RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 URGCP-MRPS24S4R325 110 aa12.97□□□□□ -0.33
SRSF4-206ENST00000605204 ZNF727A8MUV8 499 aa12.96□□□□□ -0.33
SRSF4-206ENST00000605204 A8MWL6 223 aa12.96□□□□□ -0.33
SRSF4-206ENST00000605204 SSTP61278 116 aa12.96□□□□□ -0.33
SRSF4-206ENST00000605204 DAZ4Q86SG3 579 aaKnown RBP12.96□□□□□ -0.33
SRSF4-206ENST00000605204 NEXN-AS1Q8NBZ9 246 aa12.96□□□□□ -0.33
SRSF4-206ENST00000605204 DAZ3Q9NR90 486 aaKnown RBP12.96□□□□□ -0.33
SRSF4-206ENST00000605204 C16orf90A8MZG2 172 aa12.95□□□□□ -0.34
SRSF4-206ENST00000605204 GATCO43716 136 aaKnown RBP12.95□□□□□ -0.34
SRSF4-206ENST00000605204 SRP19P09132 144 aaKnown RBP12.95□□□□□ -0.34
SRSF4-206ENST00000605204 PKIAP61925 76 aa12.95□□□□□ -0.34
SRSF4-206ENST00000605204 LINC01551Q86U37 167 aa12.95□□□□□ -0.34
SRSF4-206ENST00000605204 DNAJC30Q96LL9 226 aa12.95□□□□□ -0.34
SRSF4-206ENST00000605204 DPH3P1Q9H4G8 78 aa12.95□□□□□ -0.34
SRSF4-206ENST00000605204 IGHV3-30P01768 117 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 IGHV3-33P01772 117 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 IGHV3-30-3P0DP02 117 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 IGHV3-30-5P0DP03 117 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 NTF3P20783 257 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 KCNIP4Q6PIL6 250 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 TRAV8-3A0A0A6YYJ7 113 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 MGPP08493 103 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 PEA15Q15121 130 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 ELOBQ15370 118 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 SMIM15Q7Z3B0 74 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 SPATA12Q7Z6I5 190 aa12.94□□□□□ -0.34
SRSF4-206ENST00000605204 DNAH5Q8TE73 4624 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 M0QY20 66 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 TWIST1Q15672 202 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 CDPF1Q6NVV7 123 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 NIT1Q86X76 327 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 TM2D2Q9BX73 214 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
SRSF4-206ENST00000605204 A0A087WX48 190 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 FAM231BA6NCW3 169 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 PSCAO43653 123 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 FRZBQ92765 325 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 BORCS7Q96B45 105 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 GFRA4Q9GZZ7 299 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 OSTCQ9NRP0 149 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
SRSF4-206ENST00000605204 FOXA3P55318 350 aaPredicted RBP12.91□□□□□ -0.34
SRSF4-206ENST00000605204 SUMO4Q6EEV6 95 aa12.91□□□□□ -0.34
SRSF4-206ENST00000605204 C15orf54Q8N8G6 183 aa12.91□□□□□ -0.34
SRSF4-206ENST00000605204 GTSF1Q8WW33 167 aa12.91□□□□□ -0.34
SRSF4-206ENST00000605204 COX11Q9Y6N1 276 aa12.91□□□□□ -0.34
SRSF4-206ENST00000605204 A0A087WTM6 91 aa12.9□□□□□ -0.34
SRSF4-206ENST00000605204 TMEM241Q24JQ0 296 aa12.9□□□□□ -0.34
SRSF4-206ENST00000605204 RASL11AQ6T310 242 aa12.9□□□□□ -0.34
SRSF4-206ENST00000605204 TSKUQ8WUA8 353 aa12.9□□□□□ -0.34
SRSF4-206ENST00000605204 RMI2Q96E14 147 aa12.9□□□□□ -0.34
SRSF4-206ENST00000605204 Q9HAA7 133 aa12.89□□□□□ -0.35
SRSF4-206ENST00000605204 NIT2Q9NQR4 276 aa12.88□□□□□ -0.35
SRSF4-206ENST00000605204 NAT8Q9UHE5 227 aa12.88□□□□□ -0.35
SRSF4-206ENST00000605204 TRBV25-1A0A075B6N4 114 aa12.87□□□□□ -0.35
SRSF4-206ENST00000605204 RAB14P61106 215 aa12.86□□□□□ -0.35
SRSF4-206ENST00000605204 ISOC2Q96AB3 205 aa12.86□□□□□ -0.35
SRSF4-206ENST00000605204 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
SRSF4-206ENST00000605204 CDK2AP2O75956 126 aa12.85□□□□□ -0.35
SRSF4-206ENST00000605204 KRTAP10-2P60368 255 aa12.85□□□□□ -0.35
SRSF4-206ENST00000605204 IQCJQ1A5X6 159 aa12.85□□□□□ -0.35
SRSF4-206ENST00000605204 Q8N3U1 123 aa12.85□□□□□ -0.35
SRSF4-206ENST00000605204 PGLYRP4Q96LB8 373 aa12.85□□□□□ -0.35
SRSF4-206ENST00000605204 CHCHD5Q9BSY4 110 aa12.85□□□□□ -0.35
SRSF4-206ENST00000605204 IGHV1-24A0A0C4DH33 117 aa12.84□□□□□ -0.35
SRSF4-206ENST00000605204 A0A1B0GUT8 65 aa12.84□□□□□ -0.35
SRSF4-206ENST00000605204 TMEM262E9PQX1 116 aa12.84□□□□□ -0.35
SRSF4-206ENST00000605204 Q0VG73 95 aa12.84□□□□□ -0.35
SRSF4-206ENST00000605204 RPL23P62829 140 aaKnown RBP12.83□□□□□ -0.36
SRSF4-206ENST00000605204 ADIRFQ15847 76 aa12.83□□□□□ -0.36
SRSF4-206ENST00000605204 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
SRSF4-206ENST00000605204 KLK12Q9UKR0 248 aa12.83□□□□□ -0.36
SRSF4-206ENST00000605204 HERC1Q15751 4861 aa12.83□□□□□ -0.36
SRSF4-206ENST00000605204 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
SRSF4-206ENST00000605204 C9JQL5 133 aa12.82□□□□□ -0.36
SRSF4-206ENST00000605204 V9GYV3 84 aa12.82□□□□□ -0.36
SRSF4-206ENST00000605204 NTM-AS1Q6ZSK4 140 aa12.81□□□□□ -0.36
SRSF4-206ENST00000605204 CRPP02741 224 aa12.81□□□□□ -0.36
SRSF4-206ENST00000605204 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
SRSF4-206ENST00000605204 ATRAIDQ6UW56 229 aa12.81□□□□□ -0.36
SRSF4-206ENST00000605204 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
SRSF4-206ENST00000605204 UBE2WQ96B02 151 aa12.81□□□□□ -0.36
SRSF4-206ENST00000605204 TMEM191AQ9H0A3 160 aa12.81□□□□□ -0.36
SRSF4-206ENST00000605204 NAT8BQ9UHF3 227 aa12.81□□□□□ -0.36
SRSF4-206ENST00000605204 RIGQ13278 110 aa12.8□□□□□ -0.36
SRSF4-206ENST00000605204 COTL1Q14019 142 aa12.8□□□□□ -0.36
SRSF4-206ENST00000605204 MPV17L2Q567V2 206 aa12.8□□□□□ -0.36
SRSF4-206ENST00000605204 TMEM243Q9BU79 118 aa12.8□□□□□ -0.36
SRSF4-206ENST00000605204 ANGP03950 147 aaKnown RBP12.79□□□□□ -0.36
SRSF4-206ENST00000605204 Q8N814 137 aa12.79□□□□□ -0.36
SRSF4-206ENST00000605204 MAPKAPK5-AS1Q8N8E1 139 aa12.79□□□□□ -0.36
SRSF4-206ENST00000605204 NCR2O95944 276 aa12.78□□□□□ -0.36
SRSF4-206ENST00000605204 C1orf43Q9BWL3 253 aa12.78□□□□□ -0.36
SRSF4-206ENST00000605204 IGKV2D-24A0A075B6R9 120 aa12.77□□□□□ -0.37
SRSF4-206ENST00000605204 TRAV26-2A0A0B4J265 109 aa12.77□□□□□ -0.37
SRSF4-206ENST00000605204 A0A1B0GW15 77 aa12.77□□□□□ -0.37
SRSF4-206ENST00000605204 MIAQ16674 131 aa12.77□□□□□ -0.37
SRSF4-206ENST00000605204 NUP35Q8NFH5 326 aa12.77□□□□□ -0.37
SRSF4-206ENST00000605204 MRAP2Q96G30 205 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms