RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, human

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2E-208	ENST00000591709		P01737	135 aa		11.2	□□□□□ -0.62
POLR2E-208	ENST00000591709	LINC00694	P0DN24	101 aa		11.2	□□□□□ -0.62
POLR2E-208	ENST00000591709	WFDC2	Q14508	124 aa		11.2	□□□□□ -0.62
POLR2E-208	ENST00000591709	LYPD6B	Q8NI32	183 aa		11.2	□□□□□ -0.62
POLR2E-208	ENST00000591709	BIN3	Q9NQY0	253 aa		11.2	□□□□□ -0.62
POLR2E-208	ENST00000591709	RPS20	P60866	119 aa	Known RBP	11.19	□□□□□ -0.62
POLR2E-208	ENST00000591709	ZNF56	Q15929	161 aa		11.19	□□□□□ -0.62
POLR2E-208	ENST00000591709	FER1L6-AS1	Q8NA97	138 aa		11.19	□□□□□ -0.62
POLR2E-208	ENST00000591709	IGHV3-30	P01768	117 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	IGHV3-33	P01772	117 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	IGHV3-30-3	P0DP02	117 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	IGHV3-30-5	P0DP03	117 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	CEBPG	P53567	150 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	LINC01620	Q4KN68	170 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	TOR2A	Q5JU69	321 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	OCC1	Q8TAD7	63 aa		11.18	□□□□□ -0.62
POLR2E-208	ENST00000591709	PKHD1L1	Q86WI1	4243 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	XKRY2	A2RUG3	117 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	IBA57-AS1	B1ANH7	110 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	IGLC6	P0CF74	106 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	RAB4B	P61018	213 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	LINC01556	Q5JQF7	62 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	NUDT10	Q8NFP7	164 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	NUDT11	Q96G61	164 aa		11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709	EIF5A2	Q9GZV4	153 aa	Known RBP	11.17	□□□□□ -0.62
POLR2E-208	ENST00000591709		F5H697	171 aa		11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709	TMEM250	H0YL14	139 aa		11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709		K7EN84	100 aa		11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709	SMIM17	P0DL12	118 aa		11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709	RPL36A	P83881	106 aa	Known RBP	11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709	RPL36AL	Q969Q0	106 aa	Known RBP	11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709	AP1S3	Q96PC3	154 aa		11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709	RNASE7	Q9H1E1	156 aa	Known RBP	11.16	□□□□□ -0.62
POLR2E-208	ENST00000591709	TRBV10-1	A0A0K0K1A3	114 aa		11.15	□□□□□ -0.62
POLR2E-208	ENST00000591709	LECT2	O14960	151 aa		11.15	□□□□□ -0.62
POLR2E-208	ENST00000591709		A0A087WWC5	75 aa		11.14	□□□□□ -0.63
POLR2E-208	ENST00000591709	CACNG7	P62955	275 aa		11.14	□□□□□ -0.63
POLR2E-208	ENST00000591709	LYZL1	Q6UWQ5	148 aa		11.14	□□□□□ -0.63
POLR2E-208	ENST00000591709		Q8N3U1	123 aa		11.14	□□□□□ -0.63
POLR2E-208	ENST00000591709	FAM210A	Q96ND0	272 aa		11.14	□□□□□ -0.63
POLR2E-208	ENST00000591709	TRBV7-3	A0A075B6L6	115 aa		11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709		F2Z2F3	143 aa		11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709	MGP	P08493	103 aa		11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709	UBE2D3	P61077	147 aa		11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709	UBE2D2	P62837	147 aa		11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709	NEXN-AS1	Q8NBZ9	246 aa		11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709	RPP21	Q9H633	154 aa	Known RBP	11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709	KIF25-AS1	Q9Y6Z4	181 aa		11.13	□□□□□ -0.63
POLR2E-208	ENST00000591709	RNF213	Q63HN8	5207 aa		11.12	□□□□□ -0.63
POLR2E-208	ENST00000591709	OR10G8	Q8NGN5	311 aa		11.11	□□□□□ -0.63
POLR2E-208	ENST00000591709	SMIM7	Q9BQ49	75 aa		11.11	□□□□□ -0.63
POLR2E-208	ENST00000591709	CHAC1	Q9BUX1	264 aa		11.11	□□□□□ -0.63
POLR2E-208	ENST00000591709	GATC	O43716	136 aa	Known RBP	11.1	□□□□□ -0.63
POLR2E-208	ENST00000591709	NTF3	P20783	257 aa		11.1	□□□□□ -0.63
POLR2E-208	ENST00000591709	TEX261	Q6UWH6	196 aa		11.1	□□□□□ -0.63
POLR2E-208	ENST00000591709	CIRBP-AS1	Q8TBR5	109 aa		11.1	□□□□□ -0.63
POLR2E-208	ENST00000591709	SRP19	P09132	144 aa	Known RBP	11.09	□□□□□ -0.63
POLR2E-208	ENST00000591709	TRGC1	P0CF51	173 aa		11.09	□□□□□ -0.63
POLR2E-208	ENST00000591709	CTRL	P40313	264 aa		11.09	□□□□□ -0.63
POLR2E-208	ENST00000591709	DAZ4	Q86SG3	579 aa	Known RBP	11.09	□□□□□ -0.63
POLR2E-208	ENST00000591709	TM2D2	Q9BX73	214 aa		11.09	□□□□□ -0.63
POLR2E-208	ENST00000591709	DAZ3	Q9NR90	486 aa	Known RBP	11.09	□□□□□ -0.63
POLR2E-208	ENST00000591709	URGCP-MRPS24	S4R325	110 aa		11.09	□□□□□ -0.63
POLR2E-208	ENST00000591709	ZNF727	A8MUV8	499 aa		11.08	□□□□□ -0.64
POLR2E-208	ENST00000591709	HNRNPA3	P51991	378 aa	Known RBP	11.08	□□□□□ -0.64
POLR2E-208	ENST00000591709	LAGE3	Q14657	143 aa		11.08	□□□□□ -0.64
POLR2E-208	ENST00000591709	TWIST1	Q15672	202 aa		11.08	□□□□□ -0.64
POLR2E-208	ENST00000591709	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.08	□□□□□ -0.64
POLR2E-208	ENST00000591709	LRP2	P98164	4655 aa		11.08	□□□□□ -0.64
POLR2E-208	ENST00000591709	NDUFS6	O75380	124 aa	Known RBP	11.07	□□□□□ -0.64
POLR2E-208	ENST00000591709	SUMO4	Q6EEV6	95 aa		11.07	□□□□□ -0.64
POLR2E-208	ENST00000591709	WDR73	Q6P4I2	378 aa		11.07	□□□□□ -0.64
POLR2E-208	ENST00000591709	FAM231D	Q6ZW35	169 aa		11.07	□□□□□ -0.64
POLR2E-208	ENST00000591709	NIT1	Q86X76	327 aa		11.07	□□□□□ -0.64
POLR2E-208	ENST00000591709	GTSF1	Q8WW33	167 aa		11.07	□□□□□ -0.64
POLR2E-208	ENST00000591709	DPH3P1	Q9H4G8	78 aa		11.07	□□□□□ -0.64
POLR2E-208	ENST00000591709	TRBV6-8	A0A0A6YYG3	113 aa		11.06	□□□□□ -0.64
POLR2E-208	ENST00000591709		M0QY20	66 aa		11.06	□□□□□ -0.64
POLR2E-208	ENST00000591709	LINC01551	Q86U37	167 aa		11.06	□□□□□ -0.64
POLR2E-208	ENST00000591709		A0A087WX48	190 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709		A8MWL6	223 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	TMEM262	E9PQX1	116 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709		H7C1H1	209 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	MT1HL1	P0DM35	61 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	RPL37A	P61513	92 aa	Known RBP	11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	KCNIP4	Q6PIL6	250 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	BAALC	Q8WXS3	180 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	PGLYRP4	Q96LB8	373 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	CNFN	Q9BYD5	112 aa		11.05	□□□□□ -0.64
POLR2E-208	ENST00000591709	KLK12	Q9UKR0	248 aa		11.04	□□□□□ -0.64
POLR2E-208	ENST00000591709	TRAV8-3	A0A0A6YYJ7	113 aa		11.03	□□□□□ -0.64
POLR2E-208	ENST00000591709		C9JQL5	133 aa		11.03	□□□□□ -0.64
POLR2E-208	ENST00000591709	SRSF3	P84103	164 aa	Known RBP	11.03	□□□□□ -0.64
POLR2E-208	ENST00000591709	RASL11A	Q6T310	242 aa		11.03	□□□□□ -0.64
POLR2E-208	ENST00000591709	DNAJC30	Q96LL9	226 aa		11.03	□□□□□ -0.64
POLR2E-208	ENST00000591709	CHCHD5	Q9BSY4	110 aa		11.03	□□□□□ -0.64
POLR2E-208	ENST00000591709	PEA15	Q15121	130 aa		11.02	□□□□□ -0.65
POLR2E-208	ENST00000591709	TMEM241	Q24JQ0	296 aa		11.02	□□□□□ -0.65
POLR2E-208	ENST00000591709	CT83	Q5H943	113 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms