66
CLN6-216ENST00000636876 TRAV8-6A0A0B4J262 113 aa10.94□□□□□ -0.66
CLN6-216ENST00000636876 MT-ND6P03923 174 aa10.94□□□□□ -0.66
CLN6-216ENST00000636876 WFDC10BQ8IUB3 73 aa10.94□□□□□ -0.66
CLN6-216ENST00000636876 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
CLN6-216ENST00000636876 TMEM70Q9BUB7 260 aa10.94□□□□□ -0.66
CLN6-216ENST00000636876 Q9H8V8 135 aa10.94□□□□□ -0.66
CLN6-216ENST00000636876 TRBV6-8A0A0A6YYG3 113 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 PHOX2AO14813 284 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 SIVA1O15304 175 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 TNFRSF6BO95407 300 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 NPYP01303 97 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 APCSP02743 223 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 POLR2KP53803 58 aaKnown RBP10.93□□□□□ -0.66
CLN6-216ENST00000636876 SUMO2P61956 95 aaKnown RBP10.93□□□□□ -0.66
CLN6-216ENST00000636876 COTL1Q14019 142 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
CLN6-216ENST00000636876 IGLV2-18A0A075B6J9 118 aa10.92□□□□□ -0.66
CLN6-216ENST00000636876 ATP6V1G1O75348 118 aa10.92□□□□□ -0.66
CLN6-216ENST00000636876 PMCHP20382 165 aa10.92□□□□□ -0.66
CLN6-216ENST00000636876 TRBV27A0A0K0K1C4 114 aa10.91□□□□□ -0.66
CLN6-216ENST00000636876 I3L3M4 83 aa10.91□□□□□ -0.66
CLN6-216ENST00000636876 IQCJQ1A5X6 159 aa10.91□□□□□ -0.66
CLN6-216ENST00000636876 KIAA1644Q3SXP7 199 aa10.91□□□□□ -0.66
CLN6-216ENST00000636876 DEFB104AQ8WTQ1 72 aa10.91□□□□□ -0.66
CLN6-216ENST00000636876 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
CLN6-216ENST00000636876 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
CLN6-216ENST00000636876 TRBV25-1A0A075B6N4 114 aa10.9□□□□□ -0.66
CLN6-216ENST00000636876 IGHV1-24A0A0C4DH33 117 aa10.9□□□□□ -0.66
CLN6-216ENST00000636876 VCYO14598 125 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms