RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CIDEAO60543 219 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 PPP1R17O96001 155 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 TRGC1P0CF51 173 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 SLAQ13239 276 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 ESRGQ1W209 222 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 ZFAND2AQ8N6M9 145 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 FER1L6-AS1Q8NA97 138 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 NHLRC2Q8NBF2 726 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 Q8TAT8 98 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 SGK494Q96LW2 274 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 GNB1LQ9BYB4 327 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 HSPG2P98160 4391 aa6.52□□□□□ -1.37
BRCA1-226ENST00000591534 NACAE9PAV3 2078 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 TRAV12-3A0A0B4J271 114 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 PGPEP1LA6NFU8 196 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 EPM2AB3EWF7 344 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 RAB5AP20339 215 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 HBBP68871 147 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 ELOBQ15370 118 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 ANXA2RQ3ZCQ2 193 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 NFE4Q86UQ8 179 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 C18orf15Q96N68 181 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 SPXQ9BT56 116 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 PHLDA3Q9Y5J5 127 aa6.51□□□□□ -1.37
BRCA1-226ENST00000591534 IGHV1OR15-1A0A075B7D0 117 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 J3KRW8 73 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 SIVA1O15304 175 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 SMIM17P0DL12 118 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 CTRLP40313 264 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 RAB5BP61020 215 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 ZNF415Q09FC8 603 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 ZFP82Q8N141 532 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 PTH2Q96A98 100 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 CNFNQ9BYD5 112 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 URGCP-MRPS24S4R325 110 aa6.5□□□□□ -1.37
BRCA1-226ENST00000591534 TRGV1A0A0A0MS02 117 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 K7EP13 123 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 PPBPP02775 128 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 NPSP0C0P6 89 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 RPS10P46783 165 aaKnown RBP6.49□□□□□ -1.37
BRCA1-226ENST00000591534 SPANXN1Q5VSR9 72 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 ATRAIDQ6UW56 229 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 Q6ZTI0 123 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 CBLN2Q8IUK8 224 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 NUP35Q8NFH5 326 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 KRTAP1-5Q9BYS1 174 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 NAGKQ9UJ70 344 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 ICOSQ9Y6W8 199 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
BRCA1-226ENST00000591534 A0A096LPF7 62 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 ZNF324O75467 553 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-226ENST00000591534 CRIP1P50238 77 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 LINC00315P59091 139 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 KRTAP10-2P60368 255 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 RAB4BP61018 213 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 DGAT2L7PQ6IED9 249 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 AP1S3Q96PC3 154 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 GSN-AS1Q9NRJ2 163 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 TRAPPC1Q9Y5R8 145 aa6.48□□□□□ -1.37
BRCA1-226ENST00000591534 COLCA2A8K830 154 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 RHODO00212 210 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 SNAI2O43623 268 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 S100A6P06703 90 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 MRPL23Q16540 153 aaKnown RBP6.47□□□□□ -1.37
BRCA1-226ENST00000591534 Q6ZQT7 251 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 TPPP3Q9BW30 176 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 PRO0255Q9UI72 69 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 DNAH5Q8TE73 4624 aa6.47□□□□□ -1.37
BRCA1-226ENST00000591534 A8MWV9 139 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 H7C1H1 209 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 M0R2P5 195 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 SPINK4O60575 86 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 NXPH4O95158 308 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 APCSP02743 223 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 IGLC6P0CF74 106 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 INAFM2P0DMQ5 153 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 G0S2P27469 103 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 ZNF80P51504 273 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-226ENST00000591534 TCL1AP56279 114 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 TWIST1Q15672 202 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 PRR9Q5T870 116 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 VSIG2Q96IQ7 327 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 PGLYRP4Q96LB8 373 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 TMEM191AQ9H0A3 160 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 HHLA3Q9XRX5 114 aa6.46□□□□□ -1.38
BRCA1-226ENST00000591534 IGKV3D-20A0A0C4DH25 116 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 TCAPO15273 167 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 ARMS2P0C7Q2 107 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 EVI2AP22794 236 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 LYZL1Q6UWQ5 148 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 NEGR1Q7Z3B1 354 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-226ENST00000591534 GATD1Q8NB37 220 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 C11orf72Q8NBR9 251 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 YPEL4Q96NS1 127 aa6.45□□□□□ -1.38
BRCA1-226ENST00000591534 TMSB15BA0A087X1C1 80 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms