RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 HERVK_113P61574 105 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 SPATA25Q9BR10 227 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 CHCHD5Q9BSY4 110 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 SMPXQ9UHP9 88 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
FAM3A-221ENST00000612856 RPL13AP40429 203 aaKnown RBP8.3□□□□□ -1.08
FAM3A-221ENST00000612856 CLPSL1A2RUU4 121 aa8.3□□□□□ -1.08
FAM3A-221ENST00000612856 TEX22C9J3V5 150 aa8.3□□□□□ -1.08
FAM3A-221ENST00000612856 FANCD2OSQ96PS1 177 aa8.3□□□□□ -1.08
FAM3A-221ENST00000612856 KLF12Q9Y4X4 402 aa8.3□□□□□ -1.08
FAM3A-221ENST00000612856 A0A0J9YY99 117 aa8.3□□□□□ -1.08
FAM3A-221ENST00000612856 C19orf71A6NCJ1 209 aa8.3□□□□□ -1.08
FAM3A-221ENST00000612856 TSPAN13O95857 204 aa8.3□□□□□ -1.08
FAM3A-221ENST00000612856 IGHV3-38A0A0C4DH36 116 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 TNFRSF13BO14836 293 aaPredicted RBP8.29□□□□□ -1.08
FAM3A-221ENST00000612856 LGALS1P09382 135 aaKnown RBP8.29□□□□□ -1.08
FAM3A-221ENST00000612856 IFITM1P13164 125 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 GP9P14770 177 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 ERG28Q9UKR5 140 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 IGHV7-4-1A0A0J9YVY3 117 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 C11orf68Q9H3H3 251 aaKnown RBP8.29□□□□□ -1.08
FAM3A-221ENST00000612856 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 NDUFA4O00483 81 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 SUMO2P61956 95 aaKnown RBP8.29□□□□□ -1.08
FAM3A-221ENST00000612856 ODF1Q14990 250 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 DEFB135Q30KP9 77 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.29□□□□□ -1.08
FAM3A-221ENST00000612856 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 IGHG2P01859 326 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 POU2AF1Q16633 256 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 LINC00482Q8N8I6 264 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 MLST8Q9BVC4 326 aa8.29□□□□□ -1.08
FAM3A-221ENST00000612856 IGLV11-55A0A075B6I3 123 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 A6NDX4 124 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 CCDC179H3BU77 68 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
FAM3A-221ENST00000612856 NTN5Q8WTR8 489 aaPredicted RBP8.28□□□□□ -1.08
FAM3A-221ENST00000612856 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 I3L2K1 104 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 OXLD1Q5BKU9 147 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 C19orf54Q5BKX5 351 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 PRAC2D3DTV9 90 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 LAGE3Q14657 143 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 PIFOQ8TCI5 191 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 NBEAL2Q6ZNJ1 2754 aa8.28□□□□□ -1.08
FAM3A-221ENST00000612856 NPC2P61916 151 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 CFHR4Q92496 578 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 HRNRQ86YZ3 2850 aaPredicted RBP8.27□□□□□ -1.09
FAM3A-221ENST00000612856 A0A087WX48 190 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 ANKRD29Q8N6D5 301 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 GNRH2O43555 120 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 LINC01006Q8NI28 216 aa8.27□□□□□ -1.09
FAM3A-221ENST00000612856 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
FAM3A-221ENST00000612856 SLC25A20O43772 301 aa8.26□□□□□ -1.09
FAM3A-221ENST00000612856 EGR2P11161 476 aaPredicted RBP8.26□□□□□ -1.09
FAM3A-221ENST00000612856 TEN1Q86WV5 123 aa8.26□□□□□ -1.09
FAM3A-221ENST00000612856 C15orf53Q8NAA6 179 aa8.26□□□□□ -1.09
FAM3A-221ENST00000612856 NPBQ8NG41 125 aa8.26□□□□□ -1.09
FAM3A-221ENST00000612856 A0A096LNJ9 63 aa8.26□□□□□ -1.09
FAM3A-221ENST00000612856 INSP01308 110 aa8.26□□□□□ -1.09
FAM3A-221ENST00000612856 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
FAM3A-221ENST00000612856 Q6YL49 198 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 FAM110AQ9BQ89 295 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 AGPAT4-IT1Q9H0P7 198 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 ODF3BA8MYP8 253 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 CELSR1Q9NYQ6 3014 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 H7C1H1 209 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 LRRC75A-AS1Q8N1F1 130 aa8.25□□□□□ -1.09
FAM3A-221ENST00000612856 IGKV1D-37A0A075B6S9 117 aa8.24□□□□□ -1.09
FAM3A-221ENST00000612856 VCX2Q9H322 139 aa8.24□□□□□ -1.09
FAM3A-221ENST00000612856 NOP10Q9NPE3 64 aaKnown RBP8.24□□□□□ -1.09
FAM3A-221ENST00000612856 HIGD1BQ9P298 99 aa8.24□□□□□ -1.09
FAM3A-221ENST00000612856 PRM2P04554 102 aa8.24□□□□□ -1.09
FAM3A-221ENST00000612856 PLNP26678 52 aa8.24□□□□□ -1.09
FAM3A-221ENST00000612856 TM2D2Q9BX73 214 aa8.24□□□□□ -1.09
FAM3A-221ENST00000612856 TRPT1Q86TN4 253 aaKnown RBP8.24□□□□□ -1.09
FAM3A-221ENST00000612856 CELSR2Q9HCU4 2923 aa8.24□□□□□ -1.09
FAM3A-221ENST00000612856 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 DAD1P61803 113 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 CLPSL2Q6UWE3 100 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 EDN2P20800 178 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 NDUFV3P56181 108 aaKnown RBP8.23□□□□□ -1.09
FAM3A-221ENST00000612856 TMEM190Q8WZ59 177 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 CCDC140Q96MF4 163 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 H3BRN7 92 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 CRIP1P50238 77 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 C8orf31Q8N9H6 132 aa8.23□□□□□ -1.09
FAM3A-221ENST00000612856 BUB3O43684 328 aa8.22□□□□□ -1.09
FAM3A-221ENST00000612856 TCL1BO95988 128 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms