RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 A0A1B0GXF2 115 aa15.29■□□□□ 0.04
CHMP2A-204ENST00000597848 RASL11AQ6T310 242 aa15.29■□□□□ 0.04
CHMP2A-204ENST00000597848 AMN1Q8IY45 258 aa15.29■□□□□ 0.04
CHMP2A-204ENST00000597848 LINC00588Q9Y4M8 146 aa15.29■□□□□ 0.04
CHMP2A-204ENST00000597848 URGCP-MRPS24S4R325 110 aa15.29■□□□□ 0.04
CHMP2A-204ENST00000597848 TRBV7-3A0A075B6L6 115 aa15.28■□□□□ 0.04
CHMP2A-204ENST00000597848 RAB4AP20338 218 aa15.28■□□□□ 0.04
CHMP2A-204ENST00000597848 TNFRSF18Q9Y5U5 241 aa15.28■□□□□ 0.04
CHMP2A-204ENST00000597848 GATD1Q8NB37 220 aa15.27■□□□□ 0.04
CHMP2A-204ENST00000597848 RNF185Q96GF1 192 aa15.27■□□□□ 0.04
CHMP2A-204ENST00000597848 LINC00694P0DN24 101 aa15.26■□□□□ 0.03
CHMP2A-204ENST00000597848 FAM104BQ5XKR9 115 aa15.26■□□□□ 0.03
CHMP2A-204ENST00000597848 DNAJC30Q96LL9 226 aa15.26■□□□□ 0.03
CHMP2A-204ENST00000597848 NIT2Q9NQR4 276 aa15.26■□□□□ 0.03
CHMP2A-204ENST00000597848 TRAV9-1A0A075B6T8 112 aa15.25■□□□□ 0.03
CHMP2A-204ENST00000597848 UBE2D3P61077 147 aa15.25■□□□□ 0.03
CHMP2A-204ENST00000597848 UBE2D2P62837 147 aa15.25■□□□□ 0.03
CHMP2A-204ENST00000597848 GTSF1LQ9H1H1 148 aa15.25■□□□□ 0.03
CHMP2A-204ENST00000597848 PLECQ15149 4684 aaKnown RBP15.24■□□□□ 0.03
CHMP2A-204ENST00000597848 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.24■□□□□ 0.03
CHMP2A-204ENST00000597848 FRZBQ92765 325 aa15.24■□□□□ 0.03
CHMP2A-204ENST00000597848 MRAP2Q96G30 205 aa15.24■□□□□ 0.03
CHMP2A-204ENST00000597848 MRPS16Q9Y3D3 137 aaKnown RBP15.24■□□□□ 0.03
CHMP2A-204ENST00000597848 ATRAIDQ6UW56 229 aa15.23■□□□□ 0.03
CHMP2A-204ENST00000597848 TIRAPP58753 221 aa15.22■□□□□ 0.03
CHMP2A-204ENST00000597848 MRPL51Q4U2R6 128 aaKnown RBP15.22■□□□□ 0.03
CHMP2A-204ENST00000597848 RPL39LQ96EH5 51 aaKnown RBP15.22■□□□□ 0.03
CHMP2A-204ENST00000597848 IGHV3-38A0A0C4DH36 116 aa15.21■□□□□ 0.03
CHMP2A-204ENST00000597848 SMKR1H3BMG3 65 aa15.21■□□□□ 0.03
CHMP2A-204ENST00000597848 OR10J3Q5JRS4 329 aa15.21■□□□□ 0.03
CHMP2A-204ENST00000597848 GAS8-AS1O95177 125 aa15.2■□□□□ 0.02
CHMP2A-204ENST00000597848 NCR2O95944 276 aa15.2■□□□□ 0.02
CHMP2A-204ENST00000597848 CKS2P33552 79 aa15.19■□□□□ 0.02
CHMP2A-204ENST00000597848 DAZ4Q86SG3 579 aaKnown RBP15.19■□□□□ 0.02
CHMP2A-204ENST00000597848 UPK3BQ9BT76 320 aa15.19■□□□□ 0.02
CHMP2A-204ENST00000597848 DAZ3Q9NR90 486 aaKnown RBP15.19■□□□□ 0.02
CHMP2A-204ENST00000597848 TRAV8-6A0A0B4J262 113 aa15.18■□□□□ 0.02
CHMP2A-204ENST00000597848 LELP1Q5T871 98 aa15.18■□□□□ 0.02
CHMP2A-204ENST00000597848 Q9H8V8 135 aa15.18■□□□□ 0.02
CHMP2A-204ENST00000597848 RPS10P46783 165 aaKnown RBP15.17■□□□□ 0.02
CHMP2A-204ENST00000597848 ST20Q9HBF5 79 aa15.17■□□□□ 0.02
CHMP2A-204ENST00000597848 IGLV2-18A0A075B6J9 118 aa15.16■□□□□ 0.02
CHMP2A-204ENST00000597848 TGIF2-C20orf24A0A0A6YYL0 155 aa15.16■□□□□ 0.02
CHMP2A-204ENST00000597848 D6R8Y8 96 aa15.16■□□□□ 0.02
CHMP2A-204ENST00000597848 PPP1R17O96001 155 aa15.16■□□□□ 0.02
CHMP2A-204ENST00000597848 TMEM136Q6ZRR5 245 aa15.16■□□□□ 0.02
CHMP2A-204ENST00000597848 SIVA1O15304 175 aa15.15■□□□□ 0.02
CHMP2A-204ENST00000597848 ELOBQ15370 118 aa15.15■□□□□ 0.02
CHMP2A-204ENST00000597848 WFDC10BQ8IUB3 73 aa15.15■□□□□ 0.02
CHMP2A-204ENST00000597848 TRBV6-5A0A0K0K1A5 114 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 SDHAF1A6NFY7 115 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 PPBPP02775 128 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 COX19Q49B96 90 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 TMEM97Q5BJF2 176 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 DEFB104AQ8WTQ1 72 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 SMCO4Q9NRQ5 59 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 ALMS1Q8TCU4 4167 aa15.14■□□□□ 0.01
CHMP2A-204ENST00000597848 CBLN2Q8IUK8 224 aa15.13■□□□□ 0.01
CHMP2A-204ENST00000597848 ORMDL3Q8N138 153 aa15.13■□□□□ 0.01
CHMP2A-204ENST00000597848 NRACQ8N912 160 aa15.13■□□□□ 0.01
CHMP2A-204ENST00000597848 GNB1LQ9BYB4 327 aa15.13■□□□□ 0.01
CHMP2A-204ENST00000597848 TRBV6-8A0A0A6YYG3 113 aa15.12■□□□□ 0.01
CHMP2A-204ENST00000597848 M0R2N4 97 aa15.12■□□□□ 0.01
CHMP2A-204ENST00000597848 HLA-DQA1P01909 254 aa15.12■□□□□ 0.01
CHMP2A-204ENST00000597848 PMCHP20382 165 aa15.12■□□□□ 0.01
CHMP2A-204ENST00000597848 TRBV24-1A0A075B6N3 115 aa15.11■□□□□ 0.01
CHMP2A-204ENST00000597848 TNFRSF6BO95407 300 aa15.11■□□□□ 0.01
CHMP2A-204ENST00000597848 APCSP02743 223 aa15.11■□□□□ 0.01
CHMP2A-204ENST00000597848 COTL1Q14019 142 aa15.11■□□□□ 0.01
CHMP2A-204ENST00000597848 NTM-AS1Q6ZSK4 140 aa15.11■□□□□ 0.01
CHMP2A-204ENST00000597848 PRELID3AQ96N28 172 aa15.11■□□□□ 0.01
CHMP2A-204ENST00000597848 I3L3M4 83 aa15.1■□□□□ 0.01
CHMP2A-204ENST00000597848 SUMO2P61956 95 aaKnown RBP15.1■□□□□ 0.01
CHMP2A-204ENST00000597848 TMEM70Q9BUB7 260 aa15.1■□□□□ 0.01
CHMP2A-204ENST00000597848 NPYP01303 97 aa15.09■□□□□ 0.01
CHMP2A-204ENST00000597848 C20orf78Q9BR46 151 aa15.09■□□□□ 0.01
CHMP2A-204ENST00000597848 TRBV25-1A0A075B6N4 114 aa15.08■□□□□ 0
CHMP2A-204ENST00000597848 IGHV1-24A0A0C4DH33 117 aa15.08■□□□□ 0
CHMP2A-204ENST00000597848 NBDYA0A0U1RRE5 68 aa15.08■□□□□ 0
CHMP2A-204ENST00000597848 VCYO14598 125 aa15.08■□□□□ 0
CHMP2A-204ENST00000597848 MT-ND6P03923 174 aa15.08■□□□□ 0
CHMP2A-204ENST00000597848 POLR2KP53803 58 aaKnown RBP15.08■□□□□ 0
CHMP2A-204ENST00000597848 KIAA1644Q3SXP7 199 aa15.08■□□□□ 0
CHMP2A-204ENST00000597848 CHCHD5Q9BSY4 110 aa15.08■□□□□ 0
CHMP2A-204ENST00000597848 PHOX2AO14813 284 aa15.07■□□□□ 0
CHMP2A-204ENST00000597848 FABP9Q0Z7S8 132 aa15.07■□□□□ 0
CHMP2A-204ENST00000597848 YPEL4Q96NS1 127 aa15.07■□□□□ 0
CHMP2A-204ENST00000597848 MRPL18Q9H0U6 180 aaKnown RBP15.07■□□□□ 0
CHMP2A-204ENST00000597848 TRBV27A0A0K0K1C4 114 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 TMEM262E9PQX1 116 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 IGHV3-30P01768 117 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 IGHV3-33P01772 117 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 DNAH10OSP0CZ25 163 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 IGHV3-30-3P0DP02 117 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 IGHV3-30-5P0DP03 117 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 AMTP48728 403 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 IQCJQ1A5X6 159 aa15.06■□□□□ 0
CHMP2A-204ENST00000597848 TRAV9-2A0A087WT02 112 aa15.05■□□□□ -0
CHMP2A-204ENST00000597848 TTC32Q5I0X7 151 aa15.05■□□□□ -0
CHMP2A-204ENST00000597848 TMEM243Q9BU79 118 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms