RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 C16orf90A8MZG2 172 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 C9JQL5 133 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 MGPP08493 103 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 ERVFC1-1P60608 527 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 LAGE3Q14657 143 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 CT83Q5H943 113 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 SUMO4Q6EEV6 95 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 NIT1Q86X76 327 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 DPH3P1Q9H4G8 78 aa14.14□□□□□ -0.15
PNKP-209ENST00000596726 DNAH5Q8TE73 4624 aa14.13□□□□□ -0.15
PNKP-209ENST00000596726 A8MWL6 223 aa14.13□□□□□ -0.15
PNKP-209ENST00000596726 A0A087WTM6 91 aa14.12□□□□□ -0.15
PNKP-209ENST00000596726 TRBV6-8A0A0A6YYG3 113 aa14.12□□□□□ -0.15
PNKP-209ENST00000596726 FOXA3P55318 350 aaPredicted RBP14.12□□□□□ -0.15
PNKP-209ENST00000596726 SRSF3P84103 164 aaKnown RBP14.12□□□□□ -0.15
PNKP-209ENST00000596726 TWIST1Q15672 202 aa14.12□□□□□ -0.15
PNKP-209ENST00000596726 FAM74A3Q4VXF1 159 aa14.12□□□□□ -0.15
PNKP-209ENST00000596726 DAZ4Q86SG3 579 aaKnown RBP14.12□□□□□ -0.15
PNKP-209ENST00000596726 DNAJC30Q96LL9 226 aa14.12□□□□□ -0.15
PNKP-209ENST00000596726 DAZ3Q9NR90 486 aaKnown RBP14.12□□□□□ -0.15
PNKP-209ENST00000596726 H7C1H1 209 aa14.11□□□□□ -0.15
PNKP-209ENST00000596726 SMDT1Q9H4I9 107 aa14.11□□□□□ -0.15
PNKP-209ENST00000596726 OSTCQ9NRP0 149 aa14.11□□□□□ -0.15
PNKP-209ENST00000596726 PEA15Q15121 130 aa14.1□□□□□ -0.15
PNKP-209ENST00000596726 NTM-AS1Q6ZSK4 140 aa14.1□□□□□ -0.15
PNKP-209ENST00000596726 CHCHD7Q9BUK0 85 aa14.1□□□□□ -0.15
PNKP-209ENST00000596726 Q9HAA7 133 aa14.1□□□□□ -0.15
PNKP-209ENST00000596726 EREGO14944 169 aa14.09□□□□□ -0.15
PNKP-209ENST00000596726 TMEM241Q24JQ0 296 aa14.09□□□□□ -0.15
PNKP-209ENST00000596726 RASL11AQ6T310 242 aa14.09□□□□□ -0.15
PNKP-209ENST00000596726 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.09□□□□□ -0.15
PNKP-209ENST00000596726 TMEM97Q5BJF2 176 aa14.08□□□□□ -0.16
PNKP-209ENST00000596726 TSKUQ8WUA8 353 aa14.08□□□□□ -0.16
PNKP-209ENST00000596726 PGLYRP4Q96LB8 373 aa14.08□□□□□ -0.16
PNKP-209ENST00000596726 URGCP-MRPS24S4R325 110 aa14.08□□□□□ -0.16
PNKP-209ENST00000596726 TRAV8-3A0A0A6YYJ7 113 aa14.07□□□□□ -0.16
PNKP-209ENST00000596726 LRCOL1A6NCL2 159 aa14.07□□□□□ -0.16
PNKP-209ENST00000596726 FAM231BA6NCW3 169 aa14.07□□□□□ -0.16
PNKP-209ENST00000596726 RPL23P62829 140 aaKnown RBP14.07□□□□□ -0.16
PNKP-209ENST00000596726 ISOC2Q96AB3 205 aa14.07□□□□□ -0.16
PNKP-209ENST00000596726 GFRA4Q9GZZ7 299 aa14.07□□□□□ -0.16
PNKP-209ENST00000596726 NIT2Q9NQR4 276 aa14.07□□□□□ -0.16
PNKP-209ENST00000596726 PGPEP1Q9NXJ5 209 aa14.07□□□□□ -0.16
PNKP-209ENST00000596726 RYR1P21817 5038 aa14.06□□□□□ -0.16
PNKP-209ENST00000596726 A0A087WX48 190 aa14.06□□□□□ -0.16
PNKP-209ENST00000596726 PSCAO43653 123 aa14.06□□□□□ -0.16
PNKP-209ENST00000596726 NAT8Q9UHE5 227 aa14.06□□□□□ -0.16
PNKP-209ENST00000596726 V9GYV3 84 aa14.06□□□□□ -0.16
PNKP-209ENST00000596726 TM2D2Q9BX73 214 aa14.05□□□□□ -0.16
PNKP-209ENST00000596726 HIGD1CA8MV81 97 aa14.04□□□□□ -0.16
PNKP-209ENST00000596726 ELOBQ15370 118 aa14.04□□□□□ -0.16
PNKP-209ENST00000596726 SMIM15Q7Z3B0 74 aa14.04□□□□□ -0.16
PNKP-209ENST00000596726 C15orf54Q8N8G6 183 aa14.04□□□□□ -0.16
PNKP-209ENST00000596726 GATD1Q8NB37 220 aa14.04□□□□□ -0.16
PNKP-209ENST00000596726 FRZBQ92765 325 aa14.04□□□□□ -0.16
PNKP-209ENST00000596726 KLK12Q9UKR0 248 aa14.04□□□□□ -0.16
PNKP-209ENST00000596726 TMEM262E9PQX1 116 aa14.03□□□□□ -0.16
PNKP-209ENST00000596726 IQCJQ1A5X6 159 aa14.03□□□□□ -0.16
PNKP-209ENST00000596726 CDPF1Q6NVV7 123 aa14.03□□□□□ -0.16
PNKP-209ENST00000596726 KCNIP4Q6PIL6 250 aa14.03□□□□□ -0.16
PNKP-209ENST00000596726 HSPG2P98160 4391 aa14.03□□□□□ -0.16
PNKP-209ENST00000596726 APOBP04114 4563 aaKnown RBP14.02□□□□□ -0.16
PNKP-209ENST00000596726 TRBV25-1A0A075B6N4 114 aa14.02□□□□□ -0.17
PNKP-209ENST00000596726 FUSP35637 526 aaKnown RBP eCLIP14.02□□□□□ -0.17
PNKP-209ENST00000596726 PKIAP61925 76 aa14.02□□□□□ -0.17
PNKP-209ENST00000596726 ADIRFQ15847 76 aa14.02□□□□□ -0.17
PNKP-209ENST00000596726 MPV17L2Q567V2 206 aa14.02□□□□□ -0.17
PNKP-209ENST00000596726 CHCHD5Q9BSY4 110 aa14.02□□□□□ -0.17
PNKP-209ENST00000596726 TRAV26-2A0A0B4J265 109 aa14.01□□□□□ -0.17
PNKP-209ENST00000596726 A0A1B0GUT8 65 aa14.01□□□□□ -0.17
PNKP-209ENST00000596726 CDK2AP2O75956 126 aa14.01□□□□□ -0.17
PNKP-209ENST00000596726 BORCS7Q96B45 105 aa14.01□□□□□ -0.17
PNKP-209ENST00000596726 IGHV1-24A0A0C4DH33 117 aa14□□□□□ -0.17
PNKP-209ENST00000596726 ATRAIDQ6UW56 229 aa14□□□□□ -0.17
PNKP-209ENST00000596726 MAPKAPK5-AS1Q8N8E1 139 aa13.99□□□□□ -0.17
PNKP-209ENST00000596726 NUP35Q8NFH5 326 aa13.99□□□□□ -0.17
PNKP-209ENST00000596726 UBE2WQ96B02 151 aa13.99□□□□□ -0.17
PNKP-209ENST00000596726 COX11Q9Y6N1 276 aa13.99□□□□□ -0.17
PNKP-209ENST00000596726 Q0VG73 95 aa13.98□□□□□ -0.17
PNKP-209ENST00000596726 ENHOQ6UWT2 76 aa13.98□□□□□ -0.17
PNKP-209ENST00000596726 RMI2Q96E14 147 aa13.98□□□□□ -0.17
PNKP-209ENST00000596726 TMEM191AQ9H0A3 160 aa13.98□□□□□ -0.17
PNKP-209ENST00000596726 RAB14P61106 215 aa13.97□□□□□ -0.17
PNKP-209ENST00000596726 RBX1P62877 108 aa13.97□□□□□ -0.17
PNKP-209ENST00000596726 GAGE6Q13070 117 aa13.97□□□□□ -0.17
PNKP-209ENST00000596726 WFDC2Q14508 124 aa13.97□□□□□ -0.17
PNKP-209ENST00000596726 Q8N814 137 aa13.97□□□□□ -0.17
PNKP-209ENST00000596726 Q8N976 141 aa13.97□□□□□ -0.17
PNKP-209ENST00000596726 RPL39LQ96EH5 51 aaKnown RBP13.97□□□□□ -0.17
PNKP-209ENST00000596726 ANGP03950 147 aaKnown RBP13.96□□□□□ -0.17
PNKP-209ENST00000596726 NAT8BQ9UHF3 227 aa13.96□□□□□ -0.17
PNKP-209ENST00000596726 IGKV2D-24A0A075B6R9 120 aa13.95□□□□□ -0.18
PNKP-209ENST00000596726 SMIM27A0A1W2PRY6 76 aa13.95□□□□□ -0.18
PNKP-209ENST00000596726 RIGQ13278 110 aa13.95□□□□□ -0.18
PNKP-209ENST00000596726 NTN5Q8WTR8 489 aaPredicted RBP13.95□□□□□ -0.18
PNKP-209ENST00000596726 RNF185Q96GF1 192 aa13.95□□□□□ -0.18
PNKP-209ENST00000596726 TMEM243Q9BU79 118 aa13.95□□□□□ -0.18
PNKP-209ENST00000596726 COTL1Q14019 142 aa13.94□□□□□ -0.18
PNKP-209ENST00000596726 CLLU1Q5K131 121 aa13.94□□□□□ -0.18
PNKP-209ENST00000596726 PRR34Q9NV39 138 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms