RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 NTF3P20783 257 aa11.05□□□□□ -0.64
CACNA1A-229ENST00000636670 FOXA3P55318 350 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-229ENST00000636670 LINC00315P59091 139 aa11.05□□□□□ -0.64
CACNA1A-229ENST00000636670 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-229ENST00000636670 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-229ENST00000636670 MSRB1Q9NZV6 116 aa11.05□□□□□ -0.64
CACNA1A-229ENST00000636670 V9GYV3 84 aa11.05□□□□□ -0.64
CACNA1A-229ENST00000636670 MGPP08493 103 aa11.04□□□□□ -0.64
CACNA1A-229ENST00000636670 BTF3P20290 206 aaKnown RBP11.04□□□□□ -0.64
CACNA1A-229ENST00000636670 LELP1Q5T871 98 aa11.04□□□□□ -0.64
CACNA1A-229ENST00000636670 WFDC10BQ8IUB3 73 aa11.04□□□□□ -0.64
CACNA1A-229ENST00000636670 BORCS7Q96B45 105 aa11.04□□□□□ -0.64
CACNA1A-229ENST00000636670 TRBV7-3A0A075B6L6 115 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 F5H697 171 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 H7C1H1 209 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 K7EP13 123 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 EVI2AP22794 236 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 UBE2D3P61077 147 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 UBE2D2P62837 147 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 TWIST1Q15672 202 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 KRTAP1-5Q9BYS1 174 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 Q9UF83 564 aa11.03□□□□□ -0.64
CACNA1A-229ENST00000636670 A0A087WWC5 75 aa11.02□□□□□ -0.65
CACNA1A-229ENST00000636670 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.65
CACNA1A-229ENST00000636670 DNAH10OSP0CZ25 163 aa11.02□□□□□ -0.65
CACNA1A-229ENST00000636670 UQCC3Q6UW78 93 aa11.02□□□□□ -0.65
CACNA1A-229ENST00000636670 C6orf223Q8N319 242 aa11.02□□□□□ -0.65
CACNA1A-229ENST00000636670 PGLYRP4Q96LB8 373 aa11.02□□□□□ -0.65
CACNA1A-229ENST00000636670 TNP2Q05952 138 aa11.01□□□□□ -0.65
CACNA1A-229ENST00000636670 PNRC1Q12796 327 aaPredicted RBP11.01□□□□□ -0.65
CACNA1A-229ENST00000636670 OR10J3Q5JRS4 329 aa11.01□□□□□ -0.65
CACNA1A-229ENST00000636670 SUMO4Q6EEV6 95 aa11.01□□□□□ -0.65
CACNA1A-229ENST00000636670 SMIM15Q7Z3B0 74 aa11.01□□□□□ -0.65
CACNA1A-229ENST00000636670 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
CACNA1A-229ENST00000636670 A0A1B0GUT8 65 aa11□□□□□ -0.65
CACNA1A-229ENST00000636670 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
CACNA1A-229ENST00000636670 TRAV9-2A0A087WT02 112 aa10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 M0QY20 66 aa10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 C10orf126Q8N4M7 172 aa10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 DNAJC30Q96LL9 226 aa10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 NAT8BQ9UHF3 227 aa10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 SRRM2Q9UQ35 2752 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-229ENST00000636670 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
CACNA1A-229ENST00000636670 RASL11AQ6T310 242 aa10.98□□□□□ -0.65
CACNA1A-229ENST00000636670 PPP1R2P9O14990 202 aa10.97□□□□□ -0.65
CACNA1A-229ENST00000636670 TMEM97Q5BJF2 176 aa10.97□□□□□ -0.65
CACNA1A-229ENST00000636670 NUP35Q8NFH5 326 aa10.97□□□□□ -0.65
CACNA1A-229ENST00000636670 FRZBQ92765 325 aa10.97□□□□□ -0.65
CACNA1A-229ENST00000636670 RIGQ13278 110 aa10.96□□□□□ -0.65
CACNA1A-229ENST00000636670 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-229ENST00000636670 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-229ENST00000636670 TNFRSF18Q9Y5U5 241 aa10.96□□□□□ -0.65
CACNA1A-229ENST00000636670 COMMD7Q86VX2 200 aa10.95□□□□□ -0.66
CACNA1A-229ENST00000636670 TMEM191AQ9H0A3 160 aa10.95□□□□□ -0.66
CACNA1A-229ENST00000636670 NIT2Q9NQR4 276 aa10.95□□□□□ -0.66
CACNA1A-229ENST00000636670 ADCYAP1P18509 176 aa10.94□□□□□ -0.66
CACNA1A-229ENST00000636670 CHCHD7Q9BUK0 85 aa10.94□□□□□ -0.66
CACNA1A-229ENST00000636670 TRBV6-8A0A0A6YYG3 113 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 A0A1B0GW15 77 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 TMEM218A2RU14 115 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 LINC00862A6NCI5 91 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 LAGE3Q14657 143 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 NFE4Q86UQ8 179 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 GATD1Q8NB37 220 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 ANAPC16Q96DE5 110 aa10.93□□□□□ -0.66
CACNA1A-229ENST00000636670 TRAV26-2A0A0B4J265 109 aa10.92□□□□□ -0.66
CACNA1A-229ENST00000636670 MT-ND4LP03901 98 aa10.92□□□□□ -0.66
CACNA1A-229ENST00000636670 Q6ZRN7 208 aaPredicted RBP10.92□□□□□ -0.66
CACNA1A-229ENST00000636670 SPATA12Q7Z6I5 190 aa10.92□□□□□ -0.66
CACNA1A-229ENST00000636670 NIT1Q86X76 327 aa10.92□□□□□ -0.66
CACNA1A-229ENST00000636670 FAT1Q14517 4588 aa10.92□□□□□ -0.66
CACNA1A-229ENST00000636670 F8W036 122 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 IGHV3-30P01768 117 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 IGHV3-33P01772 117 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 IGHV3-30-3P0DP02 117 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 IGHV3-30-5P0DP03 117 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 PKIAP61925 76 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 KCNIP4Q6PIL6 250 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 SEC11CQ9BY50 192 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 URGCP-MRPS24S4R325 110 aa10.91□□□□□ -0.66
CACNA1A-229ENST00000636670 FLG2Q5D862 2391 aaPredicted RBP10.9□□□□□ -0.66
CACNA1A-229ENST00000636670 TRBV25-1A0A075B6N4 114 aa10.9□□□□□ -0.66
CACNA1A-229ENST00000636670 IBA57-AS1B1ANH7 110 aa10.9□□□□□ -0.66
CACNA1A-229ENST00000636670 S100A8P05109 93 aa10.9□□□□□ -0.66
CACNA1A-229ENST00000636670 ATP5L2Q7Z4Y8 100 aa10.9□□□□□ -0.66
CACNA1A-229ENST00000636670 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
CACNA1A-229ENST00000636670 RNF185Q96GF1 192 aa10.9□□□□□ -0.66
CACNA1A-229ENST00000636670 A0A1B0GXF2 115 aa10.89□□□□□ -0.67
CACNA1A-229ENST00000636670 HBBP68871 147 aa10.89□□□□□ -0.67
CACNA1A-229ENST00000636670 IQCJQ1A5X6 159 aa10.89□□□□□ -0.67
CACNA1A-229ENST00000636670 NTM-AS1Q6ZSK4 140 aa10.89□□□□□ -0.67
CACNA1A-229ENST00000636670 AMN1Q8IY45 258 aa10.89□□□□□ -0.67
CACNA1A-229ENST00000636670 Q8N3U1 123 aa10.89□□□□□ -0.67
CACNA1A-229ENST00000636670 RPL39LQ96EH5 51 aaKnown RBP10.89□□□□□ -0.67
CACNA1A-229ENST00000636670 A0A087WX48 190 aa10.88□□□□□ -0.67
CACNA1A-229ENST00000636670 IGHV1-24A0A0C4DH33 117 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms