RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 URGCP-MRPS24S4R325 110 aa10.56□□□□□ -0.72
ZNF550-207ENST00000595560 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
ZNF550-207ENST00000595560 TRAV8-3A0A0A6YYJ7 113 aa10.55□□□□□ -0.72
ZNF550-207ENST00000595560 LRCOL1A6NCL2 159 aa10.55□□□□□ -0.72
ZNF550-207ENST00000595560 TRGC1P0CF51 173 aa10.55□□□□□ -0.72
ZNF550-207ENST00000595560 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
ZNF550-207ENST00000595560 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.55□□□□□ -0.72
ZNF550-207ENST00000595560 FAM210AQ96ND0 272 aa10.55□□□□□ -0.72
ZNF550-207ENST00000595560 EIF5A2Q9GZV4 153 aaKnown RBP10.55□□□□□ -0.72
ZNF550-207ENST00000595560 DNAH5Q8TE73 4624 aa10.54□□□□□ -0.72
ZNF550-207ENST00000595560 H7C1H1 209 aa10.54□□□□□ -0.72
ZNF550-207ENST00000595560 MGPP08493 103 aa10.54□□□□□ -0.72
ZNF550-207ENST00000595560 NTF3P20783 257 aa10.54□□□□□ -0.72
ZNF550-207ENST00000595560 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
ZNF550-207ENST00000595560 M0QY20 66 aa10.53□□□□□ -0.72
ZNF550-207ENST00000595560 CEBPGP53567 150 aa10.53□□□□□ -0.72
ZNF550-207ENST00000595560 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
ZNF550-207ENST00000595560 SMIM7Q9BQ49 75 aa10.53□□□□□ -0.72
ZNF550-207ENST00000595560 DPH3P1Q9H4G8 78 aa10.53□□□□□ -0.72
ZNF550-207ENST00000595560 A0A087WX48 190 aa10.52□□□□□ -0.73
ZNF550-207ENST00000595560 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.73
ZNF550-207ENST00000595560 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
ZNF550-207ENST00000595560 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
ZNF550-207ENST00000595560 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
ZNF550-207ENST00000595560 PCLOQ9Y6V0 5065 aa10.52□□□□□ -0.73
ZNF550-207ENST00000595560 HSPG2P98160 4391 aa10.51□□□□□ -0.73
ZNF550-207ENST00000595560 ELOBQ15370 118 aa10.51□□□□□ -0.73
ZNF550-207ENST00000595560 CT83Q5H943 113 aa10.51□□□□□ -0.73
ZNF550-207ENST00000595560 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
ZNF550-207ENST00000595560 GTSF1Q8WW33 167 aa10.51□□□□□ -0.73
ZNF550-207ENST00000595560 A8MWL6 223 aa10.5□□□□□ -0.73
ZNF550-207ENST00000595560 GATCO43716 136 aaKnown RBP10.5□□□□□ -0.73
ZNF550-207ENST00000595560 SRP19P09132 144 aaKnown RBP10.5□□□□□ -0.73
ZNF550-207ENST00000595560 PKIAP61925 76 aa10.5□□□□□ -0.73
ZNF550-207ENST00000595560 TWIST1Q15672 202 aa10.5□□□□□ -0.73
ZNF550-207ENST00000595560 RASL11AQ6T310 242 aa10.5□□□□□ -0.73
ZNF550-207ENST00000595560 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
ZNF550-207ENST00000595560 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
ZNF550-207ENST00000595560 KLK12Q9UKR0 248 aa10.5□□□□□ -0.73
ZNF550-207ENST00000595560 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
ZNF550-207ENST00000595560 ZNF727A8MUV8 499 aa10.49□□□□□ -0.73
ZNF550-207ENST00000595560 TEX261Q6UWH6 196 aa10.49□□□□□ -0.73
ZNF550-207ENST00000595560 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
ZNF550-207ENST00000595560 Q8N814 137 aa10.49□□□□□ -0.73
ZNF550-207ENST00000595560 RMI2Q96E14 147 aa10.49□□□□□ -0.73
ZNF550-207ENST00000595560 APOBP04114 4563 aaKnown RBP10.48□□□□□ -0.73
ZNF550-207ENST00000595560 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
ZNF550-207ENST00000595560 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
ZNF550-207ENST00000595560 ATRAIDQ6UW56 229 aa10.48□□□□□ -0.73
ZNF550-207ENST00000595560 CHCHD5Q9BSY4 110 aa10.48□□□□□ -0.73
ZNF550-207ENST00000595560 TRBV25-1A0A075B6N4 114 aa10.47□□□□□ -0.73
ZNF550-207ENST00000595560 FOXA3P55318 350 aaPredicted RBP10.47□□□□□ -0.73
ZNF550-207ENST00000595560 Q0VG73 95 aa10.47□□□□□ -0.73
ZNF550-207ENST00000595560 IQCJQ1A5X6 159 aa10.47□□□□□ -0.73
ZNF550-207ENST00000595560 MAPKAPK5-AS1Q8N8E1 139 aa10.47□□□□□ -0.73
ZNF550-207ENST00000595560 UBE2WQ96B02 151 aa10.47□□□□□ -0.73
ZNF550-207ENST00000595560 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
ZNF550-207ENST00000595560 IGLV5-52A0A0A0MRZ9 124 aa10.46□□□□□ -0.73
ZNF550-207ENST00000595560 KRTAP10-1P60331 282 aa10.46□□□□□ -0.73
ZNF550-207ENST00000595560 WFDC2Q14508 124 aa10.46□□□□□ -0.73
ZNF550-207ENST00000595560 FRZBQ92765 325 aa10.46□□□□□ -0.73
ZNF550-207ENST00000595560 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 IGHV1-24A0A0C4DH33 117 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 GCSHP23434 173 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 FAM74A3Q4VXF1 159 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 SMIM15Q7Z3B0 74 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 OSTCQ9NRP0 149 aa10.45□□□□□ -0.74
ZNF550-207ENST00000595560 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
ZNF550-207ENST00000595560 ANGP03950 147 aaKnown RBP10.44□□□□□ -0.74
ZNF550-207ENST00000595560 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
ZNF550-207ENST00000595560 C15orf54Q8N8G6 183 aa10.44□□□□□ -0.74
ZNF550-207ENST00000595560 Q8N976 141 aa10.44□□□□□ -0.74
ZNF550-207ENST00000595560 GATD1Q8NB37 220 aa10.44□□□□□ -0.74
ZNF550-207ENST00000595560 HIGD1CA8MV81 97 aa10.43□□□□□ -0.74
ZNF550-207ENST00000595560 CRPP02741 224 aa10.43□□□□□ -0.74
ZNF550-207ENST00000595560 TMEM241Q24JQ0 296 aa10.43□□□□□ -0.74
ZNF550-207ENST00000595560 Q8N1X5 172 aa10.43□□□□□ -0.74
ZNF550-207ENST00000595560 BORCS7Q96B45 105 aa10.43□□□□□ -0.74
ZNF550-207ENST00000595560 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
ZNF550-207ENST00000595560 SMDT1Q9H4I9 107 aa10.43□□□□□ -0.74
ZNF550-207ENST00000595560 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 C9JQL5 133 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 LECT2O14960 151 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 RBX1P62877 108 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 GAGE6Q13070 117 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 PEA15Q15121 130 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 ISOC2Q96AB3 205 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 C1orf43Q9BWL3 253 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 V9GYV3 84 aa10.42□□□□□ -0.74
ZNF550-207ENST00000595560 ABCA13Q86UQ4 5058 aa10.41□□□□□ -0.74
ZNF550-207ENST00000595560 A0A1B0GUT8 65 aa10.41□□□□□ -0.74
ZNF550-207ENST00000595560 XGP55808 180 aa10.41□□□□□ -0.74
ZNF550-207ENST00000595560 RPL23P62829 140 aaKnown RBP10.41□□□□□ -0.74
ZNF550-207ENST00000595560 SRSF3P84103 164 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms