RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 NTN5Q8WTR8 489 aaPredicted RBP6.68□□□□□ -1.34
PCDHGC3-207ENST00000622656 UBE2WQ96B02 151 aa6.68□□□□□ -1.34
PCDHGC3-207ENST00000622656 TPPP3Q9BW30 176 aa6.68□□□□□ -1.34
PCDHGC3-207ENST00000622656 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
PCDHGC3-207ENST00000622656 BOLA1Q9Y3E2 137 aa6.68□□□□□ -1.34
PCDHGC3-207ENST00000622656 IGKV2D-24A0A075B6R9 120 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 F5H697 171 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 BCL2P10415 239 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 SLC51BQ86UW2 128 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 C9orf62Q8N4C0 152 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 Q8N976 141 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 FER1L6-AS1Q8NA97 138 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 DEFB104AQ8WTQ1 72 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 MED9Q9NWA0 146 aa6.67□□□□□ -1.34
PCDHGC3-207ENST00000622656 A0A087WX48 190 aa6.66□□□□□ -1.34
PCDHGC3-207ENST00000622656 TMEM262E9PQX1 116 aa6.66□□□□□ -1.34
PCDHGC3-207ENST00000622656 K7EN84 100 aa6.66□□□□□ -1.34
PCDHGC3-207ENST00000622656 GNG4P50150 75 aa6.66□□□□□ -1.34
PCDHGC3-207ENST00000622656 LYZL1Q6UWQ5 148 aa6.66□□□□□ -1.34
PCDHGC3-207ENST00000622656 TMEM70Q9BUB7 260 aa6.66□□□□□ -1.34
PCDHGC3-207ENST00000622656 URGCP-MRPS24S4R325 110 aa6.66□□□□□ -1.34
PCDHGC3-207ENST00000622656 M0QY20 66 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 PDE6DO43924 150 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 MGPP08493 103 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 TOR2AQ5JU69 321 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 SUMO4Q6EEV6 95 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 EIF5AL1Q6IS14 154 aaKnown RBP6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 ATRAIDQ6UW56 229 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 ALKAL2Q6UX46 152 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 Q6ZSA8 131 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 C15orf54Q8N8G6 183 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 NUDT10Q8NFP7 164 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 FRZBQ92765 325 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 DAZAP1Q96EP5 407 aaKnown RBP6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 NUDT11Q96G61 164 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 AP1S3Q96PC3 154 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
PCDHGC3-207ENST00000622656 IFNA1P01562 189 aa6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 P01737 135 aa6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 ANGP03950 147 aaKnown RBP6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 GAGE6Q13070 117 aa6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 OCC1Q8TAD7 63 aa6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 CHCHD5Q9BSY4 110 aa6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 CHCHD7Q9BUK0 85 aa6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 RNASE7Q9H1E1 156 aaKnown RBP6.64□□□□□ -1.35
PCDHGC3-207ENST00000622656 TEX46H3BTG2 121 aa6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 SMIM17P0DL12 118 aa6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 NTF3P20783 257 aa6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 NKX2-5P52952 324 aaPredicted RBP6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 RPS20P60866 119 aaKnown RBP6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 RBX1P62877 108 aa6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 AKAP14Q86UN6 197 aa6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 SMIM12Q96EX1 92 aa6.63□□□□□ -1.35
PCDHGC3-207ENST00000622656 A0A1B0GVG6 124 aa6.62□□□□□ -1.35
PCDHGC3-207ENST00000622656 CTRLP40313 264 aa6.62□□□□□ -1.35
PCDHGC3-207ENST00000622656 FOXA3P55318 350 aaPredicted RBP6.62□□□□□ -1.35
PCDHGC3-207ENST00000622656 CACNG7P62955 275 aa6.62□□□□□ -1.35
PCDHGC3-207ENST00000622656 RMI2Q96E14 147 aa6.62□□□□□ -1.35
PCDHGC3-207ENST00000622656 GFRA4Q9GZZ7 299 aa6.62□□□□□ -1.35
PCDHGC3-207ENST00000622656 COX11Q9Y6N1 276 aa6.62□□□□□ -1.35
PCDHGC3-207ENST00000622656 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 TRAV26-2A0A0B4J265 109 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 ELOBQ15370 118 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 IQCJQ1A5X6 159 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 LINC00269Q8N2A0 174 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 LYPD6BQ8NI32 183 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 GTSF1Q8WW33 167 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 C1orf43Q9BWL3 253 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 RPP21Q9H633 154 aaKnown RBP6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 PRR34Q9NV39 138 aa6.61□□□□□ -1.35
PCDHGC3-207ENST00000622656 TRBV25-1A0A075B6N4 114 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 USP17L23D6RBM5 183 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 F2Z2F3 143 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 HLA-DQA1P01909 254 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 CRPP02741 224 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 Q0VG73 95 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 KCNIP4Q6PIL6 250 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 RASL11AQ6T310 242 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 GATD1Q8NB37 220 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 C20orf203Q8NBC4 194 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 DPH3P1Q9H4G8 78 aa6.6□□□□□ -1.35
PCDHGC3-207ENST00000622656 IGLV10-54A0A075B6I4 117 aa6.59□□□□□ -1.35
PCDHGC3-207ENST00000622656 IGHV1-24A0A0C4DH33 117 aa6.59□□□□□ -1.35
PCDHGC3-207ENST00000622656 XKRY2A2RUG3 117 aa6.59□□□□□ -1.35
PCDHGC3-207ENST00000622656 PRSS1P07477 247 aa6.59□□□□□ -1.35
PCDHGC3-207ENST00000622656 LINC00528Q8N1L1 170 aa6.59□□□□□ -1.35
PCDHGC3-207ENST00000622656 CNFNQ9BYD5 112 aa6.59□□□□□ -1.35
PCDHGC3-207ENST00000622656 NIT2Q9NQR4 276 aa6.59□□□□□ -1.35
PCDHGC3-207ENST00000622656 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.36
PCDHGC3-207ENST00000622656 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 H7C1H1 209 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 GAS8-AS1O95177 125 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 TRGC1P0CF51 173 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 CEBPGP53567 150 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms