RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 LINC01556Q5JQF7 62 aa11.53□□□□□ -0.56
SSBP4-207ENST00000600244 RPP21Q9H633 154 aaKnown RBP11.53□□□□□ -0.56
SSBP4-207ENST00000600244 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.52□□□□□ -0.57
SSBP4-207ENST00000600244 H3BVH4 76 aa11.52□□□□□ -0.57
SSBP4-207ENST00000600244 OR5AL1P0C617 328 aa11.52□□□□□ -0.57
SSBP4-207ENST00000600244 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
SSBP4-207ENST00000600244 GYPEP15421 78 aa11.52□□□□□ -0.57
SSBP4-207ENST00000600244 PIK3CD-AS1Q5SR53 167 aa11.52□□□□□ -0.57
SSBP4-207ENST00000600244 C10orf91Q5T1B1 145 aa11.52□□□□□ -0.57
SSBP4-207ENST00000600244 MRPL16Q9NX20 251 aaKnown RBP11.52□□□□□ -0.57
SSBP4-207ENST00000600244 GZMBP10144 247 aa11.51□□□□□ -0.57
SSBP4-207ENST00000600244 S100A4P26447 101 aaKnown RBP11.51□□□□□ -0.57
SSBP4-207ENST00000600244 ADIRFQ15847 76 aa11.51□□□□□ -0.57
SSBP4-207ENST00000600244 CT83Q5H943 113 aa11.51□□□□□ -0.57
SSBP4-207ENST00000600244 Q6ZRU5 148 aa11.51□□□□□ -0.57
SSBP4-207ENST00000600244 SEC11CQ9BY50 192 aa11.51□□□□□ -0.57
SSBP4-207ENST00000600244 GATCO43716 136 aaKnown RBP11.5□□□□□ -0.57
SSBP4-207ENST00000600244 PNRC1Q12796 327 aaPredicted RBP11.5□□□□□ -0.57
SSBP4-207ENST00000600244 SFRP2Q96HF1 295 aa11.5□□□□□ -0.57
SSBP4-207ENST00000600244 V9GYV3 84 aa11.5□□□□□ -0.57
SSBP4-207ENST00000600244 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
SSBP4-207ENST00000600244 LECT2O14960 151 aa11.49□□□□□ -0.57
SSBP4-207ENST00000600244 GTSF1Q8WW33 167 aa11.49□□□□□ -0.57
SSBP4-207ENST00000600244 TM2D2Q9BX73 214 aa11.49□□□□□ -0.57
SSBP4-207ENST00000600244 F8W036 122 aa11.48□□□□□ -0.57
SSBP4-207ENST00000600244 FOXA3P55318 350 aaPredicted RBP11.48□□□□□ -0.57
SSBP4-207ENST00000600244 ZNF876PQ49A33 203 aa11.48□□□□□ -0.57
SSBP4-207ENST00000600244 DMRTA1Q5VZB9 504 aa11.48□□□□□ -0.57
SSBP4-207ENST00000600244 FER1L6-AS1Q8NA97 138 aa11.48□□□□□ -0.57
SSBP4-207ENST00000600244 OR10G8Q8NGN5 311 aa11.48□□□□□ -0.57
SSBP4-207ENST00000600244 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
SSBP4-207ENST00000600244 A8MWL6 223 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 CTRLP40313 264 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 TIRAPP58753 221 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 C15orf54Q8N8G6 183 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 OR10AG1Q8NH19 301 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 PHLDA3Q9Y5J5 127 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 FAT4Q6V0I7 4981 aa11.47□□□□□ -0.57
SSBP4-207ENST00000600244 FAM231BA6NCW3 169 aa11.46□□□□□ -0.57
SSBP4-207ENST00000600244 F2Z2F3 143 aa11.46□□□□□ -0.57
SSBP4-207ENST00000600244 WDR73Q6P4I2 378 aa11.46□□□□□ -0.57
SSBP4-207ENST00000600244 ZFP82Q8N141 532 aa11.46□□□□□ -0.57
SSBP4-207ENST00000600244 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
SSBP4-207ENST00000600244 GFRA4Q9GZZ7 299 aa11.46□□□□□ -0.57
SSBP4-207ENST00000600244 TRAV4A0A0B4J268 109 aa11.45□□□□□ -0.58
SSBP4-207ENST00000600244 TRGV4A0A0C4DH28 118 aa11.45□□□□□ -0.58
SSBP4-207ENST00000600244 CFAP126Q5VTH2 177 aa11.45□□□□□ -0.58
SSBP4-207ENST00000600244 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
SSBP4-207ENST00000600244 LAGE3Q14657 143 aa11.44□□□□□ -0.58
SSBP4-207ENST00000600244 UFSP1Q6NVU6 142 aa11.44□□□□□ -0.58
SSBP4-207ENST00000600244 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
SSBP4-207ENST00000600244 ZNF479Q96JC4 524 aa11.44□□□□□ -0.58
SSBP4-207ENST00000600244 A8MWV9 139 aa11.43□□□□□ -0.58
SSBP4-207ENST00000600244 M0R381 172 aa11.43□□□□□ -0.58
SSBP4-207ENST00000600244 CACNG7P62955 275 aa11.43□□□□□ -0.58
SSBP4-207ENST00000600244 LELP1Q5T871 98 aa11.43□□□□□ -0.58
SSBP4-207ENST00000600244 JPT2Q9H910 190 aa11.43□□□□□ -0.58
SSBP4-207ENST00000600244 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 MUC21A0A140T8X8 626 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 SMIM27A0A1W2PRY6 76 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 PPP1R2P9O14990 202 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 CIDEAO60543 219 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 ODF1Q14990 250 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 NDUFA5Q16718 116 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 OR4C5Q8NGB2 326 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 ANAPC16Q96DE5 110 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 SAMD10Q9BYL1 202 aa11.42□□□□□ -0.58
SSBP4-207ENST00000600244 HIGD1CA8MV81 97 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 IGHV3-30P01768 117 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 IGHV3-33P01772 117 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 MT-ND4LP03901 98 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 IGHV3-30-5P0DP03 117 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 ZFP2Q6ZN57 461 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 BAALCQ8WXS3 180 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 TPPP3Q9BW30 176 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 KIF25-AS1Q9Y6Z4 181 aa11.41□□□□□ -0.58
SSBP4-207ENST00000600244 NTF3P20783 257 aa11.4□□□□□ -0.58
SSBP4-207ENST00000600244 SH2D6Q7Z4S9 175 aa11.4□□□□□ -0.58
SSBP4-207ENST00000600244 NUP35Q8NFH5 326 aa11.4□□□□□ -0.58
SSBP4-207ENST00000600244 TRAV8-6A0A0B4J262 113 aa11.39□□□□□ -0.59
SSBP4-207ENST00000600244 LOC100131303A0A0U1RQF7 123 aa11.39□□□□□ -0.59
SSBP4-207ENST00000600244 GATA1P15976 413 aaPredicted RBP11.39□□□□□ -0.59
SSBP4-207ENST00000600244 Q8N976 141 aa11.39□□□□□ -0.59
SSBP4-207ENST00000600244 PGLYRP4Q96LB8 373 aa11.39□□□□□ -0.59
SSBP4-207ENST00000600244 RHODO00212 210 aa11.38□□□□□ -0.59
SSBP4-207ENST00000600244 CLRN3Q8NCR9 226 aa11.38□□□□□ -0.59
SSBP4-207ENST00000600244 NAT8BQ9UHF3 227 aa11.38□□□□□ -0.59
SSBP4-207ENST00000600244 A0A1B0GUT8 65 aa11.37□□□□□ -0.59
SSBP4-207ENST00000600244 SSTP61278 116 aa11.37□□□□□ -0.59
SSBP4-207ENST00000600244 AP1S3Q96PC3 154 aa11.37□□□□□ -0.59
SSBP4-207ENST00000600244 CTDSP1Q9GZU7 261 aa11.37□□□□□ -0.59
SSBP4-207ENST00000600244 LPAP08519 4548 aa11.36□□□□□ -0.59
SSBP4-207ENST00000600244 MUC2Q02817 5179 aa11.36□□□□□ -0.59
SSBP4-207ENST00000600244 A0A087WWC5 75 aa11.36□□□□□ -0.59
SSBP4-207ENST00000600244 A0A087WWL8 130 aa11.36□□□□□ -0.59
SSBP4-207ENST00000600244 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
SSBP4-207ENST00000600244 C7orf77A4D0Y5 90 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms