RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 Q8N6K4 173 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 ODF3Q96PU9 254 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 CRYGAP11844 174 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 LEPP41159 167 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
PCDHGC3-202ENST00000611950 PRSS1P07477 247 aa8.15□□□□□ -1.1
PCDHGC3-202ENST00000611950 LYRM7Q5U5X0 104 aa8.15□□□□□ -1.1
PCDHGC3-202ENST00000611950 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.1
PCDHGC3-202ENST00000611950 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
PCDHGC3-202ENST00000611950 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
PCDHGC3-202ENST00000611950 ZNF469Q96JG9 3925 aaPredicted RBP8.15□□□□□ -1.1
PCDHGC3-202ENST00000611950 AGRNO00468 2067 aa8.15□□□□□ -1.11
PCDHGC3-202ENST00000611950 JMJD1CQ15652 2540 aa8.15□□□□□ -1.11
PCDHGC3-202ENST00000611950 IGKV2D-26A0A0A0MRZ7 120 aa8.15□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRAV8-2A0A0B4J237 113 aa8.15□□□□□ -1.11
PCDHGC3-202ENST00000611950 C12orf74Q32Q52 190 aa8.15□□□□□ -1.11
PCDHGC3-202ENST00000611950 ZNF575Q86XF7 245 aa8.15□□□□□ -1.11
PCDHGC3-202ENST00000611950 C11orf21Q9P2W6 132 aa8.15□□□□□ -1.11
PCDHGC3-202ENST00000611950 IGF1P05019 195 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 TMEM258P61165 79 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 SRSF9Q13242 221 aaKnown RBP eCLIP8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 PDE6HQ13956 83 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 Q8N9W7 124 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 NOTCH3Q9UM47 2321 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 SAA4P35542 130 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 ANKRD29Q8N6D5 301 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
PCDHGC3-202ENST00000611950 A0A0U1RQV1 116 aa8.13□□□□□ -1.11
PCDHGC3-202ENST00000611950 GTSCR1Q86UQ5 136 aa8.13□□□□□ -1.11
PCDHGC3-202ENST00000611950 EBI3Q14213 229 aa8.13□□□□□ -1.11
PCDHGC3-202ENST00000611950 TMEM158Q8WZ71 300 aa8.13□□□□□ -1.11
PCDHGC3-202ENST00000611950 RNF185Q96GF1 192 aa8.13□□□□□ -1.11
PCDHGC3-202ENST00000611950 FOXC2Q99958 501 aa8.13□□□□□ -1.11
PCDHGC3-202ENST00000611950 LGALS1P09382 135 aaKnown RBP8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 BRD3OSQ6XYD6 125 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 POM121L12Q8N7R1 296 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 LINC00482Q8N8I6 264 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 AGPAT4-IT1Q9H0P7 198 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 HHLA3Q9XRX5 114 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 IGKV3D-20A0A0C4DH25 116 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRACP01848 142 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 ELANEP08246 267 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 CCDC140Q96MF4 163 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 BPESC1Q9GZL8 116 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 TLN2Q9Y4G6 2542 aa8.12□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRBV7-7A0A0K0K1E9 115 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 A8MWV9 139 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 BUB3O43684 328 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 EFNA4P52798 201 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 MINOS1Q5TGZ0 78 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 MINOS1-NBL1R4GNA1 71 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 H3BVH4 76 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 AVPP01185 164 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 PRIMA1Q86XR5 153 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 LINC01561Q8N1V8 128 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 SPANXDQ9BXN6 97 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 DPM2O94777 84 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 COX7CP15954 63 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 LGALS9BQ3B8N2 356 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 LGALS9CQ6DKI2 356 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 TMEM190Q8WZ59 177 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 U3KQK5 164 aa8.11□□□□□ -1.11
PCDHGC3-202ENST00000611950 M0R381 172 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRBV12-3P01733 135 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 CD164Q04900 197 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 LY6EQ16553 131 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRAV2A0A0B4J234 112 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 CLPSL1A2RUU4 121 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 PRR9Q5T870 116 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 SPANXN1Q5VSR9 72 aa8.1□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRAV40A0A0B4J280 105 aa8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 F6UB75 175 aa8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 H7C1H1 209 aa8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 PAX8Q06710 450 aa8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 FCER1GP30273 86 aa8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 MORN3Q6PF18 240 aaPredicted RBP8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
PCDHGC3-202ENST00000611950 TRGV11A0A075B6L2 103 aa8.08□□□□□ -1.12
PCDHGC3-202ENST00000611950 SCGB1C2P0DMR2 95 aa8.08□□□□□ -1.12
PCDHGC3-202ENST00000611950 C16orf92Q96LL3 132 aa8.08□□□□□ -1.12
PCDHGC3-202ENST00000611950 PSMB2P49721 201 aa8.08□□□□□ -1.12
PCDHGC3-202ENST00000611950 MRPL35Q9NZE8 188 aaKnown RBP8.08□□□□□ -1.12
PCDHGC3-202ENST00000611950 UBE2E1P51965 193 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 LMO4P61968 165 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 DGAT2L7PQ6IED9 249 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 UNQ9165/PRO28630Q6UXU0 137 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 SMR3AQ99954 134 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 hADV29S1A0JD25 119 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 COX8CQ7Z4L0 72 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 METTL26Q96S19 204 aa8.07□□□□□ -1.12
PCDHGC3-202ENST00000611950 FN1P02751 2386 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms