RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 ZNF56Q15929 161 aa11.87□□□□□ -0.51
USHBP1-209ENST00000598570 FRZBQ92765 325 aa11.87□□□□□ -0.51
USHBP1-209ENST00000598570 TPPP3Q9BW30 176 aa11.87□□□□□ -0.51
USHBP1-209ENST00000598570 V9GYV3 84 aa11.87□□□□□ -0.51
USHBP1-209ENST00000598570 LAGE3Q14657 143 aa11.86□□□□□ -0.51
USHBP1-209ENST00000598570 OR10J3Q5JRS4 329 aa11.86□□□□□ -0.51
USHBP1-209ENST00000598570 DPH3P1Q9H4G8 78 aa11.86□□□□□ -0.51
USHBP1-209ENST00000598570 NAT8Q9UHE5 227 aa11.86□□□□□ -0.51
USHBP1-209ENST00000598570 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
USHBP1-209ENST00000598570 IFITM2Q01629 132 aa11.85□□□□□ -0.51
USHBP1-209ENST00000598570 CLLU1Q5K131 121 aa11.85□□□□□ -0.51
USHBP1-209ENST00000598570 SUMO4Q6EEV6 95 aa11.85□□□□□ -0.51
USHBP1-209ENST00000598570 DAZ4Q86SG3 579 aaKnown RBP11.85□□□□□ -0.51
USHBP1-209ENST00000598570 NIT1Q86X76 327 aa11.85□□□□□ -0.51
USHBP1-209ENST00000598570 CHCHD7Q9BUK0 85 aa11.85□□□□□ -0.51
USHBP1-209ENST00000598570 DAZ3Q9NR90 486 aaKnown RBP11.85□□□□□ -0.51
USHBP1-209ENST00000598570 DYNC1H1Q14204 4646 aaKnown RBP11.85□□□□□ -0.51
USHBP1-209ENST00000598570 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
USHBP1-209ENST00000598570 F5H697 171 aa11.84□□□□□ -0.51
USHBP1-209ENST00000598570 H7C1H1 209 aa11.84□□□□□ -0.51
USHBP1-209ENST00000598570 SSTP61278 116 aa11.84□□□□□ -0.51
USHBP1-209ENST00000598570 TWIST1Q15672 202 aa11.84□□□□□ -0.51
USHBP1-209ENST00000598570 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
USHBP1-209ENST00000598570 RASL11AQ6T310 242 aa11.83□□□□□ -0.52
USHBP1-209ENST00000598570 NTM-AS1Q6ZSK4 140 aa11.83□□□□□ -0.52
USHBP1-209ENST00000598570 C15orf54Q8N8G6 183 aa11.82□□□□□ -0.52
USHBP1-209ENST00000598570 NIT2Q9NQR4 276 aa11.82□□□□□ -0.52
USHBP1-209ENST00000598570 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
USHBP1-209ENST00000598570 SMIM27A0A1W2PRY6 76 aa11.81□□□□□ -0.52
USHBP1-209ENST00000598570 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
USHBP1-209ENST00000598570 RAB14P61106 215 aa11.81□□□□□ -0.52
USHBP1-209ENST00000598570 Q8N3U1 123 aa11.81□□□□□ -0.52
USHBP1-209ENST00000598570 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
USHBP1-209ENST00000598570 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
USHBP1-209ENST00000598570 IQCJQ1A5X6 159 aa11.8□□□□□ -0.52
USHBP1-209ENST00000598570 GATD1Q8NB37 220 aa11.8□□□□□ -0.52
USHBP1-209ENST00000598570 ATRAIDQ6UW56 229 aa11.79□□□□□ -0.52
USHBP1-209ENST00000598570 NUP35Q8NFH5 326 aa11.79□□□□□ -0.52
USHBP1-209ENST00000598570 TMEM191AQ9H0A3 160 aa11.79□□□□□ -0.52
USHBP1-209ENST00000598570 HERC2O95714 4834 aa11.79□□□□□ -0.52
USHBP1-209ENST00000598570 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
USHBP1-209ENST00000598570 IGHV3-30P01768 117 aa11.78□□□□□ -0.52
USHBP1-209ENST00000598570 IGHV3-33P01772 117 aa11.78□□□□□ -0.52
USHBP1-209ENST00000598570 MGPP08493 103 aa11.78□□□□□ -0.52
USHBP1-209ENST00000598570 IGHV3-30-3P0DP02 117 aa11.78□□□□□ -0.52
USHBP1-209ENST00000598570 IGHV3-30-5P0DP03 117 aa11.78□□□□□ -0.52
USHBP1-209ENST00000598570 A0A087WTM6 91 aa11.77□□□□□ -0.53
USHBP1-209ENST00000598570 TRAV8-3A0A0A6YYJ7 113 aa11.77□□□□□ -0.53
USHBP1-209ENST00000598570 ADIRFQ15847 76 aa11.77□□□□□ -0.53
USHBP1-209ENST00000598570 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.53
USHBP1-209ENST00000598570 NAT8BQ9UHF3 227 aa11.77□□□□□ -0.53
USHBP1-209ENST00000598570 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
USHBP1-209ENST00000598570 KRTAP10-2P60368 255 aa11.76□□□□□ -0.53
USHBP1-209ENST00000598570 PKIAP61925 76 aa11.76□□□□□ -0.53
USHBP1-209ENST00000598570 RNF185Q96GF1 192 aa11.76□□□□□ -0.53
USHBP1-209ENST00000598570 SMIM15Q7Z3B0 74 aa11.75□□□□□ -0.53
USHBP1-209ENST00000598570 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
USHBP1-209ENST00000598570 RAB4AP20338 218 aa11.74□□□□□ -0.53
USHBP1-209ENST00000598570 ELOBQ15370 118 aa11.74□□□□□ -0.53
USHBP1-209ENST00000598570 BORCS7Q96B45 105 aa11.74□□□□□ -0.53
USHBP1-209ENST00000598570 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
USHBP1-209ENST00000598570 PNRC1Q12796 327 aaPredicted RBP11.73□□□□□ -0.53
USHBP1-209ENST00000598570 RIGQ13278 110 aa11.73□□□□□ -0.53
USHBP1-209ENST00000598570 UQCC3Q6UW78 93 aa11.73□□□□□ -0.53
USHBP1-209ENST00000598570 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
USHBP1-209ENST00000598570 TM2D2Q9BX73 214 aa11.73□□□□□ -0.53
USHBP1-209ENST00000598570 PRR34Q9NV39 138 aa11.73□□□□□ -0.53
USHBP1-209ENST00000598570 LRP1BQ9NZR2 4599 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 A0A087WX48 190 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 TRAV26-2A0A0B4J265 109 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 A0A1B0GW15 77 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 CDPF1Q6NVV7 123 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 MAPKAPK5-AS1Q8N8E1 139 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 MRAP2Q96G30 205 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 COX11Q9Y6N1 276 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 RYR1P21817 5038 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 DNAH5Q8TE73 4624 aa11.72□□□□□ -0.53
USHBP1-209ENST00000598570 A0A1B0GXF2 115 aa11.71□□□□□ -0.53
USHBP1-209ENST00000598570 MPV17L2Q567V2 206 aa11.71□□□□□ -0.53
USHBP1-209ENST00000598570 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.53
USHBP1-209ENST00000598570 ENHOQ6UWT2 76 aa11.71□□□□□ -0.53
USHBP1-209ENST00000598570 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
USHBP1-209ENST00000598570 PPP1R2P9O14990 202 aa11.7□□□□□ -0.54
USHBP1-209ENST00000598570 GAS8-AS1O95177 125 aa11.7□□□□□ -0.54
USHBP1-209ENST00000598570 NCR2O95944 276 aa11.7□□□□□ -0.54
USHBP1-209ENST00000598570 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
USHBP1-209ENST00000598570 Q0VG73 95 aa11.7□□□□□ -0.54
USHBP1-209ENST00000598570 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
USHBP1-209ENST00000598570 C16orf90A8MZG2 172 aa11.69□□□□□ -0.54
USHBP1-209ENST00000598570 RBX1P62877 108 aa11.69□□□□□ -0.54
USHBP1-209ENST00000598570 CHCHD5Q9BSY4 110 aa11.69□□□□□ -0.54
USHBP1-209ENST00000598570 TRBV27A0A0K0K1C4 114 aa11.68□□□□□ -0.54
USHBP1-209ENST00000598570 EREGO14944 169 aa11.68□□□□□ -0.54
USHBP1-209ENST00000598570 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
USHBP1-209ENST00000598570 FAM104BQ5XKR9 115 aa11.68□□□□□ -0.54
USHBP1-209ENST00000598570 AMN1Q8IY45 258 aa11.68□□□□□ -0.54
USHBP1-209ENST00000598570 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms