RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 LYZL1Q6UWQ5 148 aa11.5□□□□□ -0.57
HERC3-214ENST00000601319 RNASE7Q9H1E1 156 aaKnown RBP11.5□□□□□ -0.57
HERC3-214ENST00000601319 Q9HAA7 133 aa11.5□□□□□ -0.57
HERC3-214ENST00000601319 URGCP-MRPS24S4R325 110 aa11.5□□□□□ -0.57
HERC3-214ENST00000601319 DNAH5Q8TE73 4624 aa11.5□□□□□ -0.57
HERC3-214ENST00000601319 TRBV6-8A0A0A6YYG3 113 aa11.49□□□□□ -0.57
HERC3-214ENST00000601319 TRAV8-3A0A0A6YYJ7 113 aa11.49□□□□□ -0.57
HERC3-214ENST00000601319 LRCOL1A6NCL2 159 aa11.49□□□□□ -0.57
HERC3-214ENST00000601319 H7C1H1 209 aa11.49□□□□□ -0.57
HERC3-214ENST00000601319 SSTP61278 116 aa11.49□□□□□ -0.57
HERC3-214ENST00000601319 FAM231DQ6ZW35 169 aa11.49□□□□□ -0.57
HERC3-214ENST00000601319 DAZ4Q86SG3 579 aaKnown RBP11.49□□□□□ -0.57
HERC3-214ENST00000601319 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
HERC3-214ENST00000601319 DAZ3Q9NR90 486 aaKnown RBP11.49□□□□□ -0.57
HERC3-214ENST00000601319 HSPG2P98160 4391 aa11.49□□□□□ -0.57
HERC3-214ENST00000601319 M0QY20 66 aa11.48□□□□□ -0.57
HERC3-214ENST00000601319 TMEM97Q5BJF2 176 aa11.48□□□□□ -0.57
HERC3-214ENST00000601319 DNAJC30Q96LL9 226 aa11.48□□□□□ -0.57
HERC3-214ENST00000601319 TM2D2Q9BX73 214 aa11.48□□□□□ -0.57
HERC3-214ENST00000601319 EIF5A2Q9GZV4 153 aaKnown RBP11.48□□□□□ -0.57
HERC3-214ENST00000601319 MGPP08493 103 aa11.47□□□□□ -0.57
HERC3-214ENST00000601319 CT83Q5H943 113 aa11.47□□□□□ -0.57
HERC3-214ENST00000601319 DPH3P1Q9H4G8 78 aa11.47□□□□□ -0.57
HERC3-214ENST00000601319 PCLOQ9Y6V0 5065 aa11.46□□□□□ -0.57
HERC3-214ENST00000601319 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.57
HERC3-214ENST00000601319 A0A087WX48 190 aa11.46□□□□□ -0.57
HERC3-214ENST00000601319 NTF3P20783 257 aa11.46□□□□□ -0.57
HERC3-214ENST00000601319 PKIAP61925 76 aa11.46□□□□□ -0.57
HERC3-214ENST00000601319 SUMO4Q6EEV6 95 aa11.46□□□□□ -0.57
HERC3-214ENST00000601319 SMIM7Q9BQ49 75 aa11.46□□□□□ -0.57
HERC3-214ENST00000601319 SRP19P09132 144 aaKnown RBP11.45□□□□□ -0.58
HERC3-214ENST00000601319 CEBPGP53567 150 aa11.45□□□□□ -0.58
HERC3-214ENST00000601319 ELOBQ15370 118 aa11.45□□□□□ -0.58
HERC3-214ENST00000601319 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
HERC3-214ENST00000601319 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
HERC3-214ENST00000601319 A8MWL6 223 aa11.44□□□□□ -0.58
HERC3-214ENST00000601319 KCNIP4Q6PIL6 250 aa11.44□□□□□ -0.58
HERC3-214ENST00000601319 RASL11AQ6T310 242 aa11.44□□□□□ -0.58
HERC3-214ENST00000601319 TEX261Q6UWH6 196 aa11.44□□□□□ -0.58
HERC3-214ENST00000601319 LINC01551Q86U37 167 aa11.44□□□□□ -0.58
HERC3-214ENST00000601319 NTN5Q8WTR8 489 aaPredicted RBP11.44□□□□□ -0.58
HERC3-214ENST00000601319 RMI2Q96E14 147 aa11.44□□□□□ -0.58
HERC3-214ENST00000601319 ZNF727A8MUV8 499 aa11.43□□□□□ -0.58
HERC3-214ENST00000601319 GATCO43716 136 aaKnown RBP11.43□□□□□ -0.58
HERC3-214ENST00000601319 TWIST1Q15672 202 aa11.43□□□□□ -0.58
HERC3-214ENST00000601319 ATRAIDQ6UW56 229 aa11.43□□□□□ -0.58
HERC3-214ENST00000601319 NTM-AS1Q6ZSK4 140 aa11.43□□□□□ -0.58
HERC3-214ENST00000601319 Q8N814 137 aa11.43□□□□□ -0.58
HERC3-214ENST00000601319 FRZBQ92765 325 aa11.42□□□□□ -0.58
HERC3-214ENST00000601319 KLK12Q9UKR0 248 aa11.42□□□□□ -0.58
HERC3-214ENST00000601319 FUSP35637 526 aaKnown RBP eCLIP11.41□□□□□ -0.58
HERC3-214ENST00000601319 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
HERC3-214ENST00000601319 IQCJQ1A5X6 159 aa11.41□□□□□ -0.58
HERC3-214ENST00000601319 FAM74A3Q4VXF1 159 aa11.41□□□□□ -0.58
HERC3-214ENST00000601319 MPV17L2Q567V2 206 aa11.41□□□□□ -0.58
HERC3-214ENST00000601319 PGLYRP4Q96LB8 373 aa11.41□□□□□ -0.58
HERC3-214ENST00000601319 CHCHD5Q9BSY4 110 aa11.41□□□□□ -0.58
HERC3-214ENST00000601319 NIT2Q9NQR4 276 aa11.41□□□□□ -0.58
HERC3-214ENST00000601319 TRBV25-1A0A075B6N4 114 aa11.4□□□□□ -0.58
HERC3-214ENST00000601319 Q0VG73 95 aa11.4□□□□□ -0.58
HERC3-214ENST00000601319 GFRA4Q9GZZ7 299 aa11.4□□□□□ -0.58
HERC3-214ENST00000601319 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
HERC3-214ENST00000601319 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
HERC3-214ENST00000601319 FAM231BA6NCW3 169 aa11.39□□□□□ -0.59
HERC3-214ENST00000601319 SMIM15Q7Z3B0 74 aa11.39□□□□□ -0.59
HERC3-214ENST00000601319 MAPKAPK5-AS1Q8N8E1 139 aa11.39□□□□□ -0.59
HERC3-214ENST00000601319 UBE2WQ96B02 151 aa11.39□□□□□ -0.59
HERC3-214ENST00000601319 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
HERC3-214ENST00000601319 IGLV5-52A0A0A0MRZ9 124 aa11.38□□□□□ -0.59
HERC3-214ENST00000601319 TMEM262E9PQX1 116 aa11.38□□□□□ -0.59
HERC3-214ENST00000601319 GCSHP23434 173 aa11.38□□□□□ -0.59
HERC3-214ENST00000601319 TSKUQ8WUA8 353 aa11.38□□□□□ -0.59
HERC3-214ENST00000601319 IGKV2D-24A0A075B6R9 120 aa11.37□□□□□ -0.59
HERC3-214ENST00000601319 KRTAP10-1P60331 282 aa11.37□□□□□ -0.59
HERC3-214ENST00000601319 WFDC2Q14508 124 aa11.37□□□□□ -0.59
HERC3-214ENST00000601319 GATD1Q8NB37 220 aa11.37□□□□□ -0.59
HERC3-214ENST00000601319 HIGD1CA8MV81 97 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 LCE2BO14633 110 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 CRPP02741 224 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 ANGP03950 147 aaKnown RBP11.36□□□□□ -0.59
HERC3-214ENST00000601319 TMEM241Q24JQ0 296 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 C15orf54Q8N8G6 183 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 Q8N976 141 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 ISOC2Q96AB3 205 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 BORCS7Q96B45 105 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 PRR34Q9NV39 138 aa11.36□□□□□ -0.59
HERC3-214ENST00000601319 A0A1B0GUT8 65 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 C9JQL5 133 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 RBX1P62877 108 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 PEA15Q15121 130 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 MIAQ16674 131 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 Q8N1X5 172 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 V9GYV3 84 aa11.35□□□□□ -0.59
HERC3-214ENST00000601319 TRAV26-2A0A0B4J265 109 aa11.34□□□□□ -0.59
HERC3-214ENST00000601319 RPL23P62829 140 aaKnown RBP11.34□□□□□ -0.59
HERC3-214ENST00000601319 TMEM243Q9BU79 118 aa11.34□□□□□ -0.59
HERC3-214ENST00000601319 TMEM70Q9BUB7 260 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms