RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 FAM74A3Q4VXF1 159 aa17.56■□□□□ 0.4
VEGFA-226ENST00000611736 SUMO4Q6EEV6 95 aa17.56■□□□□ 0.4
VEGFA-226ENST00000611736 DPH3P1Q9H4G8 78 aa17.56■□□□□ 0.4
VEGFA-226ENST00000611736 CT83Q5H943 113 aa17.55■□□□□ 0.4
VEGFA-226ENST00000611736 PGLYRP4Q96LB8 373 aa17.55■□□□□ 0.4
VEGFA-226ENST00000611736 OSTCQ9NRP0 149 aa17.54■□□□□ 0.4
VEGFA-226ENST00000611736 M0QY20 66 aa17.53■□□□□ 0.4
VEGFA-226ENST00000611736 SMDT1Q9H4I9 107 aa17.53■□□□□ 0.4
VEGFA-226ENST00000611736 IBA57-AS1B1ANH7 110 aa17.52■□□□□ 0.4
VEGFA-226ENST00000611736 H7C1H1 209 aa17.52■□□□□ 0.4
VEGFA-226ENST00000611736 RPL23P62829 140 aaKnown RBP17.52■□□□□ 0.4
VEGFA-226ENST00000611736 ADIRFQ15847 76 aa17.52■□□□□ 0.4
VEGFA-226ENST00000611736 Q9HAA7 133 aa17.52■□□□□ 0.4
VEGFA-226ENST00000611736 C15orf54Q8N8G6 183 aa17.51■□□□□ 0.39
VEGFA-226ENST00000611736 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-226ENST00000611736 TSKUQ8WUA8 353 aa17.51■□□□□ 0.39
VEGFA-226ENST00000611736 ISOC2Q96AB3 205 aa17.51■□□□□ 0.39
VEGFA-226ENST00000611736 NAT8Q9UHE5 227 aa17.51■□□□□ 0.39
VEGFA-226ENST00000611736 RAB14P61106 215 aa17.5■□□□□ 0.39
VEGFA-226ENST00000611736 URGCP-MRPS24S4R325 110 aa17.5■□□□□ 0.39
VEGFA-226ENST00000611736 SPATA12Q7Z6I5 190 aa17.49■□□□□ 0.39
VEGFA-226ENST00000611736 DAZ4Q86SG3 579 aaKnown RBP17.49■□□□□ 0.39
VEGFA-226ENST00000611736 NIT1Q86X76 327 aa17.49■□□□□ 0.39
VEGFA-226ENST00000611736 DAZ3Q9NR90 486 aaKnown RBP17.49■□□□□ 0.39
VEGFA-226ENST00000611736 DNAH5Q8TE73 4624 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 LRP1BQ9NZR2 4599 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 TRBV6-8A0A0A6YYG3 113 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 HIGD1CA8MV81 97 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 FOXA3P55318 350 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-226ENST00000611736 RASL11AQ6T310 242 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 SMIM15Q7Z3B0 74 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 BORCS7Q96B45 105 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 DNAJC30Q96LL9 226 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 V9GYV3 84 aa17.48■□□□□ 0.39
VEGFA-226ENST00000611736 GFRA4Q9GZZ7 299 aa17.47■□□□□ 0.39
VEGFA-226ENST00000611736 KIAA1109Q2LD37 5005 aa17.47■□□□□ 0.39
VEGFA-226ENST00000611736 C16orf90A8MZG2 172 aa17.46■□□□□ 0.39
VEGFA-226ENST00000611736 A0A087WX48 190 aa17.45■□□□□ 0.38
VEGFA-226ENST00000611736 TRAV26-2A0A0B4J265 109 aa17.45■□□□□ 0.38
VEGFA-226ENST00000611736 LAGE3Q14657 143 aa17.45■□□□□ 0.38
VEGFA-226ENST00000611736 A0A1B0GUT8 65 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 FAM231BA6NCW3 169 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 TMEM262E9PQX1 116 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 PSCAO43653 123 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 KRTAP10-2P60368 255 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 KCNIP4Q6PIL6 250 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 NTM-AS1Q6ZSK4 140 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 NIT2Q9NQR4 276 aa17.44■□□□□ 0.38
VEGFA-226ENST00000611736 EREGO14944 169 aa17.43■□□□□ 0.38
VEGFA-226ENST00000611736 TMEM97Q5BJF2 176 aa17.43■□□□□ 0.38
VEGFA-226ENST00000611736 GATD1Q8NB37 220 aa17.43■□□□□ 0.38
VEGFA-226ENST00000611736 CHCHD5Q9BSY4 110 aa17.43■□□□□ 0.38
VEGFA-226ENST00000611736 HERC2O95714 4834 aa17.42■□□□□ 0.38
VEGFA-226ENST00000611736 A0A087WTM6 91 aa17.42■□□□□ 0.38
VEGFA-226ENST00000611736 CHCHD7Q9BUK0 85 aa17.41■□□□□ 0.38
VEGFA-226ENST00000611736 KLK12Q9UKR0 248 aa17.41■□□□□ 0.38
VEGFA-226ENST00000611736 TRAV8-3A0A0A6YYJ7 113 aa17.4■□□□□ 0.38
VEGFA-226ENST00000611736 NUP35Q8NFH5 326 aa17.4■□□□□ 0.38
VEGFA-226ENST00000611736 TRBV25-1A0A075B6N4 114 aa17.39■□□□□ 0.37
VEGFA-226ENST00000611736 CLLU1Q5K131 121 aa17.39■□□□□ 0.37
VEGFA-226ENST00000611736 FUSP35637 526 aaKnown RBP eCLIP17.38■□□□□ 0.373e-8■□□□□ 10.5
VEGFA-226ENST00000611736 IFITM2Q01629 132 aa17.38■□□□□ 0.37
VEGFA-226ENST00000611736 MPV17L2Q567V2 206 aa17.38■□□□□ 0.37
VEGFA-226ENST00000611736 DEFB104AQ8WTQ1 72 aa17.38■□□□□ 0.37
VEGFA-226ENST00000611736 RPL39LQ96EH5 51 aaKnown RBP17.38■□□□□ 0.37
VEGFA-226ENST00000611736 NAT8BQ9UHF3 227 aa17.38■□□□□ 0.37
VEGFA-226ENST00000611736 IGHV1-24A0A0C4DH33 117 aa17.37■□□□□ 0.37
VEGFA-226ENST00000611736 GAGE6Q13070 117 aa17.37■□□□□ 0.37
VEGFA-226ENST00000611736 RIGQ13278 110 aa17.37■□□□□ 0.37
VEGFA-226ENST00000611736 ELOBQ15370 118 aa17.37■□□□□ 0.37
VEGFA-226ENST00000611736 TM2D2Q9BX73 214 aa17.37■□□□□ 0.37
VEGFA-226ENST00000611736 IQCJQ1A5X6 159 aa17.36■□□□□ 0.37
VEGFA-226ENST00000611736 FRZBQ92765 325 aa17.36■□□□□ 0.37
VEGFA-226ENST00000611736 UBE2WQ96B02 151 aa17.36■□□□□ 0.37
VEGFA-226ENST00000611736 TMEM191AQ9H0A3 160 aa17.36■□□□□ 0.37
VEGFA-226ENST00000611736 SMIM27A0A1W2PRY6 76 aa17.35■□□□□ 0.37
VEGFA-226ENST00000611736 PKIAP61925 76 aa17.35■□□□□ 0.37
VEGFA-226ENST00000611736 ATRAIDQ6UW56 229 aa17.34■□□□□ 0.37
VEGFA-226ENST00000611736 Q8N976 141 aa17.34■□□□□ 0.37
VEGFA-226ENST00000611736 LRCOL1A6NCL2 159 aa17.33■□□□□ 0.36
VEGFA-226ENST00000611736 COTL1Q14019 142 aa17.33■□□□□ 0.36
VEGFA-226ENST00000611736 RYR1P21817 5038 aa17.32■□□□□ 0.36
VEGFA-226ENST00000611736 ANGP03950 147 aaKnown RBP17.32■□□□□ 0.36
VEGFA-226ENST00000611736 AMN1Q8IY45 258 aa17.32■□□□□ 0.36
VEGFA-226ENST00000611736 RMI2Q96E14 147 aa17.32■□□□□ 0.36
VEGFA-226ENST00000611736 RNF185Q96GF1 192 aa17.32■□□□□ 0.36
VEGFA-226ENST00000611736 TMEM243Q9BU79 118 aa17.32■□□□□ 0.36
VEGFA-226ENST00000611736 PGPEP1Q9NXJ5 209 aa17.32■□□□□ 0.36
VEGFA-226ENST00000611736 APOBP04114 4563 aaKnown RBP17.31■□□□□ 0.36
VEGFA-226ENST00000611736 IGKV2D-24A0A075B6R9 120 aa17.31■□□□□ 0.36
VEGFA-226ENST00000611736 GAS8-AS1O95177 125 aa17.31■□□□□ 0.36
VEGFA-226ENST00000611736 RAB4AP20338 218 aa17.3■□□□□ 0.36
VEGFA-226ENST00000611736 AMTP48728 403 aa17.3■□□□□ 0.36
VEGFA-226ENST00000611736 RBX1P62877 108 aa17.3■□□□□ 0.36
VEGFA-226ENST00000611736 HSPG2P98160 4391 aa17.29■□□□□ 0.36
VEGFA-226ENST00000611736 CRPP02741 224 aa17.29■□□□□ 0.36
VEGFA-226ENST00000611736 SDHAF1A6NFY7 115 aa17.28■□□□□ 0.36
VEGFA-226ENST00000611736 Q0VG73 95 aa17.28■□□□□ 0.36
VEGFA-226ENST00000611736 ENHOQ6UWT2 76 aa17.28■□□□□ 0.36
VEGFA-226ENST00000611736 COX11Q9Y6N1 276 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms