RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 A0A0J9YXV3 536 aa13.33□□□□□ -0.28
SPC24-206ENST00000592540 BRD3OSQ6XYD6 125 aa13.33□□□□□ -0.28
SPC24-206ENST00000592540 DCANP1Q8TF63 244 aa13.33□□□□□ -0.28
SPC24-206ENST00000592540 ABCA2Q9BZC7 2435 aa13.32□□□□□ -0.28
SPC24-206ENST00000592540 A0A0J9YXY3 114 aa13.32□□□□□ -0.28
SPC24-206ENST00000592540 IGHV4-39P01824 125 aa13.32□□□□□ -0.28
SPC24-206ENST00000592540 IGHG2P01859 326 aa13.32□□□□□ -0.28
SPC24-206ENST00000592540 ZNF580Q9UK33 172 aa13.32□□□□□ -0.28
SPC24-206ENST00000592540 CELSR1Q9NYQ6 3014 aa13.32□□□□□ -0.28
SPC24-206ENST00000592540 NHLRC4P0CG21 123 aaPredicted RBP13.31□□□□□ -0.28
SPC24-206ENST00000592540 FOXC1Q12948 553 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 LY6EQ16553 131 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 LINC01600Q96MT4 127 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 AKAP6Q13023 2319 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 IGLV4-3A0A075B6K6 122 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 SNCGO76070 127 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 GAGE5Q13069 117 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 GAGE6Q13070 117 aa13.31□□□□□ -0.28
SPC24-206ENST00000592540 PRRC2AP48634 2157 aaKnown RBP13.31□□□□□ -0.28
SPC24-206ENST00000592540 TRAV4A0A0B4J268 109 aa13.3□□□□□ -0.28
SPC24-206ENST00000592540 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
SPC24-206ENST00000592540 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
SPC24-206ENST00000592540 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
SPC24-206ENST00000592540 TRBV30A0A0K0K1B3 111 aa13.3□□□□□ -0.28
SPC24-206ENST00000592540 I3L3M4 83 aa13.3□□□□□ -0.28
SPC24-206ENST00000592540 BEX4Q9NWD9 120 aaPredicted RBP13.3□□□□□ -0.28
SPC24-206ENST00000592540 COL6A6A6NMZ7 2263 aa13.3□□□□□ -0.28
SPC24-206ENST00000592540 TRAV12-2A0A075B6T6 113 aa13.29□□□□□ -0.28
SPC24-206ENST00000592540 CRLF1O75462 422 aa13.29□□□□□ -0.28
SPC24-206ENST00000592540 TRBV10-2A0A0K0K1G8 114 aa13.29□□□□□ -0.28
SPC24-206ENST00000592540 TEX49A0A1B0GTD5 131 aa13.29□□□□□ -0.28
SPC24-206ENST00000592540 TRIAP1O43715 76 aa13.29□□□□□ -0.28
SPC24-206ENST00000592540 RPL13AP40429 203 aaKnown RBP13.29□□□□□ -0.28
SPC24-206ENST00000592540 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
SPC24-206ENST00000592540 LITAFQ99732 161 aa13.28□□□□□ -0.28
SPC24-206ENST00000592540 SS18L2Q9UHA2 77 aa13.28□□□□□ -0.28
SPC24-206ENST00000592540 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
SPC24-206ENST00000592540 ADARB2-AS1A8MUL3 147 aa13.28□□□□□ -0.28
SPC24-206ENST00000592540 ODF3Q96PU9 254 aa13.28□□□□□ -0.28
SPC24-206ENST00000592540 SPXQ9BT56 116 aa13.28□□□□□ -0.28
SPC24-206ENST00000592540 K7EMT4 169 aa13.27□□□□□ -0.28
SPC24-206ENST00000592540 IGKV3-20P01619 116 aa13.27□□□□□ -0.28
SPC24-206ENST00000592540 NDUFV3P56181 108 aaKnown RBP13.27□□□□□ -0.28
SPC24-206ENST00000592540 BLCAPP62952 87 aa13.27□□□□□ -0.28
SPC24-206ENST00000592540 TRAV8-4A0A0B4J246 113 aa13.27□□□□□ -0.29
SPC24-206ENST00000592540 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
SPC24-206ENST00000592540 IGHV1OR15-1A0A075B7D0 117 aa13.26□□□□□ -0.29
SPC24-206ENST00000592540 TIMM21Q9BVV7 248 aa13.26□□□□□ -0.29
SPC24-206ENST00000592540 B5MCH6 92 aa13.25□□□□□ -0.29
SPC24-206ENST00000592540 H3BUX3 64 aa13.25□□□□□ -0.29
SPC24-206ENST00000592540 KLRB1Q12918 225 aa13.25□□□□□ -0.29
SPC24-206ENST00000592540 A6NDX4 124 aa13.25□□□□□ -0.29
SPC24-206ENST00000592540 H3BMM0 161 aa13.25□□□□□ -0.29
SPC24-206ENST00000592540 PRSS2P07478 247 aa13.25□□□□□ -0.29
SPC24-206ENST00000592540 UBE2WQ96B02 151 aa13.25□□□□□ -0.29
SPC24-206ENST00000592540 FAM104AQ969W3 186 aa13.24□□□□□ -0.29
SPC24-206ENST00000592540 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
SPC24-206ENST00000592540 IGHV4-38-2P0DP08 117 aa13.24□□□□□ -0.29
SPC24-206ENST00000592540 MRPS36P82909 103 aaKnown RBP13.24□□□□□ -0.29
SPC24-206ENST00000592540 Q6Q795 121 aa13.24□□□□□ -0.29
SPC24-206ENST00000592540 ICOSQ9Y6W8 199 aa13.24□□□□□ -0.29
SPC24-206ENST00000592540 CD28P10747 220 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 TTC32Q5I0X7 151 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 ADAMTSL4-AS1Q5T5F5 129 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 C2orf82Q6UX34 121 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 PYGO1Q9Y3Y4 419 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 ATRXP46100 2492 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 VPS13CQ709C8 3753 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 IFITM1P13164 125 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 SPINK13Q1W4C9 94 aa13.23□□□□□ -0.29
SPC24-206ENST00000592540 H7C423 109 aa13.22□□□□□ -0.29
SPC24-206ENST00000592540 C15orf53Q8NAA6 179 aa13.22□□□□□ -0.29
SPC24-206ENST00000592540 SPANXDQ9BXN6 97 aa13.22□□□□□ -0.29
SPC24-206ENST00000592540 SPANXCQ9NY87 97 aa13.22□□□□□ -0.29
SPC24-206ENST00000592540 IGHV1-58A0A0C4DH39 117 aa13.21□□□□□ -0.29
SPC24-206ENST00000592540 HIVEP3Q5T1R4 2406 aa13.21□□□□□ -0.3
SPC24-206ENST00000592540 SNRPD3P62318 126 aaKnown RBP13.21□□□□□ -0.3
SPC24-206ENST00000592540 CFHR3Q02985 330 aa13.21□□□□□ -0.3
SPC24-206ENST00000592540 NDUFA12Q9UI09 145 aa13.21□□□□□ -0.3
SPC24-206ENST00000592540 CEMP1Q6PRD7 247 aaPredicted RBP13.2□□□□□ -0.3
SPC24-206ENST00000592540 GAGE12JA6NER3 117 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 GAGE7O76087 117 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 NBL1P41271 181 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 GAGE4Q13068 117 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 MIAQ16674 131 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 DOPEY2Q9Y3R5 2298 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 H3BT86 120 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 CCDC179H3BU77 68 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 COX6CP09669 75 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 Q6ZSV7 163 aa13.19□□□□□ -0.3
SPC24-206ENST00000592540 RNASE13Q5GAN3 156 aaKnown RBP13.18□□□□□ -0.3
SPC24-206ENST00000592540 K7EQG2 157 aa13.18□□□□□ -0.3
SPC24-206ENST00000592540 NPC2P61916 151 aa13.18□□□□□ -0.3
SPC24-206ENST00000592540 VSIG2Q96IQ7 327 aa13.18□□□□□ -0.3
SPC24-206ENST00000592540 SORL1Q92673 2214 aa13.18□□□□□ -0.3
SPC24-206ENST00000592540 MUC6Q6W4X9 2439 aa13.17□□□□□ -0.3
SPC24-206ENST00000592540 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms