RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 RPL39LQ96EH5 51 aaKnown RBP7.54□□□□□ -1.2
POLR2J3-221ENST00000621093 LINC00588Q9Y4M8 146 aa7.54□□□□□ -1.2
POLR2J3-221ENST00000621093 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 S100PP25815 95 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 UBE2D3P61077 147 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 UBE2D2P62837 147 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 RPL36AP83881 106 aaKnown RBP7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 ATP6V0E2Q8NHE4 81 aa7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 RPL36ALQ969Q0 106 aaKnown RBP7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 PLECQ15149 4684 aaKnown RBP7.53□□□□□ -1.2
POLR2J3-221ENST00000621093 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 H7C1H1 209 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 S100A8P05109 93 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 RPS10P46783 165 aaKnown RBP7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 LGALS9CQ6DKI2 356 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 TMEM136Q6ZRR5 245 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 CBLN2Q8IUK8 224 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 DEFB104AQ8WTQ1 72 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 NIT2Q9NQR4 276 aa7.52□□□□□ -1.21
POLR2J3-221ENST00000621093 TRAV9-1A0A075B6T8 112 aa7.51□□□□□ -1.21
POLR2J3-221ENST00000621093 LCE6AA0A183 80 aa7.51□□□□□ -1.21
POLR2J3-221ENST00000621093 CCL18P55774 89 aa7.51□□□□□ -1.21
POLR2J3-221ENST00000621093 ELOBQ15370 118 aa7.51□□□□□ -1.21
POLR2J3-221ENST00000621093 YPEL4Q96NS1 127 aa7.51□□□□□ -1.21
POLR2J3-221ENST00000621093 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
POLR2J3-221ENST00000621093 SCO1O75880 301 aa7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 OR10J3Q5JRS4 329 aa7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 NRACQ8N912 160 aa7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 MRAP2Q96G30 205 aa7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 GTSF1LQ9H1H1 148 aa7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 MRPS16Q9Y3D3 137 aaKnown RBP7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
POLR2J3-221ENST00000621093 D6R8Y8 96 aa7.49□□□□□ -1.21
POLR2J3-221ENST00000621093 SH2D6Q7Z4S9 175 aa7.49□□□□□ -1.21
POLR2J3-221ENST00000621093 WFDC10BQ8IUB3 73 aa7.49□□□□□ -1.21
POLR2J3-221ENST00000621093 IGLV2-18A0A075B6J9 118 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 ATP6V1G1O75348 118 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 NPYP01303 97 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 CKS2P33552 79 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 KIAA1644Q3SXP7 199 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 NTM-AS1Q6ZSK4 140 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 FRZBQ92765 325 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 SMCO4Q9NRQ5 59 aa7.48□□□□□ -1.21
POLR2J3-221ENST00000621093 TRBV24-1A0A075B6N3 115 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 SDHAF1A6NFY7 115 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 TIRAPP58753 221 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 LELP1Q5T871 98 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 UPK3BQ9BT76 320 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 GNB1LQ9BYB4 327 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 ST20Q9HBF5 79 aa7.47□□□□□ -1.21
POLR2J3-221ENST00000621093 M0R2N4 97 aa7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 APCSP02743 223 aa7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 POLR2KP53803 58 aaKnown RBP7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 DAZ4Q86SG3 579 aaKnown RBP7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 Q8N3U1 123 aa7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 PRELID3AQ96N28 172 aa7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 Q9H8V8 135 aa7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 DAZ3Q9NR90 486 aaKnown RBP7.46□□□□□ -1.22
POLR2J3-221ENST00000621093 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
POLR2J3-221ENST00000621093 SIVA1O15304 175 aa7.45□□□□□ -1.22
POLR2J3-221ENST00000621093 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
POLR2J3-221ENST00000621093 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
POLR2J3-221ENST00000621093 LYSTQ99698 3801 aa7.45□□□□□ -1.22
POLR2J3-221ENST00000621093 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
POLR2J3-221ENST00000621093 TRAV8-6A0A0B4J262 113 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 I3L3M4 83 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 TSHBP01222 138 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 IGHV3-30P01768 117 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 IGHV3-33P01772 117 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 PPBPP02775 128 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 IGHV3-30-3P0DP02 117 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 IGHV3-30-5P0DP03 117 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 PMCHP20382 165 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 SUMO2P61956 95 aaKnown RBP7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 FABP9Q0Z7S8 132 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 COX19Q49B96 90 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 KRTAP1-5Q9BYS1 174 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
POLR2J3-221ENST00000621093 DNAH1Q9P2D7 4330 aa7.43□□□□□ -1.22
POLR2J3-221ENST00000621093 LOC389332A0A1B0GUA5 103 aa7.43□□□□□ -1.22
POLR2J3-221ENST00000621093 COLCA2A8K830 154 aa7.43□□□□□ -1.22
POLR2J3-221ENST00000621093 PPP1R17O96001 155 aa7.43□□□□□ -1.22
POLR2J3-221ENST00000621093 COTL1Q14019 142 aa7.43□□□□□ -1.22
POLR2J3-221ENST00000621093 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.43□□□□□ -1.22
POLR2J3-221ENST00000621093 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
POLR2J3-221ENST00000621093 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
POLR2J3-221ENST00000621093 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
POLR2J3-221ENST00000621093 NBDYA0A0U1RRE5 68 aa7.42□□□□□ -1.22
POLR2J3-221ENST00000621093 VCYO14598 125 aa7.42□□□□□ -1.22
POLR2J3-221ENST00000621093 PHOX2AO14813 284 aa7.42□□□□□ -1.22
POLR2J3-221ENST00000621093 MT-ND6P03923 174 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms