RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 CLLU1Q5K131 121 aa10.78□□□□□ -0.68
USHBP1-206ENST00000596436 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
USHBP1-206ENST00000596436 OSTCQ9NRP0 149 aa10.78□□□□□ -0.68
USHBP1-206ENST00000596436 NAT8Q9UHE5 227 aa10.78□□□□□ -0.68
USHBP1-206ENST00000596436 EVI2AP22794 236 aa10.77□□□□□ -0.69
USHBP1-206ENST00000596436 WDR73Q6P4I2 378 aa10.77□□□□□ -0.69
USHBP1-206ENST00000596436 GTSF1LQ9H1H1 148 aa10.77□□□□□ -0.69
USHBP1-206ENST00000596436 TRBV10-1A0A0K0K1A3 114 aa10.76□□□□□ -0.69
USHBP1-206ENST00000596436 A8MWL6 223 aa10.76□□□□□ -0.69
USHBP1-206ENST00000596436 MGPP08493 103 aa10.76□□□□□ -0.69
USHBP1-206ENST00000596436 ADIRFQ15847 76 aa10.76□□□□□ -0.69
USHBP1-206ENST00000596436 V9GYV3 84 aa10.76□□□□□ -0.69
USHBP1-206ENST00000596436 F5H697 171 aa10.75□□□□□ -0.69
USHBP1-206ENST00000596436 SMIM17P0DL12 118 aa10.75□□□□□ -0.69
USHBP1-206ENST00000596436 INAFM2P0DMQ5 153 aa10.75□□□□□ -0.69
USHBP1-206ENST00000596436 LELP1Q5T871 98 aa10.75□□□□□ -0.69
USHBP1-206ENST00000596436 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
USHBP1-206ENST00000596436 OR10G8Q8NGN5 311 aa10.75□□□□□ -0.69
USHBP1-206ENST00000596436 PGLYRP4Q96LB8 373 aa10.75□□□□□ -0.69
USHBP1-206ENST00000596436 TRGC1P0CF51 173 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 DNAH10OSP0CZ25 163 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 FOXA3P55318 350 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-206ENST00000596436 UBE2D3P61077 147 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 UBE2D2P62837 147 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 TWIST1Q15672 202 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 SUMO4Q6EEV6 95 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
USHBP1-206ENST00000596436 TRBV7-3A0A075B6L6 115 aa10.73□□□□□ -0.69
USHBP1-206ENST00000596436 FUSP35637 526 aaKnown RBP eCLIP10.73□□□□□ -0.69
USHBP1-206ENST00000596436 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
USHBP1-206ENST00000596436 OR10J3Q5JRS4 329 aa10.73□□□□□ -0.69
USHBP1-206ENST00000596436 C15orf54Q8N8G6 183 aa10.73□□□□□ -0.69
USHBP1-206ENST00000596436 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
USHBP1-206ENST00000596436 A0A087WTM6 91 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 HIGD1CA8MV81 97 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 M0QY20 66 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 EREGO14944 169 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 KRTAP10-1P60331 282 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 Q5VSD8 79 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 NFE4Q86UQ8 179 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 TNFRSF18Q9Y5U5 241 aa10.72□□□□□ -0.69
USHBP1-206ENST00000596436 TRAV8-6A0A0B4J262 113 aa10.71□□□□□ -0.69
USHBP1-206ENST00000596436 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.69
USHBP1-206ENST00000596436 Q8N3U1 123 aa10.71□□□□□ -0.69
USHBP1-206ENST00000596436 FAM231BA6NCW3 169 aa10.7□□□□□ -0.7
USHBP1-206ENST00000596436 K7EP13 123 aa10.7□□□□□ -0.7
USHBP1-206ENST00000596436 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
USHBP1-206ENST00000596436 DNAH8Q96JB1 4490 aa10.7□□□□□ -0.7
USHBP1-206ENST00000596436 TRAV26-2A0A0B4J265 109 aa10.69□□□□□ -0.7
USHBP1-206ENST00000596436 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
USHBP1-206ENST00000596436 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
USHBP1-206ENST00000596436 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
USHBP1-206ENST00000596436 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
USHBP1-206ENST00000596436 NUP35Q8NFH5 326 aa10.69□□□□□ -0.7
USHBP1-206ENST00000596436 FRZBQ92765 325 aa10.69□□□□□ -0.7
USHBP1-206ENST00000596436 A0A087WWC5 75 aa10.68□□□□□ -0.7
USHBP1-206ENST00000596436 A0A1B0GUT8 65 aa10.68□□□□□ -0.7
USHBP1-206ENST00000596436 RASL11AQ6T310 242 aa10.68□□□□□ -0.7
USHBP1-206ENST00000596436 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
USHBP1-206ENST00000596436 H7C1H1 209 aa10.67□□□□□ -0.7
USHBP1-206ENST00000596436 GATD1Q8NB37 220 aa10.67□□□□□ -0.7
USHBP1-206ENST00000596436 BORCS7Q96B45 105 aa10.67□□□□□ -0.7
USHBP1-206ENST00000596436 FLG2Q5D862 2391 aaPredicted RBP10.66□□□□□ -0.7
USHBP1-206ENST00000596436 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
USHBP1-206ENST00000596436 ADCYAP1P18509 176 aa10.66□□□□□ -0.7
USHBP1-206ENST00000596436 NTM-AS1Q6ZSK4 140 aa10.66□□□□□ -0.7
USHBP1-206ENST00000596436 DNAJC30Q96LL9 226 aa10.66□□□□□ -0.7
USHBP1-206ENST00000596436 NAT8BQ9UHF3 227 aa10.66□□□□□ -0.7
USHBP1-206ENST00000596436 TRBV6-8A0A0A6YYG3 113 aa10.65□□□□□ -0.7
USHBP1-206ENST00000596436 SMIM15Q7Z3B0 74 aa10.65□□□□□ -0.7
USHBP1-206ENST00000596436 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
USHBP1-206ENST00000596436 NIT1Q86X76 327 aa10.65□□□□□ -0.7
USHBP1-206ENST00000596436 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
USHBP1-206ENST00000596436 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
USHBP1-206ENST00000596436 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
USHBP1-206ENST00000596436 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
USHBP1-206ENST00000596436 GCSHP23434 173 aa10.64□□□□□ -0.71
USHBP1-206ENST00000596436 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
USHBP1-206ENST00000596436 COMMD7Q86VX2 200 aa10.64□□□□□ -0.71
USHBP1-206ENST00000596436 RPL39LQ96EH5 51 aaKnown RBP10.64□□□□□ -0.71
USHBP1-206ENST00000596436 RNF185Q96GF1 192 aa10.64□□□□□ -0.71
USHBP1-206ENST00000596436 TMEM191AQ9H0A3 160 aa10.64□□□□□ -0.71
USHBP1-206ENST00000596436 IBA57-AS1B1ANH7 110 aa10.63□□□□□ -0.71
USHBP1-206ENST00000596436 PNRC1Q12796 327 aaPredicted RBP10.63□□□□□ -0.71
USHBP1-206ENST00000596436 RIGQ13278 110 aa10.63□□□□□ -0.71
USHBP1-206ENST00000596436 TMEM218A2RU14 115 aa10.62□□□□□ -0.71
USHBP1-206ENST00000596436 SMR3BP02814 79 aaPredicted RBP10.62□□□□□ -0.71
USHBP1-206ENST00000596436 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
USHBP1-206ENST00000596436 DEFB104AQ8WTQ1 72 aa10.62□□□□□ -0.71
USHBP1-206ENST00000596436 LINC00862A6NCI5 91 aa10.61□□□□□ -0.71
USHBP1-206ENST00000596436 LRCOL1A6NCL2 159 aa10.61□□□□□ -0.71
USHBP1-206ENST00000596436 RAB4AP20338 218 aa10.61□□□□□ -0.71
USHBP1-206ENST00000596436 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
USHBP1-206ENST00000596436 Q9HAA7 133 aa10.61□□□□□ -0.71
USHBP1-206ENST00000596436 PPP1R2P9O14990 202 aa10.6□□□□□ -0.71
USHBP1-206ENST00000596436 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.6□□□□□ -0.71
USHBP1-206ENST00000596436 A0A1B0GXF2 115 aa10.59□□□□□ -0.71
USHBP1-206ENST00000596436 F8W036 122 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms