RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SPANXCQ9NY87 97 aa16.56■□□□□ 0.24
SHANK2-220ENST00000608988 SNRPD3P62318 126 aaKnown RBP16.55■□□□□ 0.24
SHANK2-220ENST00000608988 Q1RN00 199 aa16.55■□□□□ 0.24
SHANK2-220ENST00000608988 TRGV11A0A075B6L2 103 aa16.54■□□□□ 0.24
SHANK2-220ENST00000608988 CACNA1AO00555 2505 aa16.54■□□□□ 0.24
SHANK2-220ENST00000608988 IGHV3OR16-10A0A075B7F0 116 aa16.54■□□□□ 0.24
SHANK2-220ENST00000608988 A0A0J9YXV3 536 aa16.54■□□□□ 0.24
SHANK2-220ENST00000608988 SNCGO76070 127 aa16.54■□□□□ 0.24
SHANK2-220ENST00000608988 Q8N1Y9 231 aa16.54■□□□□ 0.24
SHANK2-220ENST00000608988 WFDC12Q8WWY7 111 aa16.54■□□□□ 0.24
SHANK2-220ENST00000608988 OPRPNQ99935 248 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-220ENST00000608988 MRPS36P82909 103 aaKnown RBP16.53■□□□□ 0.24
SHANK2-220ENST00000608988 Q5PR19 223 aa16.53■□□□□ 0.24
SHANK2-220ENST00000608988 BRD3OSQ6XYD6 125 aa16.53■□□□□ 0.24
SHANK2-220ENST00000608988 TIMM21Q9BVV7 248 aa16.53■□□□□ 0.24
SHANK2-220ENST00000608988 H3BUX3 64 aa16.52■□□□□ 0.24
SHANK2-220ENST00000608988 IGHV3-30-3P0DP02 117 aa16.52■□□□□ 0.23
SHANK2-220ENST00000608988 GAGE2BQ13066 116 aa16.52■□□□□ 0.23
SHANK2-220ENST00000608988 MRPL23Q16540 153 aaKnown RBP16.52■□□□□ 0.23
SHANK2-220ENST00000608988 LY6EQ16553 131 aa16.52■□□□□ 0.23
SHANK2-220ENST00000608988 GAGE2EQ4V326 116 aa16.52■□□□□ 0.23
SHANK2-220ENST00000608988 NTN5Q8WTR8 489 aaPredicted RBP16.52■□□□□ 0.23
SHANK2-220ENST00000608988 GAGE2DQ9UEU5 116 aa16.52■□□□□ 0.23
SHANK2-220ENST00000608988 TMEM89A2RUT3 159 aa16.51■□□□□ 0.23
SHANK2-220ENST00000608988 GAGE5Q13069 117 aa16.51■□□□□ 0.23
SHANK2-220ENST00000608988 GAGE6Q13070 117 aa16.51■□□□□ 0.23
SHANK2-220ENST00000608988 DEFB104AQ8WTQ1 72 aa16.51■□□□□ 0.23
SHANK2-220ENST00000608988 LITAFQ99732 161 aa16.51■□□□□ 0.23
SHANK2-220ENST00000608988 TRAV8-4A0A0B4J246 113 aa16.5■□□□□ 0.23
SHANK2-220ENST00000608988 H3BT86 120 aa16.5■□□□□ 0.23
SHANK2-220ENST00000608988 K7EQG2 157 aa16.5■□□□□ 0.23
SHANK2-220ENST00000608988 PIMREGQ9BSJ6 248 aa16.5■□□□□ 0.23
SHANK2-220ENST00000608988 YAE1D1Q9NRH1 226 aa16.5■□□□□ 0.23
SHANK2-220ENST00000608988 SPANXA1Q9NS26 97 aa16.5■□□□□ 0.23
SHANK2-220ENST00000608988 H7C2G1 150 aa16.49■□□□□ 0.23
SHANK2-220ENST00000608988 COX6CP09669 75 aa16.49■□□□□ 0.23
SHANK2-220ENST00000608988 DCHS2Q6V1P9 2916 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 IGHV1-58A0A0C4DH39 117 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 H3BMM0 161 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 TRIAP1O43715 76 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 IGHV4-39P01824 125 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 UBE2WQ96B02 151 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 TIMM17BO60830 172 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 CD28P10747 220 aa16.48■□□□□ 0.23
SHANK2-220ENST00000608988 TLN1Q9Y490 2541 aaKnown RBP16.47■□□□□ 0.23
SHANK2-220ENST00000608988 BLCAPP62952 87 aa16.47■□□□□ 0.23
SHANK2-220ENST00000608988 MIAQ16674 131 aa16.47■□□□□ 0.23
SHANK2-220ENST00000608988 PIK3CD-AS1Q5SR53 167 aa16.47■□□□□ 0.23
SHANK2-220ENST00000608988 ICOSQ9Y6W8 199 aa16.47■□□□□ 0.23
SHANK2-220ENST00000608988 HRNRQ86YZ3 2850 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-220ENST00000608988 IGF2RP11717 2491 aa16.47■□□□□ 0.23
SHANK2-220ENST00000608988 PTPRQQ9UMZ3 2332 aa16.47■□□□□ 0.23
SHANK2-220ENST00000608988 IGHV3-64A0A075B6Q5 118 aa16.46■□□□□ 0.23
SHANK2-220ENST00000608988 TINCRA0A1B0GVN0 87 aa16.46■□□□□ 0.23
SHANK2-220ENST00000608988 IGHV4-38-2P0DP08 117 aa16.46■□□□□ 0.23
SHANK2-220ENST00000608988 NCOR2Q9Y618 2525 aa16.46■□□□□ 0.23
SHANK2-220ENST00000608988 IFITM1P13164 125 aa16.45■□□□□ 0.22
SHANK2-220ENST00000608988 NDUFV3P56181 108 aaKnown RBP16.45■□□□□ 0.22
SHANK2-220ENST00000608988 LRBAP50851 2863 aa16.45■□□□□ 0.22
SHANK2-220ENST00000608988 ATMQ13315 3056 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 TRAV12-2A0A075B6T6 113 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 ELANEP08246 267 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 PSMB8P28062 276 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 FAM240AA0A1B0GVK7 77 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 EDN2P20800 178 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 C2orf82Q6UX34 121 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 VSIG2Q96IQ7 327 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 SPXQ9BT56 116 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 NDUFA12Q9UI09 145 aa16.44■□□□□ 0.22
SHANK2-220ENST00000608988 DEFB121Q5J5C9 76 aa16.43■□□□□ 0.22
SHANK2-220ENST00000608988 IGHV4-61A0A0C4DH41 118 aa16.42■□□□□ 0.22
SHANK2-220ENST00000608988 NHLRC4P0CG21 123 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-220ENST00000608988 SPINK13Q1W4C9 94 aa16.42■□□□□ 0.22
SHANK2-220ENST00000608988 TTC32Q5I0X7 151 aa16.42■□□□□ 0.22
SHANK2-220ENST00000608988 FAM104AQ969W3 186 aa16.42■□□□□ 0.22
SHANK2-220ENST00000608988 C10orf105Q8TEF2 133 aa16.41■□□□□ 0.22
SHANK2-220ENST00000608988 TNFRSF18Q9Y5U5 241 aa16.41■□□□□ 0.22
SHANK2-220ENST00000608988 TRAV4A0A0B4J268 109 aa16.4■□□□□ 0.22
SHANK2-220ENST00000608988 TEX49A0A1B0GTD5 131 aa16.4■□□□□ 0.22
SHANK2-220ENST00000608988 H7C423 109 aa16.4■□□□□ 0.22
SHANK2-220ENST00000608988 PRSS2P07478 247 aa16.4■□□□□ 0.22
SHANK2-220ENST00000608988 IGKV3-20P01619 116 aa16.39■□□□□ 0.22
SHANK2-220ENST00000608988 BEX4Q9NWD9 120 aaPredicted RBP16.39■□□□□ 0.22
SHANK2-220ENST00000608988 LST1O00453 97 aa16.39■□□□□ 0.21
SHANK2-220ENST00000608988 CHD8Q9HCK8 2581 aa16.38■□□□□ 0.21
SHANK2-220ENST00000608988 CACNA1BQ00975 2339 aa16.38■□□□□ 0.21
SHANK2-220ENST00000608988 GATA3P23771 443 aa16.38■□□□□ 0.21
SHANK2-220ENST00000608988 TMEM61Q8N0U2 210 aa16.38■□□□□ 0.21
SHANK2-220ENST00000608988 C15orf53Q8NAA6 179 aa16.38■□□□□ 0.21
SHANK2-220ENST00000608988 GAGE12JA6NER3 117 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 GAGE7O76087 117 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 GAGE12FP0CL80 117 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 GAGE12GP0CL81 117 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 GAGE12IP0CL82 117 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 GAGE4Q13068 117 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 ADAMTSL4-AS1Q5T5F5 129 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 A8MTW9 85 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 DNAJC30Q96LL9 226 aa16.37■□□□□ 0.21
SHANK2-220ENST00000608988 TRAV8-3A0A0A6YYJ7 113 aa16.36■□□□□ 0.21
SHANK2-220ENST00000608988 CRLF1O75462 422 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms