RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 SPATA12Q7Z6I5 190 aa15.32■□□□□ 0.04
IRF3-220ENST00000598108 LRP1BQ9NZR2 4599 aa15.31■□□□□ 0.04
IRF3-220ENST00000598108 KRTAP10-2P60368 255 aa15.31■□□□□ 0.04
IRF3-220ENST00000598108 TWIST1Q15672 202 aa15.31■□□□□ 0.04
IRF3-220ENST00000598108 SUMO4Q6EEV6 95 aa15.31■□□□□ 0.04
IRF3-220ENST00000598108 A8MWL6 223 aa15.3■□□□□ 0.04
IRF3-220ENST00000598108 TRGC1P0CF51 173 aa15.3■□□□□ 0.04
IRF3-220ENST00000598108 DAZ4Q86SG3 579 aaKnown RBP15.3■□□□□ 0.04
IRF3-220ENST00000598108 DAZ3Q9NR90 486 aaKnown RBP15.3■□□□□ 0.04
IRF3-220ENST00000598108 PEA15Q15121 130 aa15.29■□□□□ 0.04
IRF3-220ENST00000598108 NIT1Q86X76 327 aa15.29■□□□□ 0.04
IRF3-220ENST00000598108 PGLYRP4Q96LB8 373 aa15.29■□□□□ 0.04
IRF3-220ENST00000598108 DPH3P1Q9H4G8 78 aa15.29■□□□□ 0.04
IRF3-220ENST00000598108 Q9HAA7 133 aa15.29■□□□□ 0.04
IRF3-220ENST00000598108 C16orf90A8MZG2 172 aa15.28■□□□□ 0.04
IRF3-220ENST00000598108 FOXA3P55318 350 aaPredicted RBP15.28■□□□□ 0.04
IRF3-220ENST00000598108 TMEM241Q24JQ0 296 aa15.28■□□□□ 0.04
IRF3-220ENST00000598108 CT83Q5H943 113 aa15.28■□□□□ 0.04
IRF3-220ENST00000598108 TRBV6-8A0A0A6YYG3 113 aa15.27■□□□□ 0.04
IRF3-220ENST00000598108 FAM74A3Q4VXF1 159 aa15.27■□□□□ 0.04
IRF3-220ENST00000598108 OSTCQ9NRP0 149 aa15.27■□□□□ 0.04
IRF3-220ENST00000598108 DNAH5Q8TE73 4624 aa15.27■□□□□ 0.03
IRF3-220ENST00000598108 A0A087WTM6 91 aa15.26■□□□□ 0.03
IRF3-220ENST00000598108 FUSP35637 526 aaKnown RBP eCLIP15.26■□□□□ 0.03
IRF3-220ENST00000598108 RPL23P62829 140 aaKnown RBP15.26■□□□□ 0.03
IRF3-220ENST00000598108 NTM-AS1Q6ZSK4 140 aa15.26■□□□□ 0.03
IRF3-220ENST00000598108 TSKUQ8WUA8 353 aa15.25■□□□□ 0.03
IRF3-220ENST00000598108 ISOC2Q96AB3 205 aa15.25■□□□□ 0.03
IRF3-220ENST00000598108 H7C1H1 209 aa15.24■□□□□ 0.03
IRF3-220ENST00000598108 LAGE3Q14657 143 aa15.24■□□□□ 0.03
IRF3-220ENST00000598108 RASL11AQ6T310 242 aa15.24■□□□□ 0.03
IRF3-220ENST00000598108 DNAJC30Q96LL9 226 aa15.24■□□□□ 0.03
IRF3-220ENST00000598108 SMDT1Q9H4I9 107 aa15.24■□□□□ 0.03
IRF3-220ENST00000598108 V9GYV3 84 aa15.24■□□□□ 0.03
IRF3-220ENST00000598108 NAT8Q9UHE5 227 aa15.23■□□□□ 0.03
IRF3-220ENST00000598108 URGCP-MRPS24S4R325 110 aa15.23■□□□□ 0.03
IRF3-220ENST00000598108 HIGD1CA8MV81 97 aa15.22■□□□□ 0.03
IRF3-220ENST00000598108 GATD1Q8NB37 220 aa15.22■□□□□ 0.03
IRF3-220ENST00000598108 RYR1P21817 5038 aa15.22■□□□□ 0.03
IRF3-220ENST00000598108 TRAV26-2A0A0B4J265 109 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 LRCOL1A6NCL2 159 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 TMEM262E9PQX1 116 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 ADIRFQ15847 76 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 C15orf54Q8N8G6 183 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.21■□□□□ 0.03
IRF3-220ENST00000598108 GFRA4Q9GZZ7 299 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 NIT2Q9NQR4 276 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 KLK12Q9UKR0 248 aa15.21■□□□□ 0.03
IRF3-220ENST00000598108 A0A087WX48 190 aa15.2■□□□□ 0.02
IRF3-220ENST00000598108 PSCAO43653 123 aa15.2■□□□□ 0.02
IRF3-220ENST00000598108 TRAV8-3A0A0A6YYJ7 113 aa15.19■□□□□ 0.02
IRF3-220ENST00000598108 FAM231BA6NCW3 169 aa15.19■□□□□ 0.02
IRF3-220ENST00000598108 EREGO14944 169 aa15.19■□□□□ 0.02
IRF3-220ENST00000598108 CHCHD5Q9BSY4 110 aa15.19■□□□□ 0.02
IRF3-220ENST00000598108 CHCHD7Q9BUK0 85 aa15.19■□□□□ 0.02
IRF3-220ENST00000598108 A0A1B0GUT8 65 aa15.18■□□□□ 0.02
IRF3-220ENST00000598108 TMEM97Q5BJF2 176 aa15.18■□□□□ 0.02
IRF3-220ENST00000598108 SMIM15Q7Z3B0 74 aa15.18■□□□□ 0.02
IRF3-220ENST00000598108 DEFB104AQ8WTQ1 72 aa15.18■□□□□ 0.02
IRF3-220ENST00000598108 PGPEP1Q9NXJ5 209 aa15.18■□□□□ 0.02
IRF3-220ENST00000598108 MPV17L2Q567V2 206 aa15.17■□□□□ 0.02
IRF3-220ENST00000598108 NUP35Q8NFH5 326 aa15.17■□□□□ 0.02
IRF3-220ENST00000598108 HSPG2P98160 4391 aa15.16■□□□□ 0.02
IRF3-220ENST00000598108 RAB14P61106 215 aa15.16■□□□□ 0.02
IRF3-220ENST00000598108 IQCJQ1A5X6 159 aa15.16■□□□□ 0.02
IRF3-220ENST00000598108 KCNIP4Q6PIL6 250 aa15.16■□□□□ 0.02
IRF3-220ENST00000598108 MAPKAPK5-AS1Q8N8E1 139 aa15.16■□□□□ 0.02
IRF3-220ENST00000598108 BORCS7Q96B45 105 aa15.16■□□□□ 0.02
IRF3-220ENST00000598108 RPL39LQ96EH5 51 aaKnown RBP15.16■□□□□ 0.02
IRF3-220ENST00000598108 TM2D2Q9BX73 214 aa15.16■□□□□ 0.02
IRF3-220ENST00000598108 APOBP04114 4563 aaKnown RBP15.15■□□□□ 0.02
IRF3-220ENST00000598108 GAGE6Q13070 117 aa15.15■□□□□ 0.02
IRF3-220ENST00000598108 ATRAIDQ6UW56 229 aa15.15■□□□□ 0.02
IRF3-220ENST00000598108 Q8N976 141 aa15.15■□□□□ 0.02
IRF3-220ENST00000598108 UBE2WQ96B02 151 aa15.15■□□□□ 0.02
IRF3-220ENST00000598108 TRBV25-1A0A075B6N4 114 aa15.14■□□□□ 0.01
IRF3-220ENST00000598108 IGHV1-24A0A0C4DH33 117 aa15.14■□□□□ 0.01
IRF3-220ENST00000598108 GAS8-AS1O95177 125 aa15.14■□□□□ 0.01
IRF3-220ENST00000598108 IFITM2Q01629 132 aa15.14■□□□□ 0.01
IRF3-220ENST00000598108 WFDC2Q14508 124 aa15.14■□□□□ 0.01
IRF3-220ENST00000598108 ELOBQ15370 118 aa15.14■□□□□ 0.01
IRF3-220ENST00000598108 ENHOQ6UWT2 76 aa15.13■□□□□ 0.01
IRF3-220ENST00000598108 FRZBQ92765 325 aa15.13■□□□□ 0.01
IRF3-220ENST00000598108 RNF185Q96GF1 192 aa15.13■□□□□ 0.01
IRF3-220ENST00000598108 SMIM27A0A1W2PRY6 76 aa15.12■□□□□ 0.01
IRF3-220ENST00000598108 RBX1P62877 108 aa15.12■□□□□ 0.01
IRF3-220ENST00000598108 TMEM191AQ9H0A3 160 aa15.12■□□□□ 0.01
IRF3-220ENST00000598108 ANGP03950 147 aaKnown RBP15.11■□□□□ 0.01
IRF3-220ENST00000598108 CLLU1Q5K131 121 aa15.11■□□□□ 0.01
IRF3-220ENST00000598108 NAT8BQ9UHF3 227 aa15.11■□□□□ 0.01
IRF3-220ENST00000598108 IGKV2D-24A0A075B6R9 120 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 RAB4AP20338 218 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 PKIAP61925 76 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 RIGQ13278 110 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 CDPF1Q6NVV7 123 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 AMN1Q8IY45 258 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 Q8N814 137 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 TMEM243Q9BU79 118 aa15.1■□□□□ 0.01
IRF3-220ENST00000598108 LECT2O14960 151 aa15.09■□□□□ 0.01
IRF3-220ENST00000598108 COTL1Q14019 142 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms